Os01g0121100

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Revision as of 04:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0121100| Description = Similar to SLL2| Version = NM_001048408.1 GI:115434229 GeneID:4326040| Length = 3182 bp| Definition = Oryza sativa ...")
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Gene Name

Os01g0121100

Description

Similar to SLL2

Version

NM_001048408.1 GI:115434229 GeneID:4326040

Length

3182 bp

Definition

Oryza sativa Japonica Group Os01g0121100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1182466..1185647

Sequence Coding Region

1182467..1182545,1182751..1182817,1183024..1183152,1183582..1183716,1184296..1184392
,1184633..1184736,1184924..1184975,1185261..1185458

Expression

GEO Profiles:Os01g0121100

Genome Context

<gbrowseImage1> name=NC_008394:1182466..1185647 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1182466..1185647 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gggctagggctagggtttgaggtcgggcgcgcgcggcatggcggggatacggtggccgcccgaggacccggagatcttcccgccgcctccggccccgccgccgccacgacggcgtcggtcgccgccaacccctccggagatttcagctttgacaaggacgtgccagactccgccgatatggagccgccgttgctgggcctgccgaattatcatcaggatggttcttatgcagaataccttgctaattttcaagaacggagccacacagatgactggtttggcacggagaacatggatgtcctcgtaagctggacgaaaaacttatgttccaacaaggatttgcgtagctgcagtgtactcgacataggaactgggagcggtcgactctcgcaacagcttgcaaagcaagggttctctgatctgactgggatcgaccacagtgaaggtgcaattgaggttgctcgtaatcttgctatccgtgatgggtttgagcacattaatttcttggttgatgatgtgttagagtcaaagttggagaggagatttgaacttgtgatggatgaaggaactctggacacgattgggttgcaccccgatggacctgtaaagagaatgatgtattggcagtcggttgcagggctggtttctcctggtggcatactggtcatcacatcatgtagcagaaccaaggatgagttggtccaggaggtagagagcttcaaccagagaaagctcagtgctatgggctccgaaggtgcgcaggccagtgatactgcggtgttcaagtacatcgaccatgtccaaacgtaccccatcgtggatagttcctgcatcacgaccgttgctttctcgcatagctga</cdnaseq>

Protein Sequence

<aaseq>GLGLGFEVGRARHGGDTVAARGPGDLPAASGPAAATTASVAANP SGDFSFDKDVPDSADMEPPLLGLPNYHQDGSYAEYLANFQERSHTDDWFGTENMDVLV SWTKNLCSNKDLRSCSVLDIGTGSGRLSQQLAKQGFSDLTGIDHSEGAIEVARNLAIR DGFEHINFLVDDVLESKLERRFELVMDEGTLDTIGLHPDGPVKRMMYWQSVAGLVSPG GILVITSCSRTKDELVQEVESFNQRKLSAMGSEGAQASDTAVFKYIDHVQTYPIVDSS CITTVAFSHS</aaseq>

Gene Sequence

<dnaseqindica>2..80#286..352#559..687#1117..1251#1831..1927#2168..2271#2459..2510#2796..2993#agggctagggctagggtttgaggtcgggcgcgcgcggcatggcggggatacggtggccgcccgaggacccggagatcttcccgtcgaggatggtgaccggcggcggcggcgggggcgcgggaggaggaccccccgggcccccgggggagatggcctccgacgacgaccggtcggtggcggcggactcgtggtccatcaagagcgactacgggagcaccctcgacgacgagcagcggtacgccgacgccgccgaggtcctcctcgcctcctcctcctcctcctccgccgccgcctccggccccgccgccgccacgacggcgtcggtcgccgccaacccctccggagatttcaggttaagagcgatccgtttctacggtttaattgctttgttgtgcccgtgatctgatttccttgtgttggggggaagaagaggggggcgttctgtcgcgctgtatcatgcgatttagtccaacgatctctcggtaattacattttagtcctcaagagatgatcatttttggtatgcttacctgactcggcgttgtgaatgtcgaacagctttgacaaggacgtgccagactccgccgatatggagccgccgttgctgggcctgccgaattatcatcaggatggttcttatgcagaataccttgctaattttcaagaacggagccacacagatgactggtcagattcttctcttcacctgctgtgcacatatggatagagtgtagatctcctcatcgaatttttgttgtagctttgttcacaacatgatgggaataacaaggaacataactaagttattgcctcactagggaatgcaaaacacgttagcattatagtaatatctaccaacatgtagtttcgataacagccaatgcctatcgagtgttgtcttctagctaaggttgcctggttcccactgcccattggccaaattaaattcagaacttttagacttgtcttttccctatctactagctactatggatggactacttttttttttgcagcaatgttccattttaagggtaaaaaggcagaaaatcttcattttctgcttcaatcattatatcgctggttatgatgaaagtctaacttgtatgcatgtaggtttggcacggagaacatggatgtcctcgtaagctggacgaaaaacttatgttccaacaaggatttgcgtagctgcagtgtactcgacataggaactgggagcggtcgactctcgcaacagcttgcaaagcaagggtatgttgatgaaatggcaatcttccatttgcatttctccaaccaaaggttactttaatgtgaatgctgttattgttgtcaacttcaatgtattggtgttgagatgcctttcttaacgttttctgacagccctgaaatagacttattgtctattcttttgctcttgcgtttgtgctccttctctcttgtgtttgtgttccttctatataattagagtatgaatttggagttgtaaagtttggtaccataaggcaagtataattgatttagttaagcagacctatcaatttcccaatggtctttctatcacatgcttaaaatctggccatctttgtaaattgaagggagatgccctttgataattattcttggaagctgcatctggtttgctgttaagcaaaggatcatgctagcacagtctcatgttttctttttctcgaatagctatatgttttgtagattgggagaaacatctctattgacttggagtatttttataaattaggagacattcaactatgtatttcactctgttgaattgttaatgcctcttgacagtactgatatgtccatatacaggttctctgatctgactgggatcgaccacagtgaaggtgcaattgaggttgctcgtaatcttgctatccgtgatgggtttgagcacattaatttcttggtgagttgagcactggaccatttggtgcatatgcctgtatctgtatgcttcacaatttcatgttcttattttgctttaacgtataatgtgcacatccatgaccttctggttgtatcttagataccaaaacaacatctttcaaggttgtacagctaattatcaactcccttgaacaaagagctttaaagcggaaagaggaggaaagagctgattcagcttacatgaatcttgctcttgcaggttgatgatgtgttagagtcaaagttggagaggagatttgaacttgtgatggatgaaggaactctggacacgattgggttgcaccccgatggacctgtaaagaggtaatgcgtgcgaagctgttgatgtatgctttaatccctcatggtaaattatcataaattttgatacaccgcataatatttaggagtgacttggtactctcaattgcttaggttgtttaaactggcatggatcacactgcttgttggtttccatgtgttaaactattttcaatttactccatttcagaatgatgtattggcagtcggttgcagggctggtttctcctggtggcatactggtcagtacttccaccacattcaacccaaatatctttgtgttgcatggtggctcacttgcaacaaaattcgaacagtttactgtggtgaaactatttgctttacatattctacctacggaaattaccaatttaatatctacatatgatgttctgtttaacttttaataatcctgtgtaatctacatggtttcaccattacagtaactatttgaaagccatgtatgtgaagatggcttaggacaaagaatgtgtcaagcctctgatgctactttcacatgtgtttaggtcatcacatcatgtagcagaaccaaggatgagttggtccaggaggtagagagcttcaaccagagaaagctcagtgctatgggctccgaaggtgcgcaggccagtgatactgcggtgttcaagtacatcgaccatgtccaaacgtaccccatcgtggatagttcctgcatcacgaccgttgctttctcgcatagctgaaacatatatgtatgctctctctttttctccctaactttgccatcccagtgtgtatcccctttaccctagttctcttcgggtgatagtctactttgccagataggttattcagttgtaacgttgctttgttatgtcttgaattcttgatggatgtactcttttgaaagcgtgacaagcaacactattaca</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0121100, RefSeq:Os01g0121100