Os01g0141100

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0141100| Description = Similar to Salt-induced AAA-Type ATPase| Version = NM_001048518.1 GI:115434449 GeneID:4325480| Length = 7151 bp| De...")
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Gene Name

Os01g0141100

Description

Similar to Salt-induced AAA-Type ATPase

Version

NM_001048518.1 GI:115434449 GeneID:4325480

Length

7151 bp

Definition

Oryza sativa Japonica Group Os01g0141100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2214662..2221812

Sequence Coding Region

2214923..2215048,2215131..2215286,2215371..2215469,2215557..2215631,2215732..2215800
,2216515..2216713,2220162..2220237,2221121..2221271

Expression

GEO Profiles:Os01g0141100

Genome Context

<gbrowseImage1> name=NC_008394:2214662..2221812 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2214662..2221812 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttccgagcagtccaagctgagggctggactcaactccgccatcatcaccgagaagcccaacatcaagtggaacgatgtcgccggcctcgagagcgccaagcaagcgctgcaggaggccgtcatattgcctgtcaagttcccgcagttcttttgtatggtccaccaggaacaggaaagtcttatttggctaaagctgttgcaactgaggctgattctacatttttcagtatatcttcatcagaccttgtttcaaaatggatgggagagagtgaaaaacttgttgcaaaccttttccaaatggctcgagaaaacgctccttccattatcttcattgatgaaattgattcattgtgtggtcaacgaggagaaggaaatgagagtgaagcttctaggagaatcaaaactgaacttcttgtgcaaatgcagggtgttggccataatgatgacaaagtactggttcttgctgctacaaacacgccatatgctctagaccaggctgtgcgccggcgctttgataaacgtatttacattccactacccgacctgaaagcaaggcaacatatgtttaaggtccatctcggggatacaccacacaacttaaatgaaagtgattttgagaacttggctcgtcgaacagacgggttttctggttcggatattgctgtttgtgtaaaggatgtgttatttgaacctgtccgcaaaacacaggatgccatgttcttctttaaggctgatggtgatatgtggatgccttgtggaccaaagcaatctggtgccgtacaaacaaccatgcaggagctcgcatccaagggccttgcagcaaagatccttccaccaccaatctcaaggacagatttcgagaaagtcctcgccaggcagagaccgacagtgagcaagaaagacttggaggtgcacgaaaggtttacaaaagaatttggcgaggagggttga</cdnaseq>

Protein Sequence

<aaseq>FRAVQAEGWTQLRHHHREAQHQVERCRRPRERQASAAGGRHIAC QVPAVLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVANLFQMAR ENAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDDKVLVLAATNTP YALDQAVRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFENLARRTDGFSGS DIAVCVKDVLFEPVRKTQDAMFFFKADGDMWMPCGPKQSGAVQTTMQELASKGLAAKI LPPPISRTDFEKVLARQRPTVSKKDLEVHERFTKEFGEEG</aaseq>

Gene Sequence

<dnaseqindica>6765..6890#6527..6682#6344..6442#6182..6256#6013..6081#5100..5298#1576..1651#542..692#ctttttttcccctctacatcttccttcccctttcctcctcctcctcgtcttctcctcctccccaccgcgtcaaaccccaccccgaagcaaccgccgccgccgccgaatccgccaccggcgaccccaatccgcgccgccggggcccgatccccactccgatccgccgtaatccggccggcccccccgcgcgcgcgcggccggcggcggcgccgccttcgcccccgatgtacagcaacttcaaggagcaggcgatcgagtacgtgaagcaggcggtgcaggaggacaatgccggcaactacgtcaaggcgttcccgctctacatgaacgcgctcgagtacttcaagacccacctcaagtacgagaagaaccctaagatcaaggaggccatcaccgccaagttcaccgagtacctccgccgcgccgaggagatccgcgcggtcctcgatgaggggggtgggggtggtggcgccaacggcggcgacgcggccgtcgccacgcggcccaagaccaagggtaaggatggggaggggggtggggatgattccgagcagtccaagctgagggctggactcaactccgccatcatcaccgagaagcccaacatcaagtggaacgatgtcgccggcctcgagagcgccaagcaagcgctgcaggaggccgtcatattgcctgtcaagttcccgcagttctttacgggtgagcggctgctgcgaggataaccagtatattttcattctccttgttgtagagaatagaggtgattgcaaaattggtggtggatccgatcgtataggccgtacatggatattgatctcgatcaaaacggatagggcgagtattgttgattgccaacactaatcattccatgttgatggttgctcggtgtgcagggttagctcgcgtaattactgtattttgtttgtagatgactgtttgggtgtcgactatagttcagagtccacttctagagggtgctgggtgcaactattatgttgtgtagtcttggtggaaatcttgaaagttacatcctagaggattgctaaaattgatattaacatgatcttggtactagacaaacaatgtggagtaaaaccataatttacagctagtagtttgaattgaaaggcagttatggaaacaagggaaaaaatgctgctttagtgataggtgcattggttgttacagtgtaatctataatcatgcagcaagttactagcttgacatacattcaattgtttaatcttgcaaatagttattttcaaatattgagggtctgttttcctcgtgcttctagtgaccttcttaatgacttacaagatacagtaagtgaattttctaacagctactaagataaaagtaccattattctcaactctcaaccattgttcaagtgttcatgactaacatcttgcgcatcttctttgttacatgataaatttctccatggtaaacaacgactataaaaaaatgtgtacatgaactcatcttaagtctgggatctggtgttgttagctattttatactaatggagatttctttcttaaggtaaacggagaccatggagggcttttcttttgtatggtccaccaggaacaggaaagtcttatttggctaaagctgttgcaactgaggctgattctacatttttcaggtagttataccctcatatatatacctatatatttcaactacatatcttgacaataaatcctcactcttactaattccattactaaaactcaatgacgtggtgccttttacgttggtgtcatggtagatgttcagttgagttgtgtgttaaactaacattctcccaacatccctaactctttcgctgctacctcactacatgtgtatgttctgaaactgtaatttgtagcatgctttgctctcttttttcagtggtattgaacagcaatcaaaatacttatgtttttgtgattccattttgcacttctgtgtgtactcaagggtttaatgtattcctatgagctattcaaaattcatccagcattttcctttggaaagattatattgagcttttgatacttcctgttgatactgtagtagttttgcagttcatgtcttggggtaccattaaggctttaaaaaactgccaagattccttctctaagtggcaatagctagttagtcttattttttcatgctgcaatttctcttgttgattttttctctatattttttaaagttcaaattatgcagctgttattgtcaatatttatgaagctgcatgtattctgtgtataaatgtatggataatgttcagaattaaatagcttggaacaccagtagtgccttgactcctttctctggataaggtgatgtcctgattcagttgttgccccattgctgcagtgacactcttggtgagcctataagaatgtttctaggcagccaaaatcctaaaaaaaaatgtataattgatgcaggcaagtgagcttttttctcaaaaaagaaaacatttatggaaaactgtgaaagctgtttcttgcaaggtgtgtcctattaatagcagctcttacataactacttttggtttggtcacttttcatgtgtgcaataagctatttttaagccatcaacatcccaaagcttaaagcagatacttattttacacatgttgtataccgagttcgattcatctttctttgtctttgtatagatttgtttatttttagtacatatctaacacctgtgttgtaatgataccatgcgtaacctaaaacggctgttgttttacttcatttgtttttctttgatgtttttgaactaaccaacgtcaaataaaagaaatggagggaatacttattttactgggagcacttgtggtttccttgacatataatagctaatgcatatgtttatagaagaattggtatgttttgatggcatgatgccctggcacattttttctgttttcaaatatgtttaaacattctctagcaattattactcctgatctgaataacttttgtgcattcatttttcgctgctagcatcagttgtcctacacaggatgcttatcccttgatggaactatagagatatagagccaaaatttttatttataataatctataatcctaaaattaaataatcagtaaattagtggtattatttagcaaaatagtaaggacactactggtcacagcatccaggtgtggacgctgtaacaaactgcgtccatcagctggcgcagcccaatgctccccggccaagtccacaagcgtataggtttactcgacctgacacaagcaccggccgcctgctgtcctcctttgtcctcctcaatcgctgcagcgcggtggccccgggcactgtttacaaatttcatacaaatgtttacatgttcatgcagtagacaaagcaatcattgaacacatatttcctgtacctagaataagaatctcaacatttatccatggcagcagcaaaaggagaagatttaactaggtctagttgctatagttgatactagaatttccatgatatttttgagtttagaaggagagatttctactataaatggtcttaataattgtataatgcctgctaaaatagataaattcccctttatcaacctgttctttaaaacgcaaaacatacggagaggctagacttaccttgtaaactgccttcagaaggccacaatgatctttatttagaacaatagcacatactgttgctcaattcttacactgtaccaaaaacagttgagtgatcacttatcagtcatcactgaaatataggcaaataactaatattggttgcatattgaatactaaaggcagtatttgaaatgtccaatgccttctgaggttctgattatcactgtaatatcaaattcagtgtgcagaaccaggttcttatccattaaatggaattgtggcctgcataacaggacattgctcagatataagttcatgttttctacttggttccagtcagaactcataaaagtccctagcccccactgttttttgtttgccagaaaacaactggtttgtggagttcagcgtaaagctagaaatcagtcaatatctttctgaataaattcagaattggtcaaaagctggtttaatccgggacagattgatgtgcaaactaagggtgtgttggtagtggctgttgtgaacttttccctccagcacgtaaaacggagtgactcattagcgcattattaattaaaccttgtttaaaaaaaacttgaaaaatggattaatatgatttactaaagcaacttttctatagaattttttttttgtaaaaaacgcaccgttcagctgtttgggaagcatgcacgtgggaaacgagagagtgaagttgggaaatggcgggttcgaacacagcttaagcagagaatcttgctgcccagaacagtttaacaagaaaatgttgatgttgacatattttctaacccttggtgttgatatcaaaatggatttgagtttagagcattatatggtagtagtaataatgtagtattaccggaccaatgaacattttacacagccacttccaatgcatagctatatggtagtagtaataatgtagtattaccggaccaatgaacattttacacagccacttccaatgcatactaaaagaaagttcatgagacagtcctgtaacagttgacggtctatcatgtatgcattgataattcaatttcgctagcagttccaaagtaataaaaaagttaggtcttttctaatcctaccactagagttctgtagctaaccacacaagcagtttgtattcactgttgaccacacaattcctcaaagattcagttacttgcgatacctatctagcaacaccacatctgatcattgtgtgattaatactgggagtggctacagtccaacgattatttatgtggtttctcatgccacagcttaattcatgtttacaatgatgtgcagacatctgtgaaagagaaactgcagtattccttttcttctacctgattgctccatgatgttgccaatgatcaatatcaatgtataccatattcatttgtattgttcgtgcaatatattttattatgtttcatttaatgtgtttgctttatgcagtatatcttcatcagaccttgtttcaaaatggatgggagagagtgaaaaacttgttgcaaaccttttccaaatggctcgagaaaacgctccttccattatcttcattgatgaaattgattcattgtgtggtcaacgaggagaaggaaatgagagtgaagcttctaggagaatcaaaactgaacttcttgtgcaaatgcaggtgaattttagcttatattattaacttttcttaatcaggtgcctgctacctgaatactttaaatgtgtacttggacgtgttattcttagaatgataatgatcctgaaagttcagagcttcaattggagacgcacaaaatgctgttatatttgaaacttatatagttcgttaaggatcaagttattgaaacagtgcttctaacttgtatatttgaggggcaaaaaggaacatggtatattttcatttcacattttagttctaagatttgttgccacaccgttttagctaatactggcgtactggaccggctacttcctctaataccagtaggtttctagtaccaagtccaaacagagttgtactagtatcaggtgtcttagttagggatattagccaggccagatctgaagctattccatccagatttggaatcataaaagtgaaaacgtgctaaatttccaagtagatcagatgcgaattggctgattagttgctttctagatacatggatattgatgcatggcttgaccgcttgaccataataatcgaataccacatttgatgggcttcaaatactgtccatcttttcttagagcatgtatcatgttattccttgttatctgaagcattccatggtttgttaaactatttagatgccctttttgttacaccaacttacttaccttttgctttgtttcgctggtgaatgtccagggtgttggccataatgatgacaaagtactggttcttgctgctacaaacacgccatatgctctagaccaggtttaagaagatctataaaactgtgttgcaccattcagaactgtcaaaattctcttgttccattgaacaatttagtacttacttaaatccattatctcaggctgtgcgccggcgctttgataaacgtatttacattccactacccgacctgaaagcaaggcaacatatgtttaaggtgcagaattgtccaattcagtttcaagaaaatgtcatgttctgttgttacaatctttggctgagggcaaacctttaatttatccaggtccatctcggggatacaccacacaacttaaatgaaagtgattttgagaacttggctcgtcgaacagacgggttttctggttcggatattgctgtttgtgtaagttgttttctgcaacattctcatgtatccatgctctgttagcatatactgaaatctcgttgctcttttttctttcaacaggtaaaggatgtgttatttgaacctgtccgcaaaacacaggatgccatgttcttctttaaggctgatggtgatatgtggatgccttgtggaccaaagcaatctggtgccgtacaaacaaccatgcaggagctcgcatccaagggccttgcagcaaaggtaagattgattgacatttcctccactgcgcatgttagaagaggcttctgatgattagcaagatttatttcctgttatgtagatccttccaccaccaatctcaaggacagatttcgagaaagtcctcgccaggcagagaccgacagtgagcaagaaagacttggaggtgcacgaaaggtttacaaaagaatttggcgaggagggttgacaagattatgcgcactcacttatgcatagctgctccacagaaatgtatattttatgacttcgattgttctggttggaagttggattcacagatttgtacaattgatagcctaactatgattaattacaacctgtttattgcgttaggctatcattgctcctctgtcgtcaacttatttcatttttactgtcacttatacttgaaattttccacaagtgtattaattaaggaataatacttaacgtggagcccttgtggtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0141100, RefSeq:Os01g0141100