Os01g0128200

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0128200| Description = Similar to Nuclease I| Version = NM_001048445.1 GI:115434303 GeneID:4325994| Length = 3321 bp| Definition = Oryza s...")
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Gene Name

Os01g0128200

Description

Similar to Nuclease I

Version

NM_001048445.1 GI:115434303 GeneID:4325994

Length

3321 bp

Definition

Oryza sativa Japonica Group Os01g0128200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1565147..1568467

Sequence Coding Region

1565166..1565306,1565408..1565579,1567023..1567124,1567234..1567373,1567478..1567570
,1567648..1567715,1567806..1567879,1567987..1568123

Expression

GEO Profiles:Os01g0128200

Genome Context

<gbrowseImage1> name=NC_008394:1565147..1568467 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1565147..1568467 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcactcgcagcgcctctgctccgcctccggctgctgcctctcgccgccttcgtctccgtcgtctccctcaccgcggcgcctcggcgtgcggaggcgtggggcaagcagggccacatcatcgtctgcaagatcgccgagaagtacctgtcggagaaggcggcggcggcggtggaggagctgctgccggagtcggccggcggggagctgtcgacggtgtgcccgtgggccgacgaggtgcgattccactactactggtctcgtcctctccactacgccaacaccccccaagtctgcaacttcaagtactcacgggactgccataattctcgtcaccagcaagggatgtgcgttgtcggggctatcaacaactacaccgatcagctctacagctatggcgattcaaagagttcatacaacctgacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcacgtcggcttcgaggaagacgaagggggcaacaccatcaaagtgcactggtaccggaggaaggaaaaccttcaccatgtgtgggacaacagcatcatagagacggccatgaaggacttctataacagaagcttggataccatggtggaggctctcaagatgaacctcacagatggatggtctgaagatatcagtcactgggaaaattgtggcaacaaaaaggaaacctgtgcaaatgactatgcaattgagagcatacatctgtcctgcaattatgcctacaaagatgttgagcaagacattactctaggagatgactatttctactctcggtacccaatcgtggagaagaggctagcacaggccggcatcagattggcgttgatactgaaccggatatttggtgaggataaaccagatggtaatgtcataccattacaagttcagtaa</cdnaseq>

Protein Sequence

<aaseq>MALAAPLLRLRLLPLAAFVSVVSLTAAPRRAEAWGKQGHIIVCK IAEKYLSEKAAAAVEELLPESAGGELSTVCPWADEVRFHYYWSRPLHYANTPQVCNFK YSRDCHNSRHQQGMCVVGAINNYTDQLYSYGDSKSSYNLTESLMFLAHFVGDVHQPLH VGFEEDEGGNTIKVHWYRRKENLHHVWDNSIIETAMKDFYNRSLDTMVEALKMNLTDG WSEDISHWENCGNKKETCANDYAIESIHLSCNYAYKDVEQDITLGDDYFYSRYPIVEK RLAQAGIRLALILNRIFGEDKPDGNVIPLQVQ</aaseq>

Gene Sequence

<dnaseqindica>20..160#262..433#1877..1978#2088..2227#2332..2424#2502..2569#2660..2733#2841..2977#gagctgaccaccaccggagatggcactcgcagcgcctctgctccgcctccggctgctgcctctcgccgccttcgtctccgtcgtctccctcaccgcggcgcctcggcgtgcggaggcgtggggcaagcagggccacatcatcgtctgcaagatcgccgaggtctccgcacaccatggctttgctaatccccttcctcctctcctcgcacagcacctgaagaggctgcagctagagagtaacacggagtgttgtacttgcagaagtacctgtcggagaaggcggcggcggcggtggaggagctgctgccggagtcggccggcggggagctgtcgacggtgtgcccgtgggccgacgaggtgcgattccactactactggtctcgtcctctccactacgccaacaccccccaagtctgcaacttcaagtactcacgtacgtcttcactcacctccacaatcttagcttcaaattttcttcttttaagataacgacttaattatagctgcaaatgaacgctgcatttacagaatacaaattgatcgttcaaagcgagcttaattgcgcgccattggttgcaaaccaggctgagcgagagaacgctttgcgttattctttttttctctgttcaaaacaattaattagcacttcctccatttcataatgtaagactttctagcattgctcatatttatataaatgttaatgaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtatagatttactaatatctatataaatgttagcaatactaaaaaattttacaatatgaaacggatggagtagtagcagtaacgtttttgggtttttcttgagtgtagagtggctctgcccttctcgctctgttaggagttatgtttagccgccgtagtagtttaattagccttccttgcttcaatttttgttttgctttttctcccttcccttggcataagccggtctggtgattacgttgtgtaataaaaactttttttcttcttatatattaacgtgcaatccttttgcgctagcgaaaaaaaaatcagtaacagtatgagcagcaagtacgtcagcgtagatgccattagcccattctgaattattccctatcgaatatccaaattataccggcacgtactgttgcttgttggggaggacaaacaatcagagaaagaggttgagtaaagatacacaactcaaactctcatcacagacagattcagagtctcacggcatcaccaatgattcgatccactaatttccttgttccaaaccacaacgaattcatgttgcattcaatcagtagctttcaccataaaaaccagacatctgtcgtaattgtgcatgtaaaatgaatgtttagactccaaggaagaaaaaaaaggacatactaacaacaggaatctgacgacttgattataataattgcgtgttctctgcttcttctcgttcttaatatctcgagaaatatcttccaaactttgttagcacgttcttatgggaccaggaatgtgccgctgacagtctgacagagacagtcacacatgtgcccacacagacctgttgttaattattactagtatagttcagagataatcctaaccactggatatgttgtttgtggtcttcaatggaatgataaagtttgctaattggagcagctgaccttaactgaggtatacattaataattcagcattccatggtgaaatctgccactctgattagatgatagcagagatgagtagagctaaggcacaaacatttctctgatttctgaaacatgagctttactttcatcatggagtaatctgcttgtggctctcaattatccaggggactgccataattctcgtcaccagcaagggatgtgcgttgtcggggctatcaacaactacaccgatcagctctacagctatggcgattcaaagagttcatgtaagcttatctgcaaaacacagtgccaaatagtgctctgattcagcaggcaggacactgatccgatgatctctgaacatccatacacatgcactgattgataaaccagacaacctgacggagagcctgatgttcctggcccacttcgtcggcgacgtgcaccagccgctgcacgtcggcttcgaggaagacgaagggggcaacaccatcaaagtgcactggtaccggaggaaggaaaaccttcaccatgtctgtactgcttctctcatgtcatgtcaactgaattattcagatcagcacaaactgccatttttcactcacaagatttctgtgttcatgtgctgcttttacaggtgtgggacaacagcatcatagagacggccatgaaggacttctataacagaagcttggataccatggtggaggctctcaagatgaacctcacagtgagagcacagacatgtaaaatgatttatcagttcagaaatgcttttccagtttctgatgtttgtgtaaattgtaggatggatggtctgaagatatcagtcactgggaaaattgtggcaacaaaaaggaaacctgtgcaaatgagtaatgatatatcctgctcaaacacttccacctgtctagtacatttttaaagagaaattgacatgcattgtttaactcaatgtcatgcagctatgcaattgagagcatacatctgtcctgcaattatgcctacaaagatgttgagcaagacattactctaggaggtgagtatacttctttatatcacagtggttgtgactaaaactagtacaagaagtcattttgggcttagggcaataataattggcaaattctgcatcctggaatacagatgactatttctactctcggtacccaatcgtggagaagaggctagcacaggccggcatcagattggcgttgatactgaaccggatatttggtgaggataaaccagatggtaatgtcataccattacaagttcagtaagggttatgatcaccagaaatattcaggagaaatgttatttgttgctgccactctaattagtggttgtgcacatattttataaaaagcacacatacctatagtatagaattcaaaaatgtaattgttgtaattgcttattggaaagcacatttatttgtaagaagcacataggcctagtacagcattcaaaactgtaaatgctgtcattcatgtacaattgaaagtagtctgtgacaagaaacacataagcctagtatagcattcataaatgtaattgttgtaattcctctatgtttgaacagtgtaccacttgaataagtgtgtttcaaatcgattcatttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0128200, RefSeq:Os01g0128200