Os01g0134500

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0134500| Description = Similar to Delta-7-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta7-sterol-C5-desaturase)|...")
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Gene Name

Os01g0134500

Description

Similar to Delta-7-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5 sterol desaturase) (Delta7-sterol-C5-desaturase)

Version

NM_001048479.1 GI:115434371 GeneID:4325687

Length

3738 bp

Definition

Oryza sativa Japonica Group Os01g0134500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1887525..1891262

Sequence Coding Region

1887610..1887838,1889958..1890263,1890631..1890920

Expression

GEO Profiles:Os01g0134500

Genome Context

<gbrowseImage1> name=NC_008394:1887525..1891262 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1887525..1891262 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggcggcggcggcgagtacctgcgccagttcgtcgaggagacggcctggtacaacgagatcttcctcagccatgtggtcccgggcgactggtggcgcgccctcccccacccgctccagtcgtggctccgcaacggcctcggcggctacctcatctacttcgcctgcggcttcctctggtgcttcgtcatctactactggaagcgccacgcctacatccccaaagattctatacctacaatcgaagctatgaagaagcaaataattgttgcatcaaaggctatgcctctctattgtgcccttccaaccttatctgagtacatggttgagaatggatggacacagtgttatgttaatatcagtgaagttggttggccaatgtacctggtttatctggctttatatcttatctttgttgagtttggaatttactggatgcacagagagttgcatgacataaagccattgtacaagtacctgcacacataccaccatatttacaacaaggagaataccctatcaccatttgcaggactagcattccatccactggatgggattttgcaagccataccgcatgtgtttgcgctctaccttatcccaacacacttcaggacacacattgctctcttgttcatagaggccgtgtggacaactaacatccatgactgcattcacggcaaggtttggccggtcatgggtgctggctatcacaccattcaccatacaacataccgtcacaactatggccactacaccgtgtggatggactggatgttcggcacccttcgagagccagaagatatcttgaagaaggattag</cdnaseq>

Protein Sequence

<aaseq>MAGGGGEYLRQFVEETAWYNEIFLSHVVPGDWWRALPHPLQSWL RNGLGGYLIYFACGFLWCFVIYYWKRHAYIPKDSIPTIEAMKKQIIVASKAMPLYCAL PTLSEYMVENGWTQCYVNISEVGWPMYLVYLALYLIFVEFGIYWMHRELHDIKPLYKY LHTYHHIYNKENTLSPFAGLAFHPLDGILQAIPHVFALYLIPTHFRTHIALLFIEAVW TTNIHDCIHGKVWPVMGAGYHTIHHTTYRHNYGHYTVWMDWMFGTLREPEDILKKD</aaseq>

Gene Sequence

<dnaseqindica>86..314#2434..2739#3107..3396#actctctctctccacgctttacaactcaacccccgcaccaccaccagtccaccaccacaatcccagggcggcgccgcggccggcaatggcgggcggcggcggcgagtacctgcgccagttcgtcgaggagacggcctggtacaacgagatcttcctcagccatgtggtcccgggcgactggtggcgcgccctcccccacccgctccagtcgtggctccgcaacggcctcggcggctacctcatctacttcgcctgcggcttcctctggtgcttcgtcatctactactggaagcgccacgcctacatccccaaaggtccgcgcttctcctatcctcctcctctgctactgcttcttgattttgatttgtggatttttacagggagggtttttcccccctatgtttaacagggaggagttgttgttcctctctttttgagaatttattagtggaacatgcctgatgccattagagggaaaagggcattccaaaaaaattgatatttttgggtgtgtctgtgtgtgacgtgaggttggccacacggccgctttcattaatgaggtgtaagggatttggacttgaagattttcagtggtttcggcgcttcagagggataacgatggcgatagatttgtagctagtgctgagaacgaacgaaagattccagctttgcttccaactgtccgtcctcccttcggattttgtttggtgggttggggagaaattgctgtacatgacacatgatctacaatgttttactgcagctgtgggtatcattcacttcgtactatccgtgggctcgtctacgccttctattttggttgagaattgatttccctttggggattgcctctctctttggatcatagatagtgaagatagatatctggaaatatatgctaagtgggagactgtggtttatactccattcttgtgtagatgtttgcggcattctgcttgttaaaataaaatctgcataaccgtctagtgattcttttcgtaaggattttaggtttctgctatcacattgtttgaagcattgagagttacaaacttggtatgacggttcagtagaagcatatcaagaccttagcgatcccaccgaagagctttagtaaccaaacatgacctattatgggccaacaaaagagaagaaaaatagctagatgaactgacattctgaaaaataaaaacattagatgcgctaacagataaatggaagtgcgcatgactgcatgttactcatgtattagatctgttccaatgtcttgtaagggtaggtgcatagttaattgactagtttggctggcttctgaccccagtcacatgttactagttagacgttgttgtcaagttttttaagagccagggggagatcacatggttcactaaacaaaccatgataacaaagttaaaaccttaatttgttttttgggagcatatcatcccacaaacggacacattctcagagataagcctgaaatcataagtaatcagccagcatcccgcatcccagaaagagcttttttacaaaacacattgtttaaaatccagaaatcagacttggatggccttcttgttgtcatccttccatttaacttcttgttctgttcaagtggtcattattcattttgcttatgcataaatagttcacacatttcttgttctttctatgatgttaggcatgctttctacaacttcaggtactagatatttaggcagcttgttccaaaacgcacaccacacagacacctgtgtagtaaatatcaaggccatgcagcaagatgcgcatgattgtgttatcttttgagttcatcactttctggatttcttggcacaaagcctgaaatggtgtctagcctgtcttcttatgaactgtgaaccagtgattgttgactaacctctcctgtgggaccaagatacctttagtttgttccttgtggctcaggctcagcacagttggacaagtgggatggaaccttttgagctggttttttcccccttgttttgggatcaagttccattttgctgtatgacagctattacatgcaaatgatgttagcgcagtttgtcaccatcattcatgtattcgatatgatttggtgtgctgtagcctgagcaggcattgtttcagctctaggccatttgttgaaactaacctggcagtatagaaactatagctagatcattgtttttcatgcaaaccattttatacccattaatcatgtatcaaatattgcatatccatacatactagcagtggagactctgaccttcccaatagatgtctcttgtttcttaatatagcaatgttgcttataatggttattgaaatgagttagtccacgatgatgagcacattaaacaatgtgtatgtaatatgtgataaggtttgatggaagctgatgctgaaatcttatgacacttgatgcagattctatacctacaatcgaagctatgaagaagcaaataattgttgcatcaaaggctatgcctctctattgtgcccttccaaccttatctgagtacatggttgagaatggatggacacagtgttatgttaatatcagtgaagttggttggccaatgtacctggtttatctggctttatatcttatctttgttgagtttggaatttactggatgcacagagagttgcatgacataaagccattgtacaagtacctgcacacataccaccatatttacaacaaggagaataccctatcaccatttgcaggtaagttttttatggagccgtttaatattgcaaattcactttttatgtttcgctgtgcatagatatataatgagaacagattccatattccgaatgcttatttttaccatgcttccagctttttagtataattctgtgtattagttatatatattttcctgctaattaaatgtgcttaaacactaggataccttatttaaggctcctaaacctgttacccgtaggccataccataataaaaaaaaaatgccatggcgctccaatgtacatttttaaacaatacaattttctttagttaactcctttggtgctgagaattgtgtattcttccaccaagcttctgatttatgccttgcatgctttccaggactagcattccatccactggatgggattttgcaagccataccgcatgtgtttgcgctctaccttatcccaacacacttcaggacacacattgctctcttgttcatagaggccgtgtggacaactaacatccatgactgcattcacggcaaggtttggccggtcatgggtgctggctatcacaccattcaccatacaacataccgtcacaactatggccactacaccgtgtggatggactggatgttcggcacccttcgagagccagaagatatcttgaagaaggattaggatcgaattgttaagcacggcgcgacgttcgcctctcgtctttgtagcagtcggaagaagggggttctatgtatttatcctgctcgatgctatctgttatctttcatgtaccaatgtgctgtttcagtatgctaggtgaacataaaagtgaactttagtgagttcatcatccctggaatgcaatggaatcgagagatatatcctgggtaggttccaggtgtttgtaccattcctgaatttctctgtacttctttgtgtcaaagaacatgatgaacagttgtggccagcttttgtacagcaataactgttttattgtaactgctgccatccttttgtatcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0134500, RefSeq:Os01g0134500