Os01g0166800

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Revision as of 04:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0166800| Description = Conserved hypothetical protein| Version = NM_001048653.1 GI:115434719 GeneID:4327146| Length = 3780 bp| Definition ...")
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Gene Name

Os01g0166800

Description

Conserved hypothetical protein

Version

NM_001048653.1 GI:115434719 GeneID:4327146

Length

3780 bp

Definition

Oryza sativa Japonica Group Os01g0166800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3424794..3428573

Sequence Coding Region

3424951..3425065,3425191..3425258,3425362..3425586,3425669..3425804,3425905..3426107
,3426227..3426340,3426432..3426506,3426625..3426783,3426868..3426993
,3427227..3427274,3427366..3427491,3427611..3427718,3427800..3427913
,3428320..3428496

Expression

GEO Profiles:Os01g0166800

Genome Context

<gbrowseImage1> name=NC_008394:3424794..3428573 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3424794..3428573 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggggccgcagtacgacctcgtcgggaaccccctgggggcggtgcgctccaccttcgagagggcggcggcggagtccggtgggcacgagccggtggcggcgttccgggggaaagactggggcgccaccgaggtgttccgctcctttctcttcgagcaaggcgggcttgacaaggttccggtgttggatgaatcaaatcttggattgatcaagccgaatacccttgttcggttccgggggatggttcaggacatgctcgggaacgagttctatgttggtgctttcaaggatggctccacttggaggacaaacaaattctccgattcctcgccgttctcaatgccacacccttgtgattcacatctctgggagcgccatcttttccactgtgtgcctgtgcctggacaaaattcttggacacgcgagtcgtcccctggccctgacttgcgcagaatagcaagctgcttcacatctgaacaaagggagaaaaggaagaggggtgcagataatgacgccatggatgtttcagaaagtggtagtggagagacttcttcatccagcaagaagacgaaggatgatggtgtcaagatctcaaatagttcagtagaaatgtcaatgaatgaagaacatcatgtcccagagatgaatgggggagatcatcatattcctggaagctccttttcctgcctagtgaaggtgtatgatatgcctgaaagtcaggtgaaactgaacgatgtttctgagttcataggtgtatatacatttgaccctgaacttgctgctcctaacgataattcggatgatataatgtttgaccttatggaagatgtaaccgctcagctgcctcccagtaaggttccccgtcttcactgcttggtatggagaaacttatctgctcatgattttctaccaaggcctcctgcggttgagccatcaccaatcctgctaaggggaattcggcaatctttgctctcacatcttactctggtattagggaaagatgaactggcagctcaatgtttactgttgcatcttctatccagacttcgtaataaggtggatgtggttaccgttggtaggctctccttgaatttcactggctttaacagagagagtgtttctatatttggaaaccagctaaataatttgttccagaggctactaccatattcacaagttattcctctgtcaattgagtatctcaacacagccacacttcagcctagaaaggacaaccaatcaggaagattggttacaggagttttacagttacctcagggtactcacctgacctttgatgagactctcttgcagtctggatcattgacatccaaaggtgtcgagaatactatgctgcttaagaacttgatggagtcacagaaggttgagtatgattttgagttctacaagttggaaatggcaactgatgtgcagctactaattctctccgagggaaaatcaaatatcctaccttctgacttgatagtacctttccgcccatcatctgttcctgcggtaaatgcaagctccgaggaacttgaaagttggagatggtatttggccacagttaggtctcttcctcagtcaactgaaactgatacataccagatgattcaagatgaaatggtcaatgccatgcgtgatgataggagcttgggttgttctgaacttagcagatggctaacgatggcacagataatggctgcaagctttggtgagaagagtctctccatggagcactggcagatggtgaaggagctggagaggctcaggaaggagaggctacaatga</cdnaseq>

Protein Sequence

<aaseq>MVGPQYDLVGNPLGAVRSTFERAAAESGGHEPVAAFRGKDWGAT EVFRSFLFEQGGLDKVPVLDESNLGLIKPNTLVRFRGMVQDMLGNEFYVGAFKDGSTW RTNKFSDSSPFSMPHPCDSHLWERHLFHCVPVPGQNSWTRESSPGPDLRRIASCFTSE QREKRKRGADNDAMDVSESGSGETSSSSKKTKDDGVKISNSSVEMSMNEEHHVPEMNG GDHHIPGSSFSCLVKVYDMPESQVKLNDVSEFIGVYTFDPELAAPNDNSDDIMFDLME DVTAQLPPSKVPRLHCLVWRNLSAHDFLPRPPAVEPSPILLRGIRQSLLSHLTLVLGK DELAAQCLLLHLLSRLRNKVDVVTVGRLSLNFTGFNRESVSIFGNQLNNLFQRLLPYS QVIPLSIEYLNTATLQPRKDNQSGRLVTGVLQLPQGTHLTFDETLLQSGSLTSKGVEN TMLLKNLMESQKVEYDFEFYKLEMATDVQLLILSEGKSNILPSDLIVPFRPSSVPAVN ASSEELESWRWYLATVRSLPQSTETDTYQMIQDEMVNAMRDDRSLGCSELSRWLTMAQ IMAASFGEKSLSMEHWQMVKELERLRKERLQ</aaseq>

Gene Sequence

<dnaseqindica>3509..3623#3316..3383#2988..3212#2770..2905#2467..2669#2234..2347#2068..2142#1791..1949#1581..1706#1300..1347#1083..1208#856..963#661..774#78..254#accacttctcccgccattgctccgctccccaatctccccaacgagagagagagagagcgaggagagggagagggaggatggtggggccgcagtacgacctcgtcgggaaccccctgggggcggtgcgctccaccttcgagagggcggcggcggagtccggtgggcacgagccggtggcggcgttccgggggaaagactggggcgccaccgaggtgttccgctcctttctcttcgagcaaggcgggcttgacaaggtaagaagtctgatccccccccgtgttgatggttgccgcagctgtcgatttctgaaaatgatgttatttggtagatcgctgaaaccctaatatcgtcaaagttagtgatctttgaatgtctataatgaatatgagacggggagattaaaggttttcttagggtaaatttggaatcatcagtagatgtggttaggaagtactatgctctcagatctaagttgggtgaaagataactgctttttgctgttcttgcaaacatttcaattcagatacttagaatgtcacatatgtttatgttgagcttgtcccaaaaaaaagagagaaagaggatattttgtattgtgggtgtaaatgaatcttaggaagttcagggaatgacggaatgtgggaatattttcctttccaggttccggtgttggatgaatcaaatcttggattgatcaagccgaatacccttgttcggttccgggggatggttcaggacatgctcgggaacgagttctatgttggtgctttcaaggtattggaatttagtacataagttaatgtaaagctgcattttagtgcttgttatgcttattttgaaccattatttgtgtaggatggctccacttggaggacaaacaaattctccgattcctcgccgttctcaatgccacacccttgtgattcacatctctgggagcgccatcttttccactgtgtgcctgtatgttgccgcttccaagagcacctgctgctcatttgctattaatcctagtcttactcattgctgataagcagcttatgttggaattcaacctggacaatgccattggtttatttcaggtgcctggacaaaattcttggacacgcgagtcgtcccctggccctgacttgcgcagaatagcaagctgcttcacatctgaacaaagggagaaaaggaagaggggtgcagataatgacgccatggatgtaagcttttgctaagtttgttgcaatggtttcttttgacactttgctgcctaacaagtagtattgtcgtctaatgagttgactgatgcaggtttcagaaagtggtagtggagagacttcttcatccagcaagaagacggtaagaaggaagattgatttttctttcctagtagtctcctaacatttacacagtctcgcaactgccttgcttggttgtagattaattctgcatgctaataaagtaggataacttaaatgtcttagtagatttatggcatatatgcttctccaaattgcttggtttcatgctaaatctaatccatacagttagctgactgggaatctgatttaaactgccttacttttcctcagaaggatgatggtgtcaagatctcaaatagttcagtagaaatgtcaatgaatgaagaacatcatgtcccagagatgaatgggggagatcatcatattcctggaagctccttttcctgcctagtgaaggtagagctcctaagctttctgcatgaaatgcattctattcaatcttttttttctatggtttacggattgaactattctttgcaggtgtatgatatgcctgaaagtcaggtgaaactgaacgatgtttctgagttcataggtgtatatacatttgaccctgaacttgctgctcctaacgataattcggatgatataatgtttgaccttatggaagatgtaaccgctcagctgcctcccagtaaggtacatgcatcaaaagtacatactacatagtgatcaatttcatatctaacaatgaaaagaaagtgtattcatatttgtatttttttctgacttctaatgcttgtaaatatttgtacaggttccccgtcttcactgcttggtatggagaaacttatctgctcatgattttctaccaaggcctcctgcggttgaggtacatagcactgaatcttgaatgcagaagttggtttaacagttttagcgttgatttaaaataactaatcccaattttttttatcatgcagccatcaccaatcctgctaaggggaattcggcaatctttgctctcacatcttactctggtattagggaaagatgaactggcagctcaatgtttactgttgcatcttctatccagagtacgtcatatcactaacacagctgatctatactacatcaagttgttttctttgcattgtaactgctaaaaacagttcatattagtttactaagttattggttctcaatctccatgcagcttcgtaataaggtggatgtggttaccgttggtaggctctccttgaatttcactggctttaacagagagagtgtttctatatttggaaaccagctaaataatttgttccagaggctactaccatattcacaagttattcctctgtcaattgagtatctcaacacagccacacttcagcctagaaaggacaaccaatcaggaaggtacatattgtttgtttgtcttatgaagaatttgttactcctgatgttttcatcattcaacaatcacttttaacataaccccacctaaattttgctgcagattggttacaggagttttacagttacctcagggtactcacctgacctttgatgagactctcttgcagtctggatcattgacatccaaaggtgtcgagaatactatgctgcttaagaacttgatggagtcacagaaggtaataagcctcatgacttcatgaggctacaaattatctttgccgaccaatttatctataacatctttaaacatttttgcaggttgagtatgattttgagttctacaagttggaaatggcaactgatgtgcagctactaattctctccgagggaaaatcaaatatcctaccttctgacttgatagtacctttccgcccatcatctgttcctgcggtaaatgcaagctccgaggaacttgaaagttggagatggtatttggccacagttaggtctcttcctcagtcaactgaaactgatacataccaggtgattatcccttgctcaactctatcaagaaataaactgatatgtttgtcaggaacatgaacagacttaattaaattgcataatgtttgcgccttaattgtagatgattcaagatgaaatggtcaatgccatgcgtgatgataggagcttgggttgttctgaacttagcaggtgtgtgccgctgatgcctgtcagtgtgggcaatctggcatcctacaccatctccagttacttttacatgaggattatgaaatgaaaccttttgctaaactaattctgcttatgtggatctgcagatggctaacgatggcacagataatggctgcaagctttggtgagaagagtctctccatggagcactggcagatggtgaaggagctggagaggctcaggaaggagaggctacaatgagatgagatcacagtaaaatgtgcttgtaaaatccacttgtggccgtggcccaatgttatgtgtataccactagggtctaaaatctaaatcaagatgtggatctgcaacatcttctgtgatcctatggaagtatcaatgccatttgataagttatctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0166800, RefSeq:Os01g0166800