Os01g0148500

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Revision as of 04:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0148500| Description = Protein of unknown function DUF1677, Oryza sativa family protein| Version = NM_001048556.1 GI:115434525 GeneID:432521...")
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Gene Name

Os01g0148500

Description

Protein of unknown function DUF1677, Oryza sativa family protein

Version

NM_001048556.1 GI:115434525 GeneID:4325216

Length

3666 bp

Definition

Oryza sativa Japonica Group Os01g0148500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2640000..2643665

Sequence Coding Region

2642408..2643607

Expression

GEO Profiles:Os01g0148500

Genome Context

<gbrowseImage1> name=NC_008394:2640000..2643665 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2640000..2643665 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagatggcggagcggcagcacaagaagcggaagccggagaagatggccggcgcgcgcaccagcggccatgataaggaggaggagaagaaggtgaaggctccttctgtgtacctggtggtaggccatgaggtgagctgggcaacctactccgtgttcaaggtggatccctacgcggcggcgaagagaggcggcggcggcggcgacgaggaggatcccgctccggtgcctatccctcgccggctcgcccgcatcagcgccaagttctgcatgtctttcgcccccgtgcccgtgcgctcatggatcgtcggcgtcgggggcgattcagcggatgaggactacgccccggagaccatcgtcttcgacaccgagactcgcgccgtgatccgggggcccaacctcctgtcgaccaagctccacccggttgtgctcaccatcggccacaagatctacgccctggcacggtatccctccgtcacggggcaactcgacttcgttccatggttcgaggtgcttgatctctcccaagcgcgcgtggtcgatggccatctagagagctgcgagtggaagcccctgccacggcctcccttcttcccatgggacctcaccccattgcagtacctttctccgccaatggttactgtcgagtcctacgttgcactggcctcctgcattctggtgtcattatctcagcaggagggcacgcacatgtttgatgtcgacaaggagcaatggtcgaaactggatgacaacagcctgccattcgtcagaggcgccgttccacacggacccatcttccttggcttatcgagagccaagaaaatcatcaccgcatacaatatcacagtggtctgccaaccaaggtcaggcggcacagcgccgtccttatcaattgttgagttccctgtggtgtctgacatggaagaggagatcttaagcacaccaatatttctttctctcggtagccctggcttctgttctttgaaaagttggagcgaccacccaacgacggatgatccatgtactcgtgcacgtatcaaattgatggcataccatacagaggaacccatatcacaagagtacatcgagtcttctcatggcttattgataccgaaccagtggaaacaggtgtacgagatatgtgattcgtccagggaattgatttggcaatgcctgatcactgcaatgtccttatga</cdnaseq>

Protein Sequence

<aaseq>MDQMAERQHKKRKPEKMAGARTSGHDKEEEKKVKAPSVYLVVGH EVSWATYSVFKVDPYAAAKRGGGGGDEEDPAPVPIPRRLARISAKFCMSFAPVPVRSW IVGVGGDSADEDYAPETIVFDTETRAVIRGPNLLSTKLHPVVLTIGHKIYALARYPSV TGQLDFVPWFEVLDLSQARVVDGHLESCEWKPLPRPPFFPWDLTPLQYLSPPMVTVES YVALASCILVSLSQQEGTHMFDVDKEQWSKLDDNSLPFVRGAVPHGPIFLGLSRAKKI ITAYNITVVCQPRSGGTAPSLSIVEFPVVSDMEEEILSTPIFLSLGSPGFCSLKSWSD HPTTDDPCTRARIKLMAYHTEEPISQEYIESSHGLLIPNQWKQVYEICDSSRELIWQC LITAMSL</aaseq>

Gene Sequence

<dnaseqindica>59..1258#aaaccctaatttctcttctcaaaaaaaaaaaaaaaatccagcggcggcggcggcgcacatggatcagatggcggagcggcagcacaagaagcggaagccggagaagatggccggcgcgcgcaccagcggccatgataaggaggaggagaagaaggtgaaggctccttctgtgtacctggtggtaggccatgaggtgagctgggcaacctactccgtgttcaaggtggatccctacgcggcggcgaagagaggcggcggcggcggcgacgaggaggatcccgctccggtgcctatccctcgccggctcgcccgcatcagcgccaagttctgcatgtctttcgcccccgtgcccgtgcgctcatggatcgtcggcgtcgggggcgattcagcggatgaggactacgccccggagaccatcgtcttcgacaccgagactcgcgccgtgatccgggggcccaacctcctgtcgaccaagctccacccggttgtgctcaccatcggccacaagatctacgccctggcacggtatccctccgtcacggggcaactcgacttcgttccatggttcgaggtgcttgatctctcccaagcgcgcgtggtcgatggccatctagagagctgcgagtggaagcccctgccacggcctcccttcttcccatgggacctcaccccattgcagtacctttctccgccaatggttactgtcgagtcctacgttgcactggcctcctgcattctggtgtcattatctcagcaggagggcacgcacatgtttgatgtcgacaaggagcaatggtcgaaactggatgacaacagcctgccattcgtcagaggcgccgttccacacggacccatcttccttggcttatcgagagccaagaaaatcatcaccgcatacaatatcacagtggtctgccaaccaaggtcaggcggcacagcgccgtccttatcaattgttgagttccctgtggtgtctgacatggaagaggagatcttaagcacaccaatatttctttctctcggtagccctggcttctgttctttgaaaagttggagcgaccacccaacgacggatgatccatgtactcgtgcacgtatcaaattgatggcataccatacagaggaacccatatcacaagagtacatcgagtcttctcatggcttattgataccgaaccagtggaaacaggtgtacgagatatgtgattcgtccagggaattgatttggcaatgcctgatcactgcaatgtccttatgagtaagcccctttgtcacatctagtccctggagtcaatggattgtggatttcatttgatttcttgcactgcctgtttatttacaactgcaaccataaagcatctataagatgacattactgctaatcatggattaacaccttagcacggtactgctacaatgtatgtcaggattgttggttcggggtgtgtatgtttgacattgctatgcctgttattgatttgcgatagtgaccacatagaccttgtcttcataatactgaagataaatatcaatactggctttagtttatataagacgacataaattgcccagagctgtctttttttttttttgatttttagtttttttaggaagcttctcatatgttagttctgtaaaggtactcgatttaagatttgtatctacaaaaagcaacaatctacaacagcaacagtatatttgtttgctgttaattagtttgagaaatatattaacattgctcaatcctgagctcaaaaggtaaaagcctactaatcctccctaatcttgccgctctttatacatgttaaccattggcgtctttattcttatatctcgtgttgtttcatggctttgagcttgggcccattaatgtgaatggtgaggcagcagagttatcattgaccatccttcatttctaggtcataaccttttctagactacataagcgacaatttttgttgtaaacttgtgatggcttttcatggttttgatttacacatcagctgtttactactagagtgattttagttgcactcttaaaatatttcagatggaaaaagaaaacagatattatagaagaagctgggggtgatctatcactctgcaagattgtatgttgctagctgtatgtagatatatgttgttttcaattttctttgcacgatgatggtggttatagattgatctctttactcgtgtacatgattgttagatcagaggacgaatatctctttttccatttttaacttaatcttgtagcttacttagtaagcacccatctcctggagccggtgcaacactataaaattcaaccacataccacaaacaattgctatatgtctacaaatatttttcctggattgggagaacactgcaaataatataactagaattcggcaaaaggatcattggtgctgaagctcctattttgttctatggttgctacaaccatgcattgattttttatctctttctttggagattataaggcatgtgtagaaagctttggttgcatgcttttattaccagctttgtgtggctactgggctagtggctatattcataaataggaaagcacattagctccaggatgtgatgactgatgagagcacatatggtgattggggaatgcagtaaggtcgtaaattctggcaataaacttgttatgacttaccttgcttcctatggtggatattagctccagcagtaatatgcctttaagttgaaaatagcattcgttttagtttgatgttgtcacatgcatacctgcttttttgtactgtatcataaaactgaaaaaaagtattccagtaagcccataattcaatcagtcaataatatatttacctcatgaaatgtactgtttgtattgaagctgcttgtattagctgtagtatgttatacatgttgcctatttatgcagttaatcgtttggaacccactcattaagtatgccgtcttttttggaagtactttgttcaatgtgcagggaaaatgttgtgagagctttgttgattgaacaactgtcattattatgctatttcgtctatagaaacatgttttttgggcatttcactattagttcatcggttaaaaaaactcatacaacattattgggcaagcatatgcttcctataatctttatcagattgccaatatcattgtttgttctgttgtggccttccctgaatctggtatgttgggtaattacaggtgtataatcttacgaacactacaaagtaatgtgagtttgtttgtgttaatcacattccacatgtatactgccttaatctagctcattttttgggtttaaccgtttattggtagcagttttaatatttactctattttacatataattctcaatattttatggttccacaggtatattccatgatgttggagccaccagaagtttattgtagaggctggcttaagaaaacggtttacttgtagcaccctacaattccagtaaattcttcagagtacaacagctttgcatggcttcgaacttagggagtagtgctgcagggcatcttttgcttgtgtattaagtggatttagaatatgatatttgaggagaaatgatcccctgtagtatctatgctggactgatctaattgaacctgtctaaaagagtttcatgtatgaaacagctgtacgtat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0148500, RefSeq:Os01g0148500