Os01g0119100

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0119100| Description = Protein of unknown function DUF563 family protein| Version = NM_001048399.2 GI:297595987 GeneID:4326083| Length = 34...")
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Gene Name

Os01g0119100

Description

Protein of unknown function DUF563 family protein

Version

NM_001048399.2 GI:297595987 GeneID:4326083

Length

3422 bp

Definition

Oryza sativa Japonica Group Os01g0119100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1088893..1092314

Sequence Coding Region

1089194..1090434,1091019..1091264,1091407..1091632

Expression

GEO Profiles:Os01g0119100

Genome Context

<gbrowseImage1> name=NC_008394:1088893..1092314 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1088893..1092314 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aaaagatttgttttctttctttcgttcttttcccctttagatttgggccacaatgcatcagcgttggaggggaagaagaaagatgagacttttgctaaggatagcggtgatgcaagcgtgtctgcttccacagatgaggctcttgccaaggatgatgacgcaattgtcggtgctgttcttcctcccttgtcatcagaggaacccacaaacatcacacaggattcagttcttgaggatgaggagctgaaagtccaggagactgctcctgctactactaatccttctccggagaagagcagcaacaatggcagctccccctctgtggttccatccgaccctgctactctccctgttcagcagattcctcctactcaagaggcaaaggatcctcctgctcagcaaattccagctgttccagaggccaaagttcctcctgttcagcagattccaacatttccagtggttaagacagattcagaggcggcgccgcggcggaaggagtggaagccgctgtgcgatctctggtcgaaccgccgcatcgactggtgcgagctcgacggcgacgtccgcgtcgccggcgccaacggcaccgtctccctggtggcgccgccggggcccgccgacgagcgcacgttccgcgccgagtcgtggcacatcaagccgtacccgcgcaaggccgacccgaacgccatgcgccacgtccgcgtgctgacggtgcagtcgctgcccgccccggcggcgagcgcggcggcgccggcgtgcacggagcggcacgacgtccccgggcttgtgttctccgaccgcgggtacaccggcaactacttccacgcgtacaccgacgtcatcctgccgctgttcctgacggcgaggcagtactccggcgaggtgaagctgctggtgtccgacttccagatgtggtggctcggcaagttcttgccggtgttcaaggccgtctccaactacgacctcatcaacctcgacgacgaccgccgcgtccactgcttccgccacgtccaggtcggcctgacatgccacgccgacttcagcatcgacccgtcgcgcgcgcccaacggctactccatggtggacttcacccgcttcatgcgcgccacctaccgcctgccccgcgacgcgccgttcccggcgtccggcgagcagcagccgcggcggccatggcggccgcgtctcctggtgatcgcgcgcgcccgcacgcggcggttcgtgaacgccgacgagatcgtgcgaggcgcggagcgcgccgggttcgaggtggtggtgtcggagggcgagcacgaggtggcgccgttcgcggagctcgccaacacgtgcgacgccatggtgggcgtgcacggcgcggggctgacgaacatggtgttcctccccaccggcggcgtggtgatccaggtggtgccgctgggcgggctggagttcgtcgccggctacttccgcgggccgtccagggacatggggctccggtacctggagtaccggatcacgccggaggagagcacgctgatcgatcagtacccgcgagaccaccccatcttcaccgaccccgatggcgtcaagtccaaaggctggaattctctcaaggaagcctacctcgacaagcaggatgttcgtctcgacatgaagaggttccgaccaatcctcaagaaggccattgctcacctccgcaagaacagcggcaacaataacaccacacacaactag</cdnaseq>

Protein Sequence

<aaseq>KRFVFFLSFFSPLDLGHNASALEGKKKDETFAKDSGDASVSAST DEALAKDDDAIVGAVLPPLSSEEPTNITQDSVLEDEELKVQETAPATTNPSPEKSSNN GSSPSVVPSDPATLPVQQIPPTQEAKDPPAQQIPAVPEAKVPPVQQIPTFPVVKTDSE AAPRRKEWKPLCDLWSNRRIDWCELDGDVRVAGANGTVSLVAPPGPADERTFRAESWH IKPYPRKADPNAMRHVRVLTVQSLPAPAASAAAPACTERHDVPGLVFSDRGYTGNYFH AYTDVILPLFLTARQYSGEVKLLVSDFQMWWLGKFLPVFKAVSNYDLINLDDDRRVHC FRHVQVGLTCHADFSIDPSRAPNGYSMVDFTRFMRATYRLPRDAPFPASGEQQPRRPW RPRLLVIARARTRRFVNADEIVRGAERAGFEVVVSEGEHEVAPFAELANTCDAMVGVH GAGLTNMVFLPTGGVVIQVVPLGGLEFVAGYFRGPSRDMGLRYLEYRITPEESTLIDQ YPRDHPIFTDPDGVKSKGWNSLKEAYLDKQDVRLDMKRFRPILKKAIAHLRKNSGNNN TTHN</aaseq>

Gene Sequence

<dnaseqindica>1881..3121#1051..1296#683..908#gaggtcgagagcggtggcggcggcggccatggagggcggtggcaaggcggggtacagctatggcggccaccaccaccaccaggacgccaagctgctcaagaacctcagccgggtggagccccgccggttcggcctcggcctcgtcgccgggttcctcatcgtcacctgcgcctacttctccaccgccaagttcgacgccatccacatcgccatgagtacgcccgcccatctcctcctcctcctcctcacgcatctccatgcctacctgtgtatctcactcttgtcgccatggattcttgcagtaagctctccagccaagaatgcagctgggtttatgaacgcttcttctgacggctccaatcagcagcagctaggtgagcaagcggcgattcattcgtcccgacaggttcactcgctgtactaatcgaggagttgacgaactgtctcttgttcatctctcctccctgcttagatttggaccgagatgcaatgtccagggaagggagcaaggctcaggtgctcgacacagacggcgacgacaagatttcctctttggggccaggtaaacaactccaactcgcaatcatttgcagatcattttgcttgcgcatggatcgaattcgaatttggtgtgttgctttggtacttctactggctcacacgcaaagttcagacaatctgaaaaagatttgttttctttctttcgttcttttcccctttagatttgggccacaatgcatcagcgttggaggggaagaagaaagatgagacttttgctaaggatagcggtgatgcaagcgtgtctgcttccacagatgaggctcttgccaaggatgatgacgcaattgtcggtgctgttcttcctcccttgtcatcagaggaacccacaaacatcacacaggattcaggtaaaaaaaaaaaaaacacaaccaattgaacttctctgaagtaaccaggatgagatgttttcccccctcttcatttctgtcagaaatgggaaatgcaggatttttaacaagctgtttttttgttcttcttcttcttggtcagttcttgaggatgaggagctgaaagtccaggagactgctcctgctactactaatccttctccggagaagagcagcaacaatggcagctccccctctgtggttccatccgaccctgctactctccctgttcagcagattcctcctactcaagaggcaaaggatcctcctgctcagcaaattccagctgttccagaggccaaagttcctcctgttcagcagattccaacatttccagtggttaagacaggtatctagttcctccttacttttccttgtgttttccttgtgctaaaaaaagatgccttttttatttgcgaaaatgccaagtactactggcatactgctggtctttttagctacacatttgaaacctacagtagaacacatttgagattttgagcacaaattctcgttgcaagtagcaaaggcatgtacatggagtagttgcaaaatgtggattgtggagactagtttttggacacacatttttgatgtcttgcctatcccaacgcaaggcccaacgttcttcttgctgttctgttctggaccacctttttttgttttcatcctgtgccttgttcacctttcttgagaggagagcaatttaagagtaataaagcatcatcatcccatggccttagcttattgatagcccccattttctagtgtctttcatttgattatcatctcaccatttctcatctcgtagggtctacaacaacattgttttttgtgttcttaatttggttgcgaatctacaatctttcttgctgcatttctgggtcataattaacatgcaacgtggtttgattgattgatggtcctcccaagattcagaggcggcgccgcggcggaaggagtggaagccgctgtgcgatctctggtcgaaccgccgcatcgactggtgcgagctcgacggcgacgtccgcgtcgccggcgccaacggcaccgtctccctggtggcgccgccggggcccgccgacgagcgcacgttccgcgccgagtcgtggcacatcaagccgtacccgcgcaaggccgacccgaacgccatgcgccacgtccgcgtgctgacggtgcagtcgctgcccgccccggcggcgagcgcggcggcgccggcgtgcacggagcggcacgacgtccccgggcttgtgttctccgaccgcgggtacaccggcaactacttccacgcgtacaccgacgtcatcctgccgctgttcctgacggcgaggcagtactccggcgaggtgaagctgctggtgtccgacttccagatgtggtggctcggcaagttcttgccggtgttcaaggccgtctccaactacgacctcatcaacctcgacgacgaccgccgcgtccactgcttccgccacgtccaggtcggcctgacatgccacgccgacttcagcatcgacccgtcgcgcgcgcccaacggctactccatggtggacttcacccgcttcatgcgcgccacctaccgcctgccccgcgacgcgccgttcccggcgtccggcgagcagcagccgcggcggccatggcggccgcgtctcctggtgatcgcgcgcgcccgcacgcggcggttcgtgaacgccgacgagatcgtgcgaggcgcggagcgcgccgggttcgaggtggtggtgtcggagggcgagcacgaggtggcgccgttcgcggagctcgccaacacgtgcgacgccatggtgggcgtgcacggcgcggggctgacgaacatggtgttcctccccaccggcggcgtggtgatccaggtggtgccgctgggcgggctggagttcgtcgccggctacttccgcgggccgtccagggacatggggctccggtacctggagtaccggatcacgccggaggagagcacgctgatcgatcagtacccgcgagaccaccccatcttcaccgaccccgatggcgtcaagtccaaaggctggaattctctcaaggaagcctacctcgacaagcaggatgttcgtctcgacatgaagaggttccgaccaatcctcaagaaggccattgctcacctccgcaagaacagcggcaacaataacaccacacacaactagccatttcgaatttttcttcgatcgatcgccatggatgcatcaatgtacaccatcttcttgatcttttaatcttttcttcttcttttactatcttttcactagtaagtaaaagtagactgtagcagctagcagatcgaccaaatgtatgatatttcagaggaggagatcagcagcaatactatattcatctctttgttttttttttatctcgattggaagatgagtttcatgagtggtagttgagttgatcatgtatactcctatagtagccaaaacccaaaaaagtgtacgaggcttaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0119100, RefSeq:Os01g0119100