Os01g0152000

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Revision as of 04:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0152000| Description = Protein kinase-like domain containing protein| Version = NM_001048578.1 GI:115434569 GeneID:4324494| Length = 4705 b...")
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Gene Name

Os01g0152000

Description

Protein kinase-like domain containing protein

Version

NM_001048578.1 GI:115434569 GeneID:4324494

Length

4705 bp

Definition

Oryza sativa Japonica Group Os01g0152000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2809313..2814017

Sequence Coding Region

2810340..2813112,2813213..2813637

Expression

GEO Profiles:Os01g0152000

Genome Context

<gbrowseImage1> name=NC_008394:2809313..2814017 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:2809313..2814017 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggctcttgctagcttcctgctgctgctgctgtccgtcttcatgtccatcttcttgcacttcatggcagtgcgaggagcagacggagaagacgccgcagcgttgctcgctttcaaggccgtggcggtgggcaacggtggtggcaacggcgtgcttgcgtcgtggaacggcagcgccgggccgtgcagctgggagggcgtggcgtgtggccggcacgggcgggtggtggcgcttagcctgcccggccatgatctctcggggaccctgtcgccggccgtcggcaacctgacgtcgttgcggaaacttgacctgagttacaactggctgcacggtggcatccccgcgagcctcggtcagctgcaccgcctcagggaactcgacctaagcttcaacaccttctccggcgaggtccccagcaatctgacatcctgcaccagcttggaatacctggccctcggcagcaacaagctcgccgggcacataccttcggagctcggcaacacgctgacacagctccaggtgctaggcctcgacaacaacagcttcgtcggccattggccagcttcactggccaatctgacgtccctgggatacctcagcctcaggatgaacagtctcgagggcacaatacctcctgaattcggcagcaacatgccgcgcctttacttcctcgacatctgctccaacaacctgagtggtgcactcccgtcttccctgtacaatctgtcgtcgctaatggggtttgatgcaggaaacaacaagctggatggaagcattgctactgatatcgatgaaaagtttcctcatttacagtctttcgcagtgttcaacaaccagttcagcggggaaattccctcctcgttctccaatctcactaacctcacgagtctgcagctatcaatgaacggatttagtgggtttgtgccacataatctagggaggttgaatgctctgcagaatctgcaactaggtgttaatatgcttgaagcaggggacataaaggggtgggaatttgttgagtcattgacaaactgcagtaagctagagattttagttctcagtaacaacaatttcactgggcagttccctatttcgatcgcaaacctctcgaagactctccaaaaactttacttgggtggcagtaggatttctggaagcatcccctctgatttcggtaatttggttggtctaagatcattatacctgtttagtactgacatatcaggtgtaattccagagagcattgggaagctggaaaacttgactacgctatacctgaataacaatagcttgtctggccatgtaccgtcttctgtaggaaaccttaccaatctgatgaagctattcatgcaaggcaacaacttggaaggaccaatcccagcgaatcttggtaagctgaaaagcctgaatgttcttgatttatcaagaaatcacttcaatggttcgattccaaaggaaatattggagctgccttccatttcacagtacttgaatttatcatacaactccctctctggaccccttccttctgaagttgggagtttgactagcctcaacgagttgattctgtcaggaaaccaattgtctggccagataccaagtagtataaaaaattgcatagtgctcactgtacttttattggacagtaactcgttccaaggaactatacctgtgtttctgggggacattaaggggctccgtgtacttaacctaaccatgaacaagttttctggtgtgattcctgatgcccttggtagcatccacaacctgcaagagttgtatctagcgtataacaacttgtctgggcctatcccagcagtgctgcagaatttgacatcgttatcaatgctggatctatccttcaatgatctgcaaggtgaagtgccaaaagaaggtatttttaagaacttatcttacttgtctttagctggaaacagtgagctttgtgggggaatatctcatcttaacttacctccatgctccatgcatgctgttagaaagagaagcaaagggtggttaaggtctcttaaaatagctctggcatcaatagctgtggtcttgttcttagctctagttatggtgattattatgttaattcgtcgtagaaagcctgtacataggaagaagggccagtccctaaccccagttgtggaggaacaatttgaaagagtttcttaccaggaattgtcaaatggaaccaagggattttcacagaacagtttgcttggaaaaggaagctatggtgtagtctataaatgcactttgtttgatgaggaaattgttgtcgctgtaaaggtgtttaaccttgaacggtctggatctactagaagttttctggcagaatgcgacgcactgagaagtgtgcgccaccgttgtctcctaaagatcatcacttgctgttcaagcataaataaccaaggtcaagatttcaaggcactagtttttgagtttatgcccaatggcagcttaaatggttggcttcatccaaaatctgatatgcccattgctgacaatactttgagcctaactcaaaggctggacattgctgttgatattgtggatgctctggaatatcttcatatccactgccagccgccgatcgttcattgtgatctcaagccaagcaacatccttcttgcagaagacatgagtgcccgagttggagatttcggcatatcaagaatcctaactgaaagcgcgagcaaaacacagcaaaattcaagcaacacaatcggaataagaggttccattggctatgttgctccagagtatggggaaggctctgcggtctcaactcttggcgatgtttatagtctgggcatattgctgcttgagatgtttacaggaatgagcccaacagacgatatgttcagagattccttggacctgcacagtttctcagaggctgctcatcctgacagaatcctggagatagccgatccgacgctctgggtgcatgtagacgccgaggatagcatcacaagaagcagaatgcaagagtgtttgatttcagtcattggcctcggcttgtcctgctcaaagcatcaacccaaagagcgaatgccaatacaagatgcagccctgaagatgcatgcgatcagagacgacgcttacctgatgttttctggctctctttcagtggacatggaagaggagacgaaacaaattagcagcgatttgaagcaacagtga</cdnaseq>

Protein Sequence

<aaseq>MAMALASFLLLLLSVFMSIFLHFMAVRGADGEDAAALLAFKAVA VGNGGGNGVLASWNGSAGPCSWEGVACGRHGRVVALSLPGHDLSGTLSPAVGNLTSLR KLDLSYNWLHGGIPASLGQLHRLRELDLSFNTFSGEVPSNLTSCTSLEYLALGSNKLA GHIPSELGNTLTQLQVLGLDNNSFVGHWPASLANLTSLGYLSLRMNSLEGTIPPEFGS NMPRLYFLDICSNNLSGALPSSLYNLSSLMGFDAGNNKLDGSIATDIDEKFPHLQSFA VFNNQFSGEIPSSFSNLTNLTSLQLSMNGFSGFVPHNLGRLNALQNLQLGVNMLEAGD IKGWEFVESLTNCSKLEILVLSNNNFTGQFPISIANLSKTLQKLYLGGSRISGSIPSD FGNLVGLRSLYLFSTDISGVIPESIGKLENLTTLYLNNNSLSGHVPSSVGNLTNLMKL FMQGNNLEGPIPANLGKLKSLNVLDLSRNHFNGSIPKEILELPSISQYLNLSYNSLSG PLPSEVGSLTSLNELILSGNQLSGQIPSSIKNCIVLTVLLLDSNSFQGTIPVFLGDIK GLRVLNLTMNKFSGVIPDALGSIHNLQELYLAYNNLSGPIPAVLQNLTSLSMLDLSFN DLQGEVPKEGIFKNLSYLSLAGNSELCGGISHLNLPPCSMHAVRKRSKGWLRSLKIAL ASIAVVLFLALVMVIIMLIRRRKPVHRKKGQSLTPVVEEQFERVSYQELSNGTKGFSQ NSLLGKGSYGVVYKCTLFDEEIVVAVKVFNLERSGSTRSFLAECDALRSVRHRCLLKI ITCCSSINNQGQDFKALVFEFMPNGSLNGWLHPKSDMPIADNTLSLTQRLDIAVDIVD ALEYLHIHCQPPIVHCDLKPSNILLAEDMSARVGDFGISRILTESASKTQQNSSNTIG IRGSIGYVAPEYGEGSAVSTLGDVYSLGILLLEMFTGMSPTDDMFRDSLDLHSFSEAA HPDRILEIADPTLWVHVDAEDSITRSRMQECLISVIGLGLSCSKHQPKERMPIQDAAL KMHAIRDDAYLMFSGSLSVDMEEETKQISSDLKQQ</aaseq>

Gene Sequence

<dnaseqindica>1028..3800#3901..4325#ttggacagatcgctcacgcgcgcgcttccgccggggtctcgtgctcacctccgggcaccgcctcgccgccgccgccggaatgcgccgtcactggaagccgtgctcagctccgacgcgtacgatgcccaatcctgtatactttttcttcttcgagactcccgtcgctgtagccacaacaattctccagagactcggagttctcagtctgcgcccgttacctgttcgacagaactcctccgaggagcttactgtccctggccctttgactaaggtgagcatccaattggttaatctccataaattttccacgccacggaccttttcaagtttgtacatatgtggaaagacatggccgtgcctgctgtaattctcgatttctcgttgttcccaggaggctcggtgttgttcgtttttgtgctcgtcaactgtagttgtccatgctttcacggaagctctacacaagctgaatctaatcctggatcaccacaagacttttacctttcctcgtgtgtctggaactccgcatacaagcgtggaaaagggtggccgtacaactgtacaaggtaacactctggactgccaacctaatggattctctgttggaatcagtcaggaagaaattatcaggaatttggtcgaacagagaaggggtgaggacataattggagcgagctaagtcatgtgtgagggccgagggcgacagcgacgagagcttggatgcgtccaagctttccatatccttccagtactatgttacagtaagtatctagttgggaaatgatgtggaaaggaatggcgggaacagtcaaaaaggtaacatgcactgctccaagtcgacatggtatcttaccactcctgtctctctccctgtgagcgcggagaccgctaaacaagtcaagattttgactcggtgtcctcgccgtctcgccaatggcactctgggatcatggcgtcgtggggttaaaatacggtgctctggggcactgcttgtcactccacttgtgtaccttgcaagtttgcaaccaccatggcgatggctcttgctagcttcctgctgctgctgctgtccgtcttcatgtccatcttcttgcacttcatggcagtgcgaggagcagacggagaagacgccgcagcgttgctcgctttcaaggccgtggcggtgggcaacggtggtggcaacggcgtgcttgcgtcgtggaacggcagcgccgggccgtgcagctgggagggcgtggcgtgtggccggcacgggcgggtggtggcgcttagcctgcccggccatgatctctcggggaccctgtcgccggccgtcggcaacctgacgtcgttgcggaaacttgacctgagttacaactggctgcacggtggcatccccgcgagcctcggtcagctgcaccgcctcagggaactcgacctaagcttcaacaccttctccggcgaggtccccagcaatctgacatcctgcaccagcttggaatacctggccctcggcagcaacaagctcgccgggcacataccttcggagctcggcaacacgctgacacagctccaggtgctaggcctcgacaacaacagcttcgtcggccattggccagcttcactggccaatctgacgtccctgggatacctcagcctcaggatgaacagtctcgagggcacaatacctcctgaattcggcagcaacatgccgcgcctttacttcctcgacatctgctccaacaacctgagtggtgcactcccgtcttccctgtacaatctgtcgtcgctaatggggtttgatgcaggaaacaacaagctggatggaagcattgctactgatatcgatgaaaagtttcctcatttacagtctttcgcagtgttcaacaaccagttcagcggggaaattccctcctcgttctccaatctcactaacctcacgagtctgcagctatcaatgaacggatttagtgggtttgtgccacataatctagggaggttgaatgctctgcagaatctgcaactaggtgttaatatgcttgaagcaggggacataaaggggtgggaatttgttgagtcattgacaaactgcagtaagctagagattttagttctcagtaacaacaatttcactgggcagttccctatttcgatcgcaaacctctcgaagactctccaaaaactttacttgggtggcagtaggatttctggaagcatcccctctgatttcggtaatttggttggtctaagatcattatacctgtttagtactgacatatcaggtgtaattccagagagcattgggaagctggaaaacttgactacgctatacctgaataacaatagcttgtctggccatgtaccgtcttctgtaggaaaccttaccaatctgatgaagctattcatgcaaggcaacaacttggaaggaccaatcccagcgaatcttggtaagctgaaaagcctgaatgttcttgatttatcaagaaatcacttcaatggttcgattccaaaggaaatattggagctgccttccatttcacagtacttgaatttatcatacaactccctctctggaccccttccttctgaagttgggagtttgactagcctcaacgagttgattctgtcaggaaaccaattgtctggccagataccaagtagtataaaaaattgcatagtgctcactgtacttttattggacagtaactcgttccaaggaactatacctgtgtttctgggggacattaaggggctccgtgtacttaacctaaccatgaacaagttttctggtgtgattcctgatgcccttggtagcatccacaacctgcaagagttgtatctagcgtataacaacttgtctgggcctatcccagcagtgctgcagaatttgacatcgttatcaatgctggatctatccttcaatgatctgcaaggtgaagtgccaaaagaaggtatttttaagaacttatcttacttgtctttagctggaaacagtgagctttgtgggggaatatctcatcttaacttacctccatgctccatgcatgctgttagaaagagaagcaaagggtggttaaggtctcttaaaatagctctggcatcaatagctgtggtcttgttcttagctctagttatggtgattattatgttaattcgtcgtagaaagcctgtacataggaagaagggccagtccctaaccccagttgtggaggaacaatttgaaagagtttcttaccaggaattgtcaaatggaaccaagggattttcacagaacagtttgcttggaaaaggaagctatggtgtagtctataaatgcactttgtttgatgaggaaattgttgtcgctgtaaaggtgtttaaccttgaacggtctggatctactagaagttttctggcagaatgcgacgcactgagaagtgtgcgccaccgttgtctcctaaagatcatcacttgctgttcaagcataaataaccaaggtcaagatttcaaggcactagtttttgagtttatgcccaatggcagcttaaatggttggcttcatccaaaatctgatatgcccattgctgacaatactttgagcctaactcaaaggctggacattgctgttgatattgtggatgctctggaatatcttcatatccactgccagccgccgatcgttcattgtgatctcaagccaagcaacatccttcttgcagaagacatgagtgcccgagttggagatttcggcatatcaagaatcctaactgaaagcgcgagcaaaacacagcaaaattcaagcaacacaatcggaataagaggttccattggctatgttgctccaggtaactgaattgttatgctttgtttctttgctttttacctcctagttcttacacaaatttaacattccggtgaatctaatgaactccaaaatatttgtagagtatggggaaggctctgcggtctcaactcttggcgatgtttatagtctgggcatattgctgcttgagatgtttacaggaatgagcccaacagacgatatgttcagagattccttggacctgcacagtttctcagaggctgctcatcctgacagaatcctggagatagccgatccgacgctctgggtgcatgtagacgccgaggatagcatcacaagaagcagaatgcaagagtgtttgatttcagtcattggcctcggcttgtcctgctcaaagcatcaacccaaagagcgaatgccaatacaagatgcagccctgaagatgcatgcgatcagagacgacgcttacctgatgttttctggctctctttcagtggacatggaagaggagacgaaacaaattagcagcgatttgaagcaacagtgagtaactaggcctgaagagtgtacaagaataagatatgcttgctggggaaaatgttttaacagctcagctgccgatggcgacttgccagaattccgagaaacaaaagctgagacgctgaagatgtagcattttccttcgtggttcatatcagtcagtctttatttgcgtcagttcatatggctatatgtaatgtaagctaatagaacgttcagtaactgccgatgtgtacattacaaccaatacggcaatactactatgtggagaactgtcagaaagatttttgactgttcatccttttcgtacaaaatgaaaattcaaatcatacctgtaatcacacatgaaaatcagattatgagattgcgccacgtttttgtgggacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0152000, RefSeq:Os01g0152000