Os01g0149200

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Revision as of 04:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0149200| Description = Similar to Metallothionein-like protein type 2| Version = NM_001048558.1 GI:115434529 GeneID:4325218| Length = 3883 ...")
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Gene Name

Os01g0149200

Description

Similar to Metallothionein-like protein type 2

Version

NM_001048558.1 GI:115434529 GeneID:4325218

Length

3883 bp

Definition

Oryza sativa Japonica Group Os01g0149200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2664085..2667967

Sequence Coding Region

2664412..2664535,2665388..2665458

Expression

GEO Profiles:Os01g0149200

Genome Context

<gbrowseImage1> name=NC_008394:2664085..2667967 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2664085..2667967 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacccggggatggctgaggaggtgaccaccacccagactgtcatcatgggtgttgcaccttccaagggtcatgccgaagggttggaggccggcgccgccgccggagcaggagcagagaacgggtgcaagtgcggcgacaactgcacctgcaacccctgcaactgcggcaagttgaagcaagcaacctcctga</cdnaseq>

Protein Sequence

<aaseq>MYPGMAEEVTTTQTVIMGVAPSKGHAEGLEAGAAAGAGAENGCK CGDNCTCNPCNCGKLKQATS</aaseq>

Gene Sequence

<dnaseqindica>3433..3556#2510..2580#ccttcctgtgtgtggttcaggtgcccaaggtgatattcagattttctgagtgctcgtgtgttgtgcgatcagtgcccactgcccagttcgatcgatccgtgttgatctttgaaagaaagatgtcgtgctgcggaggaaactgcggctgcggatccggctgccagtgcggcagcggctgcggagggtaagatccgatcaccatcttctgaatttctgttcttgatctgccatgtatatcaactgtctagtcttggtgttggttagatgaaaattcgttggatctcggaagggatattgttcgtttgctagggttttttgtgtgctgtgatctgtagaggatttctgtttgtccatgttgttgatcttggtatgtattcatgacatgcatgttgtatgtgtcatatgtgtgcctctccttggatttgttttggataatagaacatgttatggactcaatagtctgtgaacaaatctttttttagatggtggccaaatctgatgatgatctttcttgagaggaaaaagttcatgatagaaaaatctttttttagatgatggccatgcatgacatggtctttgttgagagaaaaaaaagattcatgataggagattttgatttagctcccttccaccgttataaaacgaggagcatgcatgcagatgactgatgaggatctgatttcattttttatcccatcttcttataacagacaagaaataggctctgaatttctgattgattattttttgtcgggacggccaaagtaggctggccaatttcattaagattgggggaaacaaagttttaattacaacaatttcattaagattgggggaaacaaagttttaattacaacgacatgaaggatgtcgcgccggtctcaagcaaactcaagcccggaaagaaaaggaaaaaatggggcaaatcgggattactcgctagcctgggaaaaaatccctgctaccctccaaattgcgatttcctcgttgatgtcattcgctagccggtcaaccaacttggcgatgtgttgaaagatccttgtatttcgctctttccagataagccaacaaattagcatgaacagactatcgaaatccgtcctgtatgtgttctgaaaacgccgtcttgtcgcgatccaccaatctgcaagcggcctgacatcttccgcagtgattgcaatgttaatgttgcaccaacgtctcagcttgcgccaaagccgccgtataatcacaggacacaagcaaatgatggcagtcttcgttctcgcgttggcatagggagcaaatggcgtcatgcggccagtttctcttcgccaggttgtccgccgtgagacagcggcccttcagtgcaatccacatgaagaagcgaacacgcgacgacaccctggagtgccacagcgtgtccccgtaggaacagtcctctgtcgctatgaaaaatagatcatacgccgaggccactgagaaattaccatcagcagtcaacttccatttgatcgtgtcagccatctgctgcagtgacacgtcgcgaacttcatcccaaagttggaagaattcacccagagcttcattggacagggcaccttgtaatcggcgaatccatctgttagcaatcagggcatcagctactgtcagcttggcacggctcacatgggaaaacaacaccggccacctccaggcgaagcaacctttccctgtccaattgtctgtccaaaactgtgtgtccaccccatcaccaatgatgtgctcagcgacggatcgaaagatctcttccacatcgcttccaggacggaaagctgctaaggtccagggtctatccttctgctccaaggatttcgcaagccatttcaaccggagagcttgaccgaacaaattaagatctttgacaccaagtccccctttctcgatgggtgatcaaacctttcgccacgagactaggcaatgcccgccgctgatctcttcctgtccttttccaaagaaacccgcggcacttccgctcgatgtccttaatcgcccatcgcggtagctgcaggactgtcatgtaatgcaccggcaacgccattaggaccgacttgatcaagcacagtcgcccatcaatagacagcattttcggcttccaaccggctaccttctttgccagcctatcaaggatcggctggatctcggccttcgtcggtttcctagtggagagagggagtccgagataagtgattgggaacttttccactcggcaggagagaatggattcaacttgcacatactgctgctcgtcacattggattggagtgattgcgcttttggagaaattggttttgagacctgtggcagccccgaacaactccaggatacccttgatgactcgagcttcttcagctgtagggcggaaaaacagaaccgcatcgtcggtataaactgaaattggtggcaaattctgtcgtacgttgaggggcgagagcagtcttgccatccttgcctgggaaactgattgattatttgtacatgcagatgcaagatgtacccggggatggctgaggaggtgaccaccacccagactgtcatcatgggtgttgcaccttccaaggggtatgtgcactaatcctttccttcttcatatcctgtacttgttgttcatgggcaaaatccatgtgttatattactgaatttgttgaatagtataaggagagggaaatattgtgattattgacaccgttgtattgagtctcagggatcactatatatagaagtacatggtgtagagataagaaagaattacggatatggaagaagtccacgtaaatcaatcttatcctactctaactaccatatatatactttaatagaacagaattgagtacctccatctttctagctaccaacctcttttgtcaattatcatatgtttcctgccttttttccccttctgaatcacagagaacaaaagtacaaaacattttgttgagaggctcactgccttccattttacgtgtacgtatgacaaaattgcagcgctagctacagccaatgaaaaacgactaaaaacttcatgcacgttatgacaaaaactctctcctttatctgaagaaaacgattatgccttttactctgaaaactgcgtagcaacaatccaagatcgtttcatgtttcgctgagttctactcccttcgtttctaaatgtttgacaccattaattttttaacacatgttagattatttgtcttatttaaaaaattttgtggaatatgtaaaactatatgaatacattaaagtatatttaataataaatcaaatgataggaaaataattaataatttcttaatttttttaataagacgaatggtcaaatatatttagaaaagttaacggcgtcaaatatttagaaacggagggagtaattaattactgatctatggttggttaattctctgatggatgcagtcatgccgaagggttggaggccggcgccgccgccggagcaggagcagagaacgggtgcaagtgcggcgacaactgcacctgcaacccctgcaactgcggcaagttgaagcaagcaacctcctgatcaggaaaccaaggagatggaaggacctagtactgctaatctagtagtatgatccagttacgagtgatgagttgttgtcactgtaactttgtgtttcctctgtgagtttgtgatctaagacctgagactgaagaaatgcatcctagttaataagtgctaagaataaagatgttttgagacatctatggcgtctgtacgatgatagtccttcctctccagtcttgtggtgtgtacgtaattaagaatgcaatgctgtgtgtcatgtatgctttctatctagtgaaactgaactagtgagttggtatactaattttgcttttttgcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0149200, RefSeq:Os01g0149200