Os01g0156000

From RiceWiki
Revision as of 04:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0156000| Description = Similar to Myb family DNA-binding protein| Version = NM_001048603.1 GI:115434619 GeneID:4324082| Length = 1869 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0156000

Description

Similar to Myb family DNA-binding protein

Version

NM_001048603.1 GI:115434619 GeneID:4324082

Length

1869 bp

Definition

Oryza sativa Japonica Group Os01g0156000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3002860..3004728

Sequence Coding Region

3003096..3003149,3003245..3003304,3003431..3003552,3003669..3003794,3003890..3003988
,3004131..3004386,3004501..3004704

Expression

GEO Profiles:Os01g0156000

Genome Context

<gbrowseImage1> name=NC_008394:3002860..3004728 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3002860..3004728 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggataggaacacgaacaacaacagcaacagcagcagcagcagcgagatgccggggaagaaggccaggaagccgtacaccatcacgaagccacgggagagatggagcgaggaggagcacgagaggttcctcgacgcgctcatcatgtacggccgcgactggaagaagatcgaggagcacgtcggcaccaagaccaccatacagatccgcagccacgcgcagaagtacttcctcaaggtgcagaagatggggctcgccgccgggctgccgccgcagtacccgaggcggaggctcgtcatgcagcagcagcagcagcagagctcgccggcggtgagcagctcggtggcggcgacggcgatcctccacgggcagccgcagtgcttgccgccgcatcacaacgtcgctgttcagagctccatcggttgggagtgtcccggagttcttcctcctgcaaccaatgacatgcagaacttggaatgggcaagtacttcaggcactgcagcctgggggaaccatcacggcctgattgaaccaccagcagcatttgtttcatttcctggtgaaagttcattcatgggggcagcaagtttcagtaatacgagcatggactggactggcaccacaagtgaaatggcaacagccagcattgtgcaggatgaaacgatcgagcttccactatcacctgatgatctgcaatttgcacaagtatacaggttcatcggcgacattttcgatccagactcgccgtgtccagtggaaacacaccttcagaaactgaagagcatggatgatatcatcgtgaagacgatactgttggtgctaagaaatctcgaagacaacctgttatcccctcagtttgagcctattagaaggttgctgtcgacgtatgatccgaaccgaggactgtctggccatttgtag</cdnaseq>

Protein Sequence

<aaseq>MDRNTNNNSNSSSSSEMPGKKARKPYTITKPRERWSEEEHERFL DALIMYGRDWKKIEEHVGTKTTIQIRSHAQKYFLKVQKMGLAAGLPPQYPRRRLVMQQ QQQQSSPAVSSSVAATAILHGQPQCLPPHHNVAVQSSIGWECPGVLPPATNDMQNLEW ASTSGTAAWGNHHGLIEPPAAFVSFPGESSFMGAASFSNTSMDWTGTTSEMATASIVQ DETIELPLSPDDLQFAQVYRFIGDIFDPDSPCPVETHLQKLKSMDDIIVKTILLVLRN LEDNLLSPQFEPIRRLLSTYDPNRGLSGHL</aaseq>

Gene Sequence

<dnaseqindica>1580..1633#1425..1484#1177..1298#935..1060#741..839#343..598#25..228#gatttggggactggagttgtgttgatggataggaacacgaacaacaacagcaacagcagcagcagcagcgagatgccggggaagaaggccaggaagccgtacaccatcacgaagccacgggagagatggagcgaggaggagcacgagaggttcctcgacgcgctcatcatgtacggccgcgactggaagaagatcgaggagcacgtcggcaccaagaccaccatacaggtacgtacgtagctggacacaatcgtgctcaaattaagctactactcgatttggtttctgatgaagattgcaatgctgattgaaacaatgtgcgattgatcgatgtgtgtgcagatccgcagccacgcgcagaagtacttcctcaaggtgcagaagatggggctcgccgccgggctgccgccgcagtacccgaggcggaggctcgtcatgcagcagcagcagcagcagagctcgccggcggtgagcagctcggtggcggcgacggcgatcctccacgggcagccgcagtgcttgccgccgcatcacaacgtcgctgttcagagctccatcggttgggagtgtcccggagttcttcctcctgcaaccaatggcaagtgcacatatccaaatcaccattagcaattgtcagttgatctagattcaaattgcgatcggtgatgtcatcatcaaagatgcactcgatagttaattactagtgatttgacagtgttttgtggtaattcttttttcagacatgcagaacttggaatgggcaagtacttcaggcactgcagcctgggggaaccatcacggcctgattgaaccaccagcagcatttgtttcatttcctggtaattatgccggtcaacaaatcgcctttcgatcttagtcacggagctgcaaccaaaatgccatgagaaataactttttctttacgatgattcaggtgaaagttcattcatgggggcagcaagtttcagtaatacgagcatggactggactggcaccacaagtgaaatggcaacagccagcattgtgcaggatgaaacgatcgagcttccactatcacctggtaataattctacgtcgtctcttgaaagatcaaaattattctcagggaatcagggattaacaatgcattgctgctgaaaaactgtaagctgaatgattttttttcactgttttcagatgatctgcaatttgcacaagtatacaggttcatcggcgacattttcgatccagactcgccgtgtccagtggaaacacaccttcagaaactgaagagcatggatgatatcatcgtgaagacggtaagtacagcaatactagctttctgaacaaagttttctcccgattttttgactggagataagtactgtcataattttctatgattaaaaatgaatccttctaagtaatacagttacttaatgcagatactgttggtgctaagaaatctcgaagacaacctgttatcccctcagtttgagcctattgtaagtagcattctctgaacttttcatcttttttttttccttcgcagtttctgaatttaccttgcctaatttatctggtaatgatctttctacagagaaggttgctgtcgacgtatgatccgaaccgaggactgtctggccatttgtagagtttatagcctggaaactgcaactaacacacggataggaagttcaagtgtacctgtatctgtatgtctgaagaattgattagaagctggaaacaaaatatgtccgaccagagttttgcctggttgacatatatagccttatgattctttgaagagctagacatagatcgatgattgtttgtaaagggcctacttggaacatgttcagagtctcaaatactatagttttttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0156000, RefSeq:Os01g0156000