Os01g0128400

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Revision as of 04:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0128400| Description = Conserved hypothetical protein| Version = NM_001048447.1 GI:115434307 GeneID:4325966| Length = 5073 bp| Definition ...")
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Gene Name

Os01g0128400

Description

Conserved hypothetical protein

Version

NM_001048447.1 GI:115434307 GeneID:4325966

Length

5073 bp

Definition

Oryza sativa Japonica Group Os01g0128400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1570524..1575596

Sequence Coding Region

1570942..1571178,1571525..1571656,1571737..1571816,1571919..1572048,1572136..1572268
,1572376..1572497,1572612..1572749,1573493..1573678,1574576..1574713
,1575068..1575532

Expression

GEO Profiles:Os01g0128400

Genome Context

<gbrowseImage1> name=NC_008394:1570524..1575596 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1570524..1575596 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggacgacctcgccggctcatcctcctcctcctccgcgatggacgccgtggtcgccgacccctcgcacgggtggcagaaggtcacctaccccaagcgccaccgcaagcagggggcggcggcgctgccctccgcggctgctcccgatctggggttcctgcccaacggcggcggcaaggtcaacgtgttcgaggccgtcgacaggaacgccgagaagcgccaccgcgcgctcctggccgccagggacgcggccgaccccgacgccgcgcggatcgccgccgccacggcctccgcgtactctgacgacgacgacgactccgacgaggcgcaggcgactcgccccgagggggaggtgaagaagcccaaggtgaagaagccgaagaagcccaaggtgacggtcgccgaggcggccgctctgatcgacgccgagaacctcgcggcgcatctcgtgcagatctcggaatcttacgagaaccagcaggatattcagctcatgcggttcgccgactactttggcaggtcatttgcaagcgtgagcgccgcccagttcccctgggcgaagatgttcaaggaatcactagtgtccaagatggttgatattcccttgtgccatattcctgaaccagttcgcaacacagcgagtgactggatcaatcagagatctcctgatgccctgggagactttgtcatgtggtgcatagacagcatcatgtctgaactgtcaggtcaagcagtaggcgctaagggttcaaagaaggccgcacagcaaactccaagggcccaggttgcaatatttgttgtgcttgccttgactgtaagaaggaaaccagaggtactaacaaacgtcctgccaaaaataatgggaaacaataagtatcttgggcaggaaaagcttccaatcattgtttgggttattgctcaggcatctcaaggtgacctagtgactggaatgttttgttgggctcatttcctgtttcccacactgtgtgctaagccaagtgggaatccccagacgagagatttagttctgcagttgctcgaaagaattttgtctgcccccaaagctcgaggcatcttactgaatggtgctgttagaaagggggaacgcctgattccccctgttacatttgatctgttcatgagagctgcatttcctgtttccagcgctcgtgtaaaggctacagagaggtttgaagcagcctacccaacaatcaaggagttggcccttgctggtcctcctggctcaaaaaccgtgaaacaagcagcacagcagcttttgccattgtgtgtgaaagcaatgcaagaaaataacgcagacctcaccggggagtctgctggtgtattcatttggtgcctgactcaaaatgcagagtcctacaagctgtgggaaagacttcatcctgaaaatgttgaagccagtgttgtagtccttagcactatagtcacaaaatggagcgagctgtctcataagctcagtgctgaatctcttaaggtgactctgaagaacttaaggactaagaatgaggcggccctagaagcagcaacggactctggaaagcaggcatctatcaaggccgcggacaagtattccaaggagatccttggaaggttgagccgcggcggagcctgcctgaagggcagcctgctggttatcacgcttgctgttgccgcaggctttgtgctatctcctaacctggagatcccatccgactgggacaagctccaggccatggtggcgtctcacctgtcgttctag</cdnaseq>

Protein Sequence

<aaseq>MAMDDLAGSSSSSSAMDAVVADPSHGWQKVTYPKRHRKQGAAAL PSAAAPDLGFLPNGGGKVNVFEAVDRNAEKRHRALLAARDAADPDAARIAAATASAYS DDDDDSDEAQATRPEGEVKKPKVKKPKKPKVTVAEAAALIDAENLAAHLVQISESYEN QQDIQLMRFADYFGRSFASVSAAQFPWAKMFKESLVSKMVDIPLCHIPEPVRNTASDW INQRSPDALGDFVMWCIDSIMSELSGQAVGAKGSKKAAQQTPRAQVAIFVVLALTVRR KPEVLTNVLPKIMGNNKYLGQEKLPIIVWVIAQASQGDLVTGMFCWAHFLFPTLCAKP SGNPQTRDLVLQLLERILSAPKARGILLNGAVRKGERLIPPVTFDLFMRAAFPVSSAR VKATERFEAAYPTIKELALAGPPGSKTVKQAAQQLLPLCVKAMQENNADLTGESAGVF IWCLTQNAESYKLWERLHPENVEASVVVLSTIVTKWSELSHKLSAESLKVTLKNLRTK NEAALEAATDSGKQASIKAADKYSKEILGRLSRGGACLKGSLLVITLAVAAGFVLSPN LEIPSDWDKLQAMVASHLSF</aaseq>

Gene Sequence

<dnaseqindica>4419..4655#3941..4072#3781..3860#3549..3678#3329..3461#3100..3221#2848..2985#1919..2104#884..1021#65..529#cgcaactcgctcatctcatcgctctcgcctcgactcgcctccacgaagcccacctcgactcgccatggccatggacgacctcgccggctcatcctcctcctcctccgcgatggacgccgtggtcgccgacccctcgcacgggtggcagaaggtcacctaccccaagcgccaccgcaagcagggggcggcggcgctgccctccgcggctgctcccgatctggggttcctgcccaacggcggcggcaaggtcaacgtgttcgaggccgtcgacaggaacgccgagaagcgccaccgcgcgctcctggccgccagggacgcggccgaccccgacgccgcgcggatcgccgccgccacggcctccgcgtactctgacgacgacgacgactccgacgaggcgcaggcgactcgccccgagggggaggtgaagaagcccaaggtgaagaagccgaagaagcccaaggtgacggtcgccgaggcggccgctctgatcgacgccgagaacctcgcggcgcatctcgtgcagatctcggtaatacccgtcctgtttcgctgaattcctcttcggaaatcgtcagatctcgacttgtttggactggatcatatttttgtctttttgttaaggatcggatctgatgagggtttagtgctggatcgttcgggttttttcaaaattccgacaaaatgttgggtgtctactagttttcgattaagatggaggaaaattctggtcgtaccagaaagttgggatctccttgatgtaaaaacacgggatcttgggatcttggaaagcatgggggttttggtgcaactattagatcttttaacgtgtcatagctcttttctgttttgttccgtagattctaaccctctgttctgtgtgcaggaatcttacgagaaccagcaggatattcagctcatgcggttcgccgactactttggcaggtcatttgcaagcgtgagcgccgcccagttcccctgggcgaagatgttcaaggaatcactagtgtccaagatggttgatgtgagttactagagttgccctaactcttttacgcatagagatattgcatttggaccagatataaaaaggcaattgcagtttatagggtgattcacttgcatcacatatgaaatgttactgcggtttatctgattgttaagttcttatgatctttttcttgtatctacttacaaattttacgaaaattaatggttgtgcatgaacattgatactgattcatgcatcgtcatcattgagttgtgaaatgctaatgctgcttttggtaactgccagtaatattattcgaattatttgcagacttgacgtcgctgtaaacgtgcttgtcaagtatgctagttttaaggatggttatgctatttctgctcaccctgtggatgcattatcaattaaaacaaattatttccgaacacgattattcatgtataacaggatacagctggataagttcaatgcaattactgcaacaacttgagtttacatttaacggtttacctgaaatccgcattgtccaaaaatctttctgtatttgtgacatggtattgtgttcagttccttccattttccgctctgaaagggggaggcgtggaggcaagttaatttggaaggtggggggttggtgcggattgtagtatgaggagtaaatgggtgtatcagggtacacattaattggattagcatggaatttcttagcctctaataaatcggaagcgattgcttgataaatatgcaatatgtttcattccagaaaagaaacgacacatactcgtgcaattaataattcagtgtattaatggattctagtacttctgttttgattttataagcatgaaaatgtccctttatttccgtgtctctctatttttagatttgcatctaactagttaatatattgtgcagattcccttgtgccatattcctgaaccagttcgcaacacagcgagtgactggatcaatcagagatctcctgatgccctgggagactttgtcatgtggtgcatagacagcatcatgtctgaactgtcaggtcaagcagtaggcgctaagggttcaaagaaggccgcacagcaaactccaagggcccaggtagtccttgttcgatcacgacttaactctcactatacaagcctctgcatggtatcatggacttgtgatgtaaagcagcataaaaatgctctacaagatggaaatagcatgcgttttatatttgcgatatgtcctatattgtattcacatcaactgagcctagcgctaatgctgtcatctaatgaagcaacaaccttgcaatgagaaaaaaaaatgtaggctttgcaattgaaatattatatgaacaatttgctcacatcctgcattgctggaagcttgtgcttgtcaataccatttactttagatagatgtgaatgtttctgattgtgtaattcaattagtttagccttttctcattgcttttaacacttcctcacaagaagtaagataataagcagattcgattcgattcgatcatttgtattagtttattactccgatctatggatcaccacgattgctaaaaagtttatataaattctaagaagaactgcattttgatgacagaatattcaagtcctactttatgtaaggtgttcatgaaggagattaaacttttttttttctgttttagggccctgaagattgcatggtggtagatatgataaaacctaaaatgctgatctaataatctgactgccataattcacacttgcttatcggacctgtgattgtaattatggatggttctatcttgttttcaagttggtttatagtttttaaatgactattgctctgttcaggttgcaatatttgttgtgcttgccttgactgtaagaaggaaaccagaggtactaacaaacgtcctgccaaaaataatgggaaacaataagtatcttgggcaggaaaagcttccaatcattgtttgggttattgctcaggtatattttccctgctgtgctcttacttgttctgaatggtgctaattattttcagtgctccatactatcattttatattttcttaaaaaatatctcttgcgtgatgtatcataggcatctcaaggtgacctagtgactggaatgttttgttgggctcatttcctgtttcccacactgtgtgctaagccaagtgggaatccccagacgagagatttagttctgcagttgctcgaaaggtatggctcaacttaaacctgattaagaatctagagccgtttttctgttttctgatatatatcagaagtatttatatgcataatcttttttgatatttcacgtgcagaattttgtctgcccccaaagctcgaggcatcttactgaatggtgctgttagaaagggggaacgcctgattccccctgttacatttgatctgttcatgagagctgcatttcctgtttccagcgctcgtgtaaaggtttgttcttaattcttccttcctgtttgctgaaattttgatatgcgatgatgttctgacttctggtcatcatatggaactctttaggctacagagaggtttgaagcagcctacccaacaatcaaggagttggcccttgctggtcctcctggctcaaaaaccgtgaaacaagcagcacagcagcttttgccattgtgtgtgaaagcaatgcaagaaagtgagctgtcatcctttttcaccctaacttctctttctatatagagcttgttacctttgttttgcaactctgagttgttgcattattgcacattatgttcagataacgcagacctcaccggggagtctgctggtgtattcatttggtgcctgactcaaaatgcagagtcctacaagctgtgggtgagtaatctttgtctgtctgcctttataacaccaagtgagaatgttgcaactgaagttttcttaattctgatttgcaggaaagacttcatcctgaaaatgttgaagccagtgttgtagtccttagcactatagtcacaaaatggagcgagctgtctcataagctcagtgctgaatctcttaaggtgactctgaagaacttaaggactaaggtatgatatgtccctgttgcattacttgttttgtttgactgtttatgatgtttgtttcattcttatgtatatgcaatgtgatgctatcctttgcatagtagtaaaattctgtatgactagtgaattctgattcatgacaaaaagagagcttcttgatagcacaattagtttgggataaatggcgttacctcctttttttttttgataaaatggaaatcaaggtgccacaactcttaaggacatgcaaaagcaagtaaacttgtttgacaccaccacctttagctgttcacataccccctaggtatttgtactccgtagtaatatgtgcaattggttgcaattgcagaatgaggcggccctagaagcagcaacggactctggaaagcaggcatctatcaaggccgcggacaagtattccaaggagatccttggaaggttgagccgcggcggagcctgcctgaagggcagcctgctggttatcacgcttgctgttgccgcaggctttgtgctatctcctaacctggagatcccatccgactgggacaagctccaggccatggtggcgtctcacctgtcgttctagaagtatatttgtccagcagttgataaaagcttatacagagaatccaaaggagatgaagtgaagattctaggagtgaatgaagaaggctaataagaagggatagatcctagaaaagaatacagttacctttttcgcatcttttcccaagcccgtagttggggggagatgcaagcaactttgcagagatagagagttaaaaagttttaatcgggttagactgatcggtcagaagaaggaaaggttgggccaaatggttcggcctgaggactaacaccacctttgctctatctcgtttttctgcatctgcagcatctcagatgatgagaaacatttttgcttcttttgtttttcctttttcttctgaatcttgtttgcttttaccaacatgccatgtgtgatattattgctgaatcatctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0128400, RefSeq:Os01g0128400