Os01g0139600

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0139600| Description = Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diph...")
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Gene Name

Os01g0139600

Description

Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase)

Version

NM_001048512.1 GI:115434437 GeneID:4325474

Length

3501 bp

Definition

Oryza sativa Japonica Group Os01g0139600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2096192..2099692

Sequence Coding Region

2096677..2096694,2097576..2097797,2097889..2097976,2098080..2098189,2098299..2098392
,2098786..2098974,2099061..2099120,2099231..2099391

Expression

GEO Profiles:Os01g0139600

Genome Context

<gbrowseImage1> name=NC_008394:2096192..2099692 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2096192..2099692 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtggagagaatacggatgggaggagggaggttcagctgggccctcacacgattcagacacatggagttagattggccagaaatcacctgcatgattgggtcgttcttattttacttgctgcagttgtgattgccctgcatttcgctcctccatttagccggtttgttgggaaggatatgatgacttatgttagttacccggtgaaacaaagcactgtaccagcatggggtgttcctataatatccatagtttgccctgtaattatctttctatccgtttatatcgctaggagagatgtctatgatcttcatcacgcaacattaggtgtgctttactcggtgctgataactgcagttgtaactactgtggtaaagaatgcagtaggaagacctaggccagacttcttttggcggtgttttcctgatggaaagcagttatatgatcaagtgacaggtgatgtgatttgtcatggagagaaaagcttcttaaaggatggacgcaagagttttcctagtggacacacgtcgtggtcttttgctggacttggatttctgtcactctacctatctggcaaaattaaggtgtttgatcgccaaggtcatgttgccaaactttgcattatgattcttccccttcttattgcttcactcgtcgggatttctagaatagatgactatcgacaccactgggaggatgtgtttgctggcggcctactaggatttatcatggcgatgctctgttacttgcacttctttccacctccataccatcatcaaggttggggaccgtatgcatacttccatatgcttgaggagcttcaagtggccaactcccacaatgcagaaagccagcagtcagtgtgtgggcatcatgttgagctatctagactacacaatagcaggacatcaagaaatgatctggaagctggtcgtgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MRGENTDGRREVQLGPHTIQTHGVRLARNHLHDWVVLILLAAVV IALHFAPPFSRFVGKDMMTYVSYPVKQSTVPAWGVPIISIVCPVIIFLSVYIARRDVY DLHHATLGVLYSVLITAVVTTVVKNAVGRPRPDFFWRCFPDGKQLYDQVTGDVICHGE KSFLKDGRKSFPSGHTSWSFAGLGFLSLYLSGKIKVFDRQGHVAKLCIMILPLLIASL VGISRIDDYRHHWEDVFAGGLLGFIMAMLCYLHFFPPPYHHQGWGPYAYFHMLEELQV ANSHNAESQQSVCGHHVELSRLHNSRTSRNDLEAGRV</aaseq>

Gene Sequence

<dnaseqindica>486..503#1385..1606#1698..1785#1889..1998#2108..2201#2595..2783#2870..2929#3040..3200#acgattcccgatgctcgcgaagtttcttttctccgtttctcgcctcgtccccttccacacgactctactaaaaaaactcgatcgtctctctcaaaaaaaaagactcgatcgaatgaaaagaggattttcttcttcttcttccccaatgagctcgttgagttctcgcttccatcgctactaggtacgcaccacaaccattgcattcttttttcggtttttacagtcctggttattcagctcgtatgctaggcagttagggtttaggagcggtttaaactttaaagctgtcaataaaagtttttttttctctatctaattgtgcttttggatttagggatttggaatacgctgcgaatgcaatactgatgtcttgaagaaaattctgaggaagttggttgcttggttcagtggaaacccggggaatttgtactgacttggggcacaggttcgcatccatctgcggtgattttgttctgcagtcctcaatgcgtggagagaatacggtgagaccaatgagctctttgcattctgttcaactcttgactgctctgatgtgctttgcaaaaggatgttcgatttgacagatgtatagtactctttacatctgaaattcctcgcaccattgagacgcatgaaattcctaaatcctaatgcgctttacattgattgatcggatacttagttggcgatgcttgtgatttcagtgttgctttttgcccctaatgtgtaatctgtatctgaccttcctcttgcatagggtgttaggcaattagtctaatgctgcttcctgtaagagcaaggataatagtgggctataagcaagctatatgtttatgtagaagagagagataaacaaaagtggggagtgttggctctcatgcaagagctaactgcacacaaactccaagaaatatgcattaaattcatggtgagagaaagagagaggatgaaaaaaataaagataaccttatagccaacctactatacatgttagctttaacattgactaattgtaattagtgagctgtactattaaacttgctctaatctgtggcctgcaattttccccttcgtcgtaagtcttgagtaacgtgttggaatatttatgatgcgattattacatgaaaccaagtttcgttaggatttgcctcagaatcaaaattggggccaatactcaataggactcatgttcagatatgatgttcacatttagatgtgaagcaatataatctaattaacatcctagttgaacttatctcatgttgcagtaatgcaagttatgtttacctcctgaaactcaaatgctggtcatatctaggcttaattatggtacgcctgcttgtagaatactgatgttcttggtataagtattaattttcaacaggatgggaggagggaggttcagctgggccctcacacgattcagacacatggagttagattggccagaaatcacctgcatgattgggtcgttcttattttacttgctgcagttgtgattgccctgcatttcgctcctccatttagccggtttgttgggaaggatatgatgacttatgttagttacccggtgaaacaaagcactgtaccagcatggggtgttcctgtatgtatccgaacctctgcatttccatttccttatacaaactcaatacacacattcatcgctgatattggatacccggtcctcttggcagataatatccatagtttgccctgtaattatctttctatccgtttatatcgctaggagagatgtctatgatcttcatcacgcaacattaggtgattgtcgatgtctccattttcttctgatggttcactacttctgaatacaaagttctgaatttcatataccgagaaactcatcagaatgttaattctgcaggtgtgctttactcggtgctgataactgcagttgtaactactgtggtaaagaatgcagtaggaagacctaggccagacttcttttggcggtgttttcctgatggaaagcaggtagagttttcctcaaatgtttatgcacaaatagttctaccattttatgttgcttgttatttgtcaattttgaaactgacaaggcactgttctggtaattttatctcagttatatgatcaagtgacaggtgatgtgatttgtcatggagagaaaagcttcttaaaggatggacgcaagagttttcctagtggacacacgtcgtgtaagtttgtaactttagtgcgtatctacactggatgtgatttttgatggataagtttgcatttcctagtagctggtagtttgaggtatcaagcatcaatcactggttaaaggttgtcaacaagtgctgcgtatcctacccgtagctcagttattataatgttttgtaccattgtttcaaaaataatgttttgtacctggacggctggaccttgactcgatagtctggatcctcgtgttgtatgtcttattgtctgtctggcatgatcatagttatgtcaggtgaataccatgtgaataccacttccattgttacatgaaaaactgtgaagtaatttgtacactgattttctaaatccatgactagattattttacacaaataatgcttccagggtcttttgctggacttggatttctgtcactctacctatctggcaaaattaaggtgtttgatcgccaaggtcatgttgccaaactttgcattatgattcttccccttcttattgcttcactcgtcgggatttctagaatagatgactatcgacaccactgggaggatgtgtttgctggcggcctactaggtctgttcttctccccctgtccttctccacatacgtattgcacactttcatactcataatgatcacattgaattgatatgtttcaggatttatcatggcgatgctctgttacttgcacttctttccacctccataccatcatcaaggtttttcagctttcttaagcaaattcgttcaccaaggaatggtttctctcttccttaagcaaatttgaatattcctttttgaaagtggctctcttccttttcatcttaaggttggggaccgtatgcatacttccatatgcttgaggagcttcaagtggccaactcccacaatgcagaaagccagcagtcagtgtgtgggcatcatgttgagctatctagactacacaatagcaggacatcaagaaatgatctggaagctggtcgtgtgtaacatccctagcatgttgaaaaccgaggaagcggcatgtacagtaagcatgactaaaccttctatgcttgtaatcaacaaatattagcaactagagctcaagcctcatactgaattatccaactatcatgtgtgaaatcataaagttagcatatgctagcgtagtcgtccccaggtctacgtctacctgttgcgtccaaatcgtttccatgtcttagtgtgttttagttgctagtggaagtactgattgggaacttattcctgagttaaaaaacgaaacataatggaggtccgaaaatgacag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0139600, RefSeq:Os01g0139600