Os01g0127200

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0127200| Description = Cupredoxin domain containing protein| Version = NM_001185228.1 GI:297719590 GeneID:9267869| Length = 3366 bp| Defin...")
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Gene Name

Os01g0127200

Description

Cupredoxin domain containing protein

Version

NM_001185228.1 GI:297719590 GeneID:9267869

Length

3366 bp

Definition

Oryza sativa Japonica Group Os01g0127200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1496241..1499606

Sequence Coding Region

1496543..1496596,1496686..1498152

Expression

GEO Profiles:Os01g0127200

Genome Context

<gbrowseImage1> name=NC_008394:1496241..1499606 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1496241..1499606 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatgcttgcgcatgcagcaattccaccgcgacatgccaccgacgccggtgttcgtgtacgggcaatcgctgcagacagcgacgttcccggggcccaccatcgtggcgcggcagggcgtgccgctcgccgtggagtggcagaaccacctccccgacgcccacatcctcccgtgggaccccaaggtccccaccgccatccccaagaagggcggcgtccccaccgtcgttcacctccacggcggcgcccacccgccggagttcgacggccacgccttcgcctggttcacccgcgacttcgccgagaacggcagcacatggacgcggaagacctacacctaccccaacgtgcaggcgccgggcaacctctggtaccacgaccacgccctcggcctcacccgcgtcagcctcctcgccggcctcctcgccgcctacgtcatcgagaagcccgagctcgaggaccccatgaacctcccctgcggcgaccacgacctccacctcgtcatcgccgaccgcgagttctacaccaatggctccatctccatcgaccgggagtggaagccggagtacttcggcctcgtcatcaccgtcaacggcaaggcgtggccgtacctcagcgtccagcgccgccgctaccgcctccgcatcctcaacgccagcaacgccagatacttcaacgtcacgctctccaatggcgccctccccttcaccgtcattggctccgactcctcctacctctccaggccggtcaccgtctccaacctcgtcctctcgccggccgagatcttcgacgtcatcgtcgacttctcccggttgccggcggcgatgaccgagatcgagatgctcaacacggcgccctacccgttccccaacggccctaatgtgacggacccgaacctcgacgggaaggtgatgctgttcaaggtcgccggcaaggggaaggtcgacgacatgccggacaaatccaaggtgccggagcacggcgtgccgtacgcgagcgtggcggcgctcccgccgccgacgacgacgaggtacatcgtcctgtacgagaaccagaccgcgccggggaacctctacatcaacggcctccggctggaggacccggtgacggagacgcccaagtccggcacgacggagctgtggcaggtgatcaacctcaccggcgacaaccacccgctgcacctccacattgccacgttccaggccatcaagatgacgaagatcgagggattccaggtgttcaaggactgcatgatcaaaaacaacaacaccgccacgtgcaacctcgaccagcacgccgtcgggcccgtcgtgccggtgccggaggaggagaagacgtggaagaacgcggtgaagattccgccggagttcatgacgtcggtggtggtggcgttcaggcttgtcgaggccaatcagccctaccccttcgacgccaccaccgagccgggattcgtctaccactgccacatcctggatcacgaagacaacgccatgatcaggcctctgaagctgcttccatga</cdnaseq>

Protein Sequence

<aaseq>MGCLRMQQFHRDMPPTPVFVYGQSLQTATFPGPTIVARQGVPLA VEWQNHLPDAHILPWDPKVPTAIPKKGGVPTVVHLHGGAHPPEFDGHAFAWFTRDFAE NGSTWTRKTYTYPNVQAPGNLWYHDHALGLTRVSLLAGLLAAYVIEKPELEDPMNLPC GDHDLHLVIADREFYTNGSISIDREWKPEYFGLVITVNGKAWPYLSVQRRRYRLRILN ASNARYFNVTLSNGALPFTVIGSDSSYLSRPVTVSNLVLSPAEIFDVIVDFSRLPAAM TEIEMLNTAPYPFPNGPNVTDPNLDGKVMLFKVAGKGKVDDMPDKSKVPEHGVPYASV AALPPPTTTRYIVLYENQTAPGNLYINGLRLEDPVTETPKSGTTELWQVINLTGDNHP LHLHIATFQAIKMTKIEGFQVFKDCMIKNNNTATCNLDQHAVGPVVPVPEEEKTWKNA VKIPPEFMTSVVVAFRLVEANQPYPFDATTEPGFVYHCHILDHEDNAMIRPLKLLP</aaseq>

Gene Sequence

<dnaseqindica>3011..3064#1455..2921#gatcagtcgatcagctaatctctttctcctttaattcattatcctttgcatgcccctctccagctagctaaggtgacaaaaactgacatcactgcttgattagctacttaattacttatttcgtcttaaaatatagttatgtttattttcaattagctacgaatctaaatagtactgacattgctgcacgatatggccagaaacttagaatgcaatcaactattgtaaaatgtatactgatttttgtcttgttgattgcgtgcagatgagtccgaggattcagcagctggccgctgtgttgttggcggctgttgtcgtcgtcgcagccgccagggatgaacctgcagcagcaaaaaattaccaaactcaatgggatacagtaatgtcaatacttaactgtaagagtgattctttaatcccaagctacatctgcagcgtgattagcaaaagtcgctggggttgggcgtcagatgaccccaacgacgacgagtacacaccaccggatcatccgctgccggcgccggcggcggggcggcggcggtggccggtgatgacgagcttgaacctgacaaagtacgtggactcgctgccgcggattgccaagatccggggctacggcatccgccatggccgtccagtgcccatcaagctcaccatcggcatgtacagcaagacatgggtacgtacgttgtgattacgggaaaatatatatctaatatccagaccaacgtatatagtgaagacatgtaaactaccattaaattaagaaaaatatatacgcttgagatttatccatattatcataagtaaaactgttattcatgattaaatctgggagtaaaaatttcaattttggtgtcatgaacaaatcttagatatttatttttagatccaacaatatactaccttcattttttattagatgatatatatgacttttgaaattatgtttgactatttgtcttattactaaaaaataataaataatgtaaatatgctaaaatttaccggtaagaaaataaaaaaggactacctatatatgtgaaagtttcatataaattatattatatactccctctatttcagttatatactccctctatttcagttataagacattttgactttgagtcaaagtgctctaagtttgattaagcttgtaaaaatagcaataacattttcaacccaagacaattttattatgaaaatatattcaattattgatttgataaaaactagtttagtattattaatattactatatttgtctatgaacttaaataaatttgaaacagtttaattttgaccaaagtcagtacatctatagaagttacaatgtagctatattatacggttaaatatatttatgtctatcgaactttcaagaaaaaaaaagaactttcaagaaaaaaaatatcaataaacatgtagcaaaatcgaaaaataatttcaaaatgggatgcttgcgcatgcagcaattccaccgcgacatgccaccgacgccggtgttcgtgtacgggcaatcgctgcagacagcgacgttcccggggcccaccatcgtggcgcggcagggcgtgccgctcgccgtggagtggcagaaccacctccccgacgcccacatcctcccgtgggaccccaaggtccccaccgccatccccaagaagggcggcgtccccaccgtcgttcacctccacggcggcgcccacccgccggagttcgacggccacgccttcgcctggttcacccgcgacttcgccgagaacggcagcacatggacgcggaagacctacacctaccccaacgtgcaggcgccgggcaacctctggtaccacgaccacgccctcggcctcacccgcgtcagcctcctcgccggcctcctcgccgcctacgtcatcgagaagcccgagctcgaggaccccatgaacctcccctgcggcgaccacgacctccacctcgtcatcgccgaccgcgagttctacaccaatggctccatctccatcgaccgggagtggaagccggagtacttcggcctcgtcatcaccgtcaacggcaaggcgtggccgtacctcagcgtccagcgccgccgctaccgcctccgcatcctcaacgccagcaacgccagatacttcaacgtcacgctctccaatggcgccctccccttcaccgtcattggctccgactcctcctacctctccaggccggtcaccgtctccaacctcgtcctctcgccggccgagatcttcgacgtcatcgtcgacttctcccggttgccggcggcgatgaccgagatcgagatgctcaacacggcgccctacccgttccccaacggccctaatgtgacggacccgaacctcgacgggaaggtgatgctgttcaaggtcgccggcaaggggaaggtcgacgacatgccggacaaatccaaggtgccggagcacggcgtgccgtacgcgagcgtggcggcgctcccgccgccgacgacgacgaggtacatcgtcctgtacgagaaccagaccgcgccggggaacctctacatcaacggcctccggctggaggacccggtgacggagacgcccaagtccggcacgacggagctgtggcaggtgatcaacctcaccggcgacaaccacccgctgcacctccacattgccacgttccaggccatcaagatgacgaagatcgagggattccaggtgttcaaggactgcatgatcaaaaacaacaacaccgccacgtgcaacctcgaccagcacgccgtcgggcccgtcgtgccggtgccggaggaggagaagacgtggaagaacgcggtgaagattccgccggagttcatgacgtcggtggtggtggcgttcaggcttgtcgaggccaatcagccctaccccttcgacgccaccaccgagccgggattcgtctaccactgccacgtaagcgccacgtcatatgctcgacgtgcccgttcgttatcgtgttcattgatcagttgctccatttctaatttattttgactgtgcagatcctggatcacgaagacaacgccatgatcaggcctctgaagctgcttccatgaacaagaaacgtagtgctgatcgatgagaatatgagatgaagaagcttcttcactaggattaataattctgagcatttacgtttgagtgaaagttgtttatgttatgttatccaagtctttgtttatgagtgaaagtttgctagtcataaactggtgcgctctgacggggtatctgtgctacggacttaatttgggtttgtactttattggaagttatatatgaattatgttgttgattgttgaagtacactgtacaaaataatatagcttatttcaggaaataaattttaatccttcaaggg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0127200, RefSeq:Os01g0127200