Os01g0149900

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Revision as of 04:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0149900| Description = Conserved hypothetical protein| Version = NM_001048564.1 GI:115434541 GeneID:4324515| Length = 4364 bp| Definition ...")
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Gene Name

Os01g0149900

Description

Conserved hypothetical protein

Version

NM_001048564.1 GI:115434541 GeneID:4324515

Length

4364 bp

Definition

Oryza sativa Japonica Group Os01g0149900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2698128..2702491

Sequence Coding Region

2698347..2699020,2699321..2700641,2701183..2701259,2701908..2702064

Expression

GEO Profiles:Os01g0149900

Genome Context

<gbrowseImage1> name=NC_008394:2698128..2702491 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2698128..2702491 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccagctgttgcaccatcaggactccgcgttttatgggaaggaactccatgggcgccgatggagcattcttcagttctttggcttccgtcgccgcctgcgatccactaagatgatctctgacaagaaacagagtcagggaaaaggcagtggtggaagtagacgccgaggttcatatgttccactgaaagatgaagacactagtgtcatggacgatgacaaacacactgagacaacaaagaaaaacaagtcttcaaaaaagagttctggtaagggaagtttgggctccttgattctaaaaaagctgtatggaaaggaaggccataaagaaaagatgcttcctgttgcaccgaagctactccgtaccctttcaatacattacctggaaagcaatgagtatgttcttgatggtgaatctgcttccaatggtgatggttcttcacaaagtattatgccaaattccacagatacaaatatccaaaatgctacattcaacacccaggatggttgcgataatgatacaagttcttcgcttctaaagagaggtgacattcatgtgaaacaaaggagccaccgtagcatttcaatggatggagttcttcataaggtcccttatggacataaggcatctgaagatgtaattaaagaaggactttcccggtcagcctccgccacatatgacagggatggtttgaaatcttatactgtaactgctgcaaaaagacctgtaaaccaaggttttcggcgttcacgttccctcactgaatcattggagaaatattctcacttgctggattctatttcaagcaaccagtcgaagaggacgctgacaagttcaaaatctactagggatcattctttggatgcgcctgctgtgatgactgggttgcagagtttggttatgactgctgaaaatctcgtgatcccagaacatgccttggcaccatatgttccagagagaattattgtggatggagatgtggatgctgctatggatgagatctctggtcataaggatgctgatggctctgaaaatactgtgttaatcgaagagtacatcgttgacaaaaagtgtggtgtttctgtgtcaactgaagctaatatatgtactccccctttactttcagaagtgattgatatttcacaggggcatgtagcaacttgtgatgacgatcaggttcactcatcaactgaagataatatgtgtactgttcattcaaaatcagaagaaattgatgtcccagaagaacatggaacaacttgtgacgatgaccatactaatttgtcaacagaagcaggtatgcatactactaaagtttcagaagacggaaggatttcagaagaacatacaacaacttcagatgacaaacaaattcattcatccgatgttctgaagtcaagagaaggtactttttgtgttcctcgtcccagtcaagaaattgaagctgagataaatctaagctgtgaacaagaaactgatagtccaatgtctgttcttgacatgaccttcccagatgatcctgctagtccagtgaaatatacaatcctggatgattcgtcgttgaagccaagagtcctccatttaagtgataccgatgattcagctgatatggatctcaataccagcacttccatggaactttcaactgctggcctgggtcacaaaaatgttcaagaaagtgactctgatgaactaagctctctccaagcagatccaaagaatgaagatgggttgatctatgtgaagaatatattcatgaaatcaagcttccgcaatgaagtactatttgatgaatggtgctcacagaacattacagttctccaagaagaggattgccaacactacgaggctgctgccgctgcatttgatttcactgagatgtcagctgatcagctacttctgtctgacttgacaaatgaagtgttgctcgacatctacaagaaatattctgtttccaagtccttgctctcccggttttcgtcttttgatagaccgaaacctgtgggaaaccatgccctcaaggaattgtggtctaaagtaagctgccatctggatgaacagccacagtccagcatagaaattgacacaattttgtcgaatgatctatccaagaacgatcactgggtgaattttcagagagatgctgatcacttggggaacatgttggcagactttgtgtttgacaggcttctgacagagttcactcttcagcttgcaaagttttga</cdnaseq>

Protein Sequence

<aaseq>MAQLLHHQDSAFYGKELHGRRWSILQFFGFRRRLRSTKMISDKK QSQGKGSGGSRRRGSYVPLKDEDTSVMDDDKHTETTKKNKSSKKSSGKGSLGSLILKK LYGKEGHKEKMLPVAPKLLRTLSIHYLESNEYVLDGESASNGDGSSQSIMPNSTDTNI QNATFNTQDGCDNDTSSSLLKRGDIHVKQRSHRSISMDGVLHKVPYGHKASEDVIKEG LSRSASATYDRDGLKSYTVTAAKRPVNQGFRRSRSLTESLEKYSHLLDSISSNQSKRT LTSSKSTRDHSLDAPAVMTGLQSLVMTAENLVIPEHALAPYVPERIIVDGDVDAAMDE ISGHKDADGSENTVLIEEYIVDKKCGVSVSTEANICTPPLLSEVIDISQGHVATCDDD QVHSSTEDNMCTVHSKSEEIDVPEEHGTTCDDDHTNLSTEAGMHTTKVSEDGRISEEH TTTSDDKQIHSSDVLKSREGTFCVPRPSQEIEAEINLSCEQETDSPMSVLDMTFPDDP ASPVKYTILDDSSLKPRVLHLSDTDDSADMDLNTSTSMELSTAGLGHKNVQESDSDEL SSLQADPKNEDGLIYVKNIFMKSSFRNEVLFDEWCSQNITVLQEEDCQHYEAAAAAFD FTEMSADQLLLSDLTNEVLLDIYKKYSVSKSLLSRFSSFDRPKPVGNHALKELWSKVS CHLDEQPQSSIEIDTILSNDLSKNDHWVNFQRDADHLGNMLADFVFDRLLTEFTLQLA KF</aaseq>

Gene Sequence

<dnaseqindica>3472..4145#1851..3171#1233..1309#428..584#gtttgtctgcatgttttcagaaagaggtgcttgtgtcagcatcatttctgtttctttgtctgaaaggcagcaaagggccttctcaacttgttttctattagctttgttcattgattatggtttatgtgtttcctcatgattaacatctgcctttggctagccgattttatggatacttggttggagaacatcttttttctgtattaaatttgtttggctgcacttttccagagttccagtttgctattcaggcaataatttatttgtacttgaaatgatattatgcgtgttattcgctaagttgttaatcggtggtcagtctgttcatgacaggtttaaagaaaagttgaggaattgttccttattctgcaaaggtggtgcttataaggaaccactcctcctacctttgttgacgggctaacaccaaatggcccagctgttgcaccatcaggactccgcgttttatgggaaggaactccatgggcgccgatggagcattcttcagttctttggcttccgtcgccgcctgcgatccactaagatgatctctgacaagaaacagagtcagggaaaaggcagtggtggtaagtttactgcttcatttttttgttacctgctagttgctataggaccttgaatactatggtgcaacagagtgtagttgaataatacaactgtgcaaattcatgtggttggaaaggttttttgcttgaaaaaaaaacacacacaagacaccaaggagaaacgctggacactaaagaggaacttggtgtcaattaattaagaagaaatgcgagcgtgcactagagtcgaacacgggacttcggggttgaatccgcatacctctgccactgcgctagcaagcgcttctcttccatttgatatttaggcgaattatgtaacttatgagaaatattaccataaaaaacccattggatatgagaggaggggctctcatataagaaattattaagaggagtgaggctcgaacccggaccggctagcccactaccttgtggtgctagccggaataccccaggggccttctcatgagcaatattactaaaacagtgtgaaatttactatttgactcttagtggtagtacagtagatacttaattccttgttatgtaaaacttaccaaaacagtgttctgctttgattatgatttttattataaattattctccttgcacgattataatttgcattagatgaaaaaataattgtaggaagtagacgccgaggttcatatgttccactgaaagatgaagacactagtgtcatggacgatgacaaacacactgaggtacatacaagttgcttcatcctgttcaagcaagcattcaaacacttcttttttttacattttggttataatttcttaaacttcttggttgtgtatatccctcgtggatatagaggccggattaatgaaaatccattatctaaaaaaaattccttaaacttcttcagactacagtgcatactatgagcatctagtttcagtagtttattacaatatttctagaacttttttggatcagaaattatttataagcataatatacgtataggaaatttccacgacattacataatccacataggaaatttccataagtattacttcctccgtttcaggttataagactttctagcatgtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggtagtacttgtctcctccaaaaccacatatagttacgtaaaaaaaacccccacatatagtcaatatttatttcatattggagttggcttatcacgttgttttcatttctcctattacagacaacaaagaaaaacaagtcttcaaaaaagagttctggtaagggaagtttgggctccttgattctaaaaaagctgtatggaaaggaaggccataaagaaaagatgcttcctgttgcaccgaagctactccgtaccctttcaatacattacctggaaagcaatgagtatgttcttgatggtgaatctgcttccaatggtgatggttcttcacaaagtattatgccaaattccacagatacaaatatccaaaatgctacattcaacacccaggatggttgcgataatgatacaagttcttcgcttctaaagagaggtgacattcatgtgaaacaaaggagccaccgtagcatttcaatggatggagttcttcataaggtcccttatggacataaggcatctgaagatgtaattaaagaaggactttcccggtcagcctccgccacatatgacagggatggtttgaaatcttatactgtaactgctgcaaaaagacctgtaaaccaaggttttcggcgttcacgttccctcactgaatcattggagaaatattctcacttgctggattctatttcaagcaaccagtcgaagaggacgctgacaagttcaaaatctactagggatcattctttggatgcgcctgctgtgatgactgggttgcagagtttggttatgactgctgaaaatctcgtgatcccagaacatgccttggcaccatatgttccagagagaattattgtggatggagatgtggatgctgctatggatgagatctctggtcataaggatgctgatggctctgaaaatactgtgttaatcgaagagtacatcgttgacaaaaagtgtggtgtttctgtgtcaactgaagctaatatatgtactccccctttactttcagaagtgattgatatttcacaggggcatgtagcaacttgtgatgacgatcaggttcactcatcaactgaagataatatgtgtactgttcattcaaaatcagaagaaattgatgtcccagaagaacatggaacaacttgtgacgatgaccatactaatttgtcaacagaagcaggtatgcatactactaaagtttcagaagacggaaggatttcagaagaacatacaacaacttcagatgacaaacaaattcattcatccgatgttctgaagtcaagagaaggtactttttgtgttcctcgtcccagtcaagaaattgaagctgagataaatctaagctgtgaacaagaaactgatagtccaatgtctgttcttgacatgaccttcccagatgatcctgctagtccagtgaaatatacaatcctggatggtgagatttccgtttagtagcagaaaacttacatacatacattagttttctataatttgaaaaaaaatacgatgtttagtttagagcctttgattttggagcttcagtgacctgtcactgtaagtgtctgaattaaatttacataaaggtagccagatcaagtatttttactttatgagttgcaggggacattaaaaagtccaatacagttcaatcattaaaaaaatcatttaattagcttttgtttcaagcttcagcttcaattttaaattgagtttttttttccttttccttttgcagattcgtcgttgaagccaagagtcctccatttaagtgataccgatgattcagctgatatggatctcaataccagcacttccatggaactttcaactgctggcctgggtcacaaaaatgttcaagaaagtgactctgatgaactaagctctctccaagcagatccaaagaatgaagatgggttgatctatgtgaagaatatattcatgaaatcaagcttccgcaatgaagtactatttgatgaatggtgctcacagaacattacagttctccaagaagaggattgccaacactacgaggctgctgccgctgcatttgatttcactgagatgtcagctgatcagctacttctgtctgacttgacaaatgaagtgttgctcgacatctacaagaaatattctgtttccaagtccttgctctcccggttttcgtcttttgatagaccgaaacctgtgggaaaccatgccctcaaggaattgtggtctaaagtaagctgccatctggatgaacagccacagtccagcatagaaattgacacaattttgtcgaatgatctatccaagaacgatcactgggtgaattttcagagagatgctgatcacttggggaacatgttggcagactttgtgtttgacaggcttctgacagagttcactcttcagcttgcaaagttttgagcctagctagtttttttattttgcccctaaaaattttgttggtttagctgttctatatggtggaatgctattatcctcatgtatatattaacattctttctgttctctccttgaagagaacaaggtttggaggggtggttgttacttgttagggcttaggaattcaattcatgtgctgaaaggttttgaaatttatatattgagtggggttgaaggagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0149900, RefSeq:Os01g0149900