Os01g0158900
| Gene Name |
Os01g0158900 |
|---|---|
| Description |
Zinc finger, RING-type domain containing protein |
| Version |
NM_001048615.1 GI:115434643 GeneID:4324058 |
| Length |
5436 bp |
| Definition |
Oryza sativa Japonica Group Os01g0158900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:3084452..3089887 |
| Sequence Coding Region |
3084821..3084988,3085069..3085155,3085270..3085476,3085904..3085985,3086085..3086275 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:3084452..3089887 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:3084452..3089887 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccattctcctacgccgccgcggcctctggctccgcgtcctcttctcgcaagccggttcccgtcgccgcggccgccgcccgccgacccgcgccctcgccggcagcggcggcggcacccgcgccctcgccgtcaaaccctagcgcggtctccgattccgacccctcctcgtactcctcctccggggaggagaccgacctcaccgcctccgatccggcggccgcctccgtcatctcctcctacctctccgttgcgggggatggcgccgacctctccaaggtcgggatcttcctcagctccgcggcgcgccgccgatcgccgccgtgcctgatatgcttcgatcccatccgcccctccgaccccgtctggtcctgctccgcctcctgcttcgccctcctccacctccactgcatccagtcatgggcacatcagtcatcctctgccgcgccttctcccacctggggttgccccaaatgccgcttcccctatcccaaatcccagactcccacctcctacctctgcttctgctccaagacggtagacccagctccggacccctggatcctcccccactcctgcggcgacgtctgtggccgacgtctcaatgcagaccgtgactctggctgtgagcacaactgcctcctgctttgccaccctgggccatgtccaccgtgcccggcaattgttccaaatgctatgtgcttttgcggctcacatcgtgagacgcgtcgatgctcacatcagcgttattcttgctcggggaaatgcaataaacgcctcggctgtggaatccaccggtgtcctgtggattgccatgatgggccttgcccgccttgtgcggtgcgaggaaagcacaaatgtgagtgtggagaaacaatggaggagaggctatgctctgaaagggtgttccagtgcaagagggagtgtggtgggatgttgcagtgtgggaagcatagttgtgagaggggttgccatgctggaaagtgtggaggatgcccactccaagggcgacgaacttgcccatgtgggaagaaagattatccaagtttggactgtgatgcagaggctgccacatgtggatcaacttgcgagaaggtgcttgggtgcgggcggcacaaatgcccagagcggtgtcatcgtggttcatgcgttgagacatgtcggcttgtgatcacaaaatcgtgccgctgtgggggtctcaagaaggaggtgccttgctaccaagaattgacatgcgaaaggaagtgtcagcgtttgcgaaactgtggccgccatgcttgtagacgacgttgctgcgagggtgattgtgcaccctgcccagaggtttgtgacaagaggctcagatgtggcaaccataaatgcctatctccatgccacagaggtgcttgtgcaccttgtcctttgatgaagaccatttcatgcaactgtgggcaaacattttttgaggtgccctgtgggactgagaagaatcagaagccacccaaatgctcaaaaaaatgcaatatagctcgcctttgcaggcacaaacttgaatgccggccccacaagtgccactatggagcttgcccaccttgcaaactaatctgcggagaagaactttcttgtggccacaggtgtaagctgaggtgtcatggccccattgctcctccaaatcctgagttcacactgaaaccaataaaaaggaaaaagggaaagcatatagactctacacctggaacaccatgcccgccatgccaagaagttgttttggtgccatgctttggacatcatcttggccaagaacgtgcaatactttgctccaaaaggaggcagtttccatgtcagaatttatgtggtaaccctctcaactgtggcaatcattattgtacgaaggcttgccatgtgttacagattccattgagtcagcctgaaggagatcaatcggctatactgtctcttgctagtgcaagtgcattcgctgagccttgcgaagaatgtaacctgccttgtcaaagggtcagggagcctccatgttcacatccctgccctttgccatgccatcttaacgattgtccaccttgcaaagcccttgttaaaagaccatgtcattgtggtgctatggtacacgcttttgagtgcatgtattataacaacttaaatgctacaaaacagcagaaagtaaggtcctgtggtggcccatgtcatagaaaattaccgaattgtccccatctgtgctcagaaatatgtcaccctggtcagtgcccatcagttgatcagtgcatgaaaaaggtcaatgtccgttgtgcatgcaacaaccttaaaaaagagtggatatgtcaagatgttctgaaggaataccgtcagtctggtcgtgacccaaaacaaatacctaaaaatcaatatgcagttggcctacttgcctgtggtgaagattgtgttaaaaaggttaaagctgcagattctgagttgcatctccggaaaattcaggagatcaagacccctgctgtggaagttgaaaatgtgcccaagcgcaggaagaggcgtaaccgtggccaagaaagtgttgaaagctcaaaattccaggaaatcaaagctgttgcgttgaaatttctcctggttatttttctgtgcataatcgttgtagctggattgtaccttttgtggaaaggtgtttaccggctttctgattggatgaatgacatggaggagcagagggccaggcagaggcatttgaagcctggaagattgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MPFSYAAAASGSASSSRKPVPVAAAAARRPAPSPAAAAAPAPSP SNPSAVSDSDPSSYSSSGEETDLTASDPAAASVISSYLSVAGDGADLSKVGIFLSSAA RRRSPPCLICFDPIRPSDPVWSCSASCFALLHLHCIQSWAHQSSSAAPSPTWGCPKCR FPYPKSQTPTSYLCFCSKTVDPAPDPWILPHSCGDVCGRRLNADRDSGCEHNCLLLCH PGPCPPCPAIVPNAMCFCGSHRETRRCSHQRYSCSGKCNKRLGCGIHRCPVDCHDGPC PPCAVRGKHKCECGETMEERLCSERVFQCKRECGGMLQCGKHSCERGCHAGKCGGCPL QGRRTCPCGKKDYPSLDCDAEAATCGSTCEKVLGCGRHKCPERCHRGSCVETCRLVIT KSCRCGGLKKEVPCYQELTCERKCQRLRNCGRHACRRRCCEGDCAPCPEVCDKRLRCG NHKCLSPCHRGACAPCPLMKTISCNCGQTFFEVPCGTEKNQKPPKCSKKCNIARLCRH KLECRPHKCHYGACPPCKLICGEELSCGHRCKLRCHGPIAPPNPEFTLKPIKRKKGKH IDSTPGTPCPPCQEVVLVPCFGHHLGQERAILCSKRRQFPCQNLCGNPLNCGNHYCTK ACHVLQIPLSQPEGDQSAILSLASASAFAEPCEECNLPCQRVREPPCSHPCPLPCHLN DCPPCKALVKRPCHCGAMVHAFECMYYNNLNATKQQKVRSCGGPCHRKLPNCPHLCSE ICHPGQCPSVDQCMKKVNVRCACNNLKKEWICQDVLKEYRQSGRDPKQIPKNQYAVGL LACGEDCVKKVKAADSELHLRKIQEIKTPAVEVENVPKRRKRRNRGQESVESSKFQEI KAVALKFLLVIFLCIIVVAGLYLLWKGVYRLSDWMNDMEEQRARQRHLKPGRL</aaseq> |
| Gene Sequence |
<dnaseqindica>4900..5067#4733..4819#4412..4618#3903..3984#3613..3803#3272..3478#3017..3179#2834..2919#2611..2703#2294..2360#1928..1983#1740..1853#81..1289#agtctgacagcaaaaggccacactcctcacaaatctcgtgcgcgccaccgtcatctccggcgaccacctcaccgccggccatgccattctcctacgccgccgcggcctctggctccgcgtcctcttctcgcaagccggttcccgtcgccgcggccgccgcccgccgacccgcgccctcgccggcagcggcggcggcacccgcgccctcgccgtcaaaccctagcgcggtctccgattccgacccctcctcgtactcctcctccggggaggagaccgacctcaccgcctccgatccggcggccgcctccgtcatctcctcctacctctccgttgcgggggatggcgccgacctctccaaggtcgggatcttcctcagctccgcggcgcgccgccgatcgccgccgtgcctgatatgcttcgatcccatccgcccctccgaccccgtctggtcctgctccgcctcctgcttcgccctcctccacctccactgcatccagtcatgggcacatcagtcatcctctgccgcgccttctcccacctggggttgccccaaatgccgcttcccctatcccaaatcccagactcccacctcctacctctgcttctgctccaagacggtagacccagctccggacccctggatcctcccccactcctgcggcgacgtctgtggccgacgtctcaatgcagaccgtgactctggctgtgagcacaactgcctcctgctttgccaccctgggccatgtccaccgtgcccggcaattgttccaaatgctatgtgcttttgcggctcacatcgtgagacgcgtcgatgctcacatcagcgttattcttgctcggggaaatgcaataaacgcctcggctgtggaatccaccggtgtcctgtggattgccatgatgggccttgcccgccttgtgcggtgcgaggaaagcacaaatgtgagtgtggagaaacaatggaggagaggctatgctctgaaagggtgttccagtgcaagagggagtgtggtgggatgttgcagtgtgggaagcatagttgtgagaggggttgccatgctggaaagtgtggaggatgcccactccaagggcgacgaacttgcccatgtgggaagaaagattatccaagtttggactgtgatgcagaggctgccacatgtggatcaacttgcgagaaggtgcttgggtgcgggcggcacaaatgcccagagcggtgtcatcgtggttcatgcgttgagacatgtcggcttgtgatcacaaaatcgtgccgctgtgggggtctcaagaaggaggtacaatatatcacacgttttttatgtcaaaattcttaaaaggaaggaaacaaggaatatgtttaaacccttcaagcagataaattaaacaaatcaattccttggttgtctaaaatgcaaaaagcaattagagaatgtcattgtcaattatgtttgatacattattagttaaaatgccttttaagttacttcacatagttctctatagttctaccgacctatttctatatttggaggcaagtatgcttcaaccgttctgagtggaaacaaaacagagtaaaaataagtaaaatcttctttctttatgttacctcaatctgggccagtatagtaaatactggttgtgcaccatcctagcgctggtattgaatgtggagggctgcagcttttgagtacttctctcttattagaatgcaaaccaaatttgttgttcatgtgatgctgcatcaggtgccttgctaccaagaattgacatgcgaaaggaagtgtcagcgtttgcgaaactgtggccgccatgcttgtagacgacgttgctgcgagggtgattgtgcaccctgcccagaggtaaatcctttctttggggggtgtgatgtattgatacctatcaattactaaagtagatttatttctgtttgtaggtttgtgacaagaggctcagatgtggcaaccataaatgcctatctccatgccacaggtattctcttaatcaaatatacatctttggcttgccatgttgaattgtttagtgctagtactgctaattgcattggtgcataccttttatacatatgttcccattttgagccatatttttgcaatggatgtaccacattgccatgataggttccacaaatttaagaatgctgttttgctctcagacatttgcactttattctcttttattccaaatttcaagactaattcaatgtcccgaatcataaatattcttgtttatccaaactgctaatatatgtgacaatatttttcttcattttgtttaacagaggtgcttgtgcaccttgtcctttgatgaagaccatttcatgcaactgtgggcaaacattttttgaggtggaattcggtacactctaaatatgttgtttgtttcttatgcatcccatgtttgatgatcacagcacttcacttgaacagcaagtttacaggaaaaaaagatattcagttagcattaggagtaccattgttttcatatgattttatgtactttgttaaaaaagttaattcttgtccgatccttccacacaaaacttgccttgtgactcgacttcttgtccaaaattcgtatgcacaactttgtatgtaggtgccctgtgggactgagaagaatcagaagccacccaaatgctcaaaaaaatgcaatatagctcgcctttgcaggcacaaacttgaatgccgggtaaacaattacatatctctgctttaaccttatcattaatgataatctcatctattttgtgtttagaaatttatcctggagcattttggggttctcttctataaattaatcctcagaattttcttcttagccccacaagtgccactatggagcttgcccaccttgcaaactaatctgcggagaagaactttcttgtggccacaggtgtaagctgaggtttgtattttgactattttctgaatgtgccagtgttggtaatttgccccaggagtatatccttctgatatgtaaccatccgctcgcactctgccaggtgtcatggccccattgctcctccaaatcctgagttcacactgaaaccaataaaaaggaaaaagggaaagcatatagactctacacctggaacaccatgcccgccatgccaagaagttgttttggtgccatgctttggacatcatcttggccaagaacgtgcagtaagtttcacccttcctcacacatccacactcatatgtgtgctccgtgattgctgagtgcctgagtgcatacaaattctttctccctgcagatactttgctccaaaaggaggcagtttccatgtcagaatttatgtggtaaccctctcaactgtggcaatcattattgtacgaaggcttgccatgtgttacagattccattgagtcagcctgaaggagatcaatcggctatactgtctcttgctagtgcaagtgcattcgctgagccttgcgaagaatgtaacctgccttgtcaaagggtcagtgttctttattgtccttagcaataactttggtttagttctgtttacagacttttaatgtgaaattttgtgcatggttccacatcttttaactttggtgcagcatatttggtatttaccatttctttcaggtcagggagcctccatgttcacatccctgccctttgccatgccatcttaacgattgtccaccttgcaaagcccttgttaaaagaccatgtcattgtggtgctatggtacacgcttttgagtgcatgtattataacaacttaaatgctacaaaacagcagaaagtaaggtcctgtggtggcccatgtcataggtcagttacttttttcctcggtcctatcatcttttttgaatgttggtaacattttccattgctgattttgtaagtttctttcatctgttctttttgcagaaaattaccgaattgtccccatctgtgctcagaaatatgtcaccctggtcagtgcccatcagttgatcagtgcatgaaaaaggtatcttggtgaaactagagttacctaattggcatgatatcacttggtaggcatatatttacattacataattagcatgacattattagcaacctgttctgtggcttagcgatactacaatttttacttgatgaaactggagtaaggtttggaactttgggatatggtccacttatgttctatatatatttttagcgagatcaatcacagaataccatagttgtttttacctctttcatgtaatgtaattaggcactaggctttctcttttctgtccttgtgcgctatcacaagaactttgctgtttttcttgaagaacttgcttaatgaaggcagagctgcttacactttacctaaaaaaaatcacaacatacttttgaaaatatgtattaatacatgttcctctacctatctgatatccattaaggtcaatgtccgttgtgcatgcaacaaccttaaaaaagagtggatatgtcaagatgttctgaaggaataccgtcagtctggtcgtgacccaaaacaaatacctaaaaatcaatatgcagttggcctacttgcctgtggtgaagattgtgttaaaaaggttaaagctgcagattctgagttgcatctccggaaaattcaggagatcaaggtactggaccttaccatctgaaccaaacttcataagttgttacactgttgtgcaaacaatcagctcttgtagttatttttgcttctgtgcttattggctgtaatttccatgtagacccctgctgtggaagttgaaaatgtgcccaagcgcaggaagaggcgtaaccgtggccaagaaagtgttgaaagctcaaaattccaggtgtgctagatactgatgtgctggtttgttatttgggttcgctaagcatgcgttccttacatgaactttatatattgcaggaaatcaaagctgttgcgttgaaatttctcctggttatttttctgtgcataatcgttgtagctggattgtaccttttgtggaaaggtgtttaccggctttctgattggatgaatgacatggaggagcagagggccaggcagaggcatttgaagcctggaagattgtaaattaaagactacggagggtgtttgtggaatattcacaactgagatgtgcatcggttcaccgtcagggattggtttcggatatatggtagtgaaagatgtcatcattttgttattggagccaagccccggagtttgtaactagtttggtctcttgtccgaagctactggttaatggaaactaaagttatccgtgtcaaaagaaagatatcattttgttctttgtttgccaaacaaaatgtaggaactcaacaaccttgtactgtagtttacatgcatactgtgttcgagtgaattaagggtgtgtttagttcacgtcaaaattagaagtttcattgaaattgaaacgatgtgatggaaaagttagaagtt</dnaseqindica> 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| External Link(s) |
