Os01g0142200

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Revision as of 04:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0142200| Description = Conserved hypothetical protein| Version = NM_001048525.1 GI:115434463 GeneID:4325487| Length = 2562 bp| Definition ...")
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Gene Name

Os01g0142200

Description

Conserved hypothetical protein

Version

NM_001048525.1 GI:115434463 GeneID:4325487

Length

2562 bp

Definition

Oryza sativa Japonica Group Os01g0142200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2270163..2272724

Sequence Coding Region

2270244..2270314,2270437..2270503,2270613..2270735,2270844..2270927,2271733..2271819
,2271913..2271999

Expression

GEO Profiles:Os01g0142200

Genome Context

<gbrowseImage1> name=NC_008394:2270163..2272724 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2270163..2272724 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagagcttcccggttgccggaggccgcagcgtctccctcggcctcttctccgacgtctccaacagctgggagctcctcgagctgatgcagtcagggaagctggagccggaggtcgcattcctcaacgcatcactggtgccggatgtgttcccggttctcgcggcggcgcacaaggcggtggtgtcgcaggggagggagtctctgaccacaagaactctgcattcggagctcgtctataactactccgggtctaagcatataacggagtctttgaaacgatgcggaatctccgacgacacgagttatatccttgcagctcgttttgatgcttcgaatgaggagataaaagctgtggagaagctcatctgtggcactgagattgatctagcggaactggaaacaagagcaaaccagccacagatcctgaagcattataaaataactccccaggaactatcaatatctacactgcccgatgcaattgtatgcaggattgctgctcgagatgccctttga</cdnaseq>

Protein Sequence

<aaseq>MKSFPVAGGRSVSLGLFSDVSNSWELLELMQSGKLEPEVAFLNA SLVPDVFPVLAAAHKAVVSQGRESLTTRTLHSELVYNYSGSKHITESLKRCGISDDTS YILAARFDASNEEIKAVEKLICGTEIDLAELETRANQPQILKHYKITPQELSISTLPD AIVCRIAARDAL</aaseq>

Gene Sequence

<dnaseqindica>82..152#275..341#451..573#682..765#1571..1657#1751..1837#aatagctaaatatatatcttcctcgactccgacaagaatagggttccaccgccgccgccgccgctcgccggagagagagagatgaagagcttcccggttgccggaggccgcagcgtctccctcggcctcttctccgacgtctccaacagctggtacgccactcgctgccaatctccttttcctcaccaatcgattcttccaccgagttcttggtcccagctacgaactgtgggggtgatgagaggaaatatcttggccttctcgtacttgtcagggagctcctcgagctgatgcagtcagggaagctggagccggaggtcgcattcctcaacgcatcactggtacatacaatcgtcgccattgtccctttctgtattctacatcagcagtaggactcgatcgatcactcgatgatttctttgtattttatttacatgtcgactatggcaggtgccggatgtgttcccggttctcgcggcggcgcacaaggcggtggtgtcgcaggggagggagtctctgaccacaagaactctgcattcggagctcgtctataactactccgggtctaagcatgtgggtagtctggtcacctattatttgttcttgttctaaaatggtgagatgagattgtgctgatatgtgatttgttgatggtttttgtgctgtttttttgggtttcagataacggagtctttgaaacgatgcggaatctccgacgacacgagttatatccttgcagctcgttttgatgcttcgaatgaggaggtattgtattcgagatagggatcttaaggaactaagttctagtgcgttagttgctcgcggagtcgctgttgttcatatttagaagccaggacacccttttagccaataatgatatctccttttgagttggctagcgttagtggtttcagtgtcaatatatattttgaatcatcatatcttgcctggatgtcacatttcaattccattactgtgggtgcaacaagtcggttttaaggttgcatgcatcaccaattagattgacatataaaagacatagaattgctgaaactttcaagttatggtgttaacagtacactctctttatgggaccttgaatcaaaagattgtggtattgacttcttactttcttagtggataacttgaagcatttttttgtattatgtatttctttttttgcgaagaataaagtatgctatacatatctctgtatcctggtttacacctctcacttttgctgagaaaaccagcatttttaccagaccaaaatttacatgacaggctgctctgtttagatccctatgtgagtttttgtgattatgtgctgcataatatgataaagagaagaaattttgaaattcagacgtgttctctaacagagatttaaacatacatcaaaattacataccccagttatatgcattggagtttgtcacgaaattgctgtcccgaagaacttgagaggcgtactatcaatttctgtttcctatgcattttctacgagttattgtccttctgagtgaaggaattcaaacaaccgtgatgtgaaaattttgcaatatggcagataaaagctgtggagaagctcatctgtggcactgagattgatctagcggaactggaaacaagagcaaaccagccacagatcctgaaggtttttagttgaactttgtgctaattatatgctaatatgtttttcatatgatttgtcctgaatgtcacattgttttcaatttcctattggcagcattataaaataactccccaggaactatcaatatctacactgcccgatgcaattgtatgcaggattgctgctcgagatgccctttgaggtcttaacactcatcatcaataattttttccacctatctgcatttatttctctgatcagactctgagcataaaattcacctctccttcatagttatgcttgtagcatgttatttcgggctgtaacttatgaagtgtataataacaacatgtagttctggatgttgtagctactcaactttttgcatacacatcaaaacacagcaacagttgaatatctgtgagctcatggtattcagatttgcgtgcaagcaacctgcgagcatcttacattgttgactcactcaaaaacctatctttcagtgacatcacggatcaagattgaaatctgggaggcctggtggttttttgcacatgatgatgtggtaccggtatgtttgttactgtatgatgatggttgctagtactactggactactggtgccttgggttcacgtgctgctgggacagcgttgcagctgtcgtttctgtccaagagaaaaacatggacagagaagctggtaacctgcccgccattgcagctgttactgcaaattccagttcaatgtttcttttgcatgatccatcaatctatcatgcatgtaatttgaaattcaagaaccccactggttttgttttttgtttttttggccaaaacactctgctgtgttctgtttgtttttggagtctgtatgatggtatctgtcagtatcattatcttgctcatcagttcgtctatcaattggg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0142200, RefSeq:Os01g0142200