Os01g0170000

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Gene Name

Os01g0170000

Description

Raffinose synthase family protein

Version

NM_001048672.1 GI:115434757 GeneID:4325200

Length

1218 bp

Definition

Oryza sativa Japonica Group Os01g0170000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3597451..3598668

Sequence Coding Region

3597652..3598668

Expression

GEO Profiles:Os01g0170000

Genome Context

<gbrowseImage1> name=NC_008394:3597451..3598668 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3597451..3598668 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aacggcaacggcgtgatcgcgagcatggagcactgcaacgacttcatgctgctgggcacggaggcggtggcgctgggccgcgtcggcgacgacttctggtgcaccgacccctccggcgaccccgacggcaccttctggctgcagggctgccacatggtgcactgcgcctacaactctctgtggatgggcgccttcatccacccggactgggacatgttccagtccacccacccctgcgccgccttccacgccgcctcccgcgccgtctccggcggccccgtctacgtcagcgacgccgtggggtgccacgacttcgacctgctccgccgcctcgcgctgccggatgggaccatactccggtgcgagcgctacgcgctgccgacgcgcgactgcctgttcgccgacccgctccatgacgggaagacgatgctcaagatctggaacgtgaacaagttctccggcgtgctcggcgcgttcaactgccagggcggcgggtggagccgcgaggcgcggcggaacatgtgcgccgcggggttctccgtccccgtcaccgcgcgcgcctcccccgccgacgtcgagtggagccacggcggcggcggcggcgaccgcttcgccgtctacttcgtcgaggcgcggaagctgcagctgctccgccgcgacgagtccgtcgagctcacgctcgagccgttcacctacgagctcctcgtggtggcgcccgtgcgggccatcgtctcgccggagctggggatcggcttcgcgcccatcgggctcgccaacatgctgaacgccggcggcgccgtgcagggcttcgaggcggcgaggaaggacggcgacgtggcggcggaggtggcggtgaagggcgccggggagatggtggcgtactcgtcggcgaggcctaggctgtgcaaggtgaacggccaggatgcggagttcaagtacgaggacggcatcgtcaccgtcgatgtgccgtggaccgggtcgtcgaagaagctgtcgcgtgtcgagtacttttactag</cdnaseq>

Protein Sequence

<aaseq>NGNGVIASMEHCNDFMLLGTEAVALGRVGDDFWCTDPSGDPDGT FWLQGCHMVHCAYNSLWMGAFIHPDWDMFQSTHPCAAFHAASRAVSGGPVYVSDAVGC HDFDLLRRLALPDGTILRCERYALPTRDCLFADPLHDGKTMLKIWNVNKFSGVLGAFN CQGGGWSREARRNMCAAGFSVPVTARASPADVEWSHGGGGGDRFAVYFVEARKLQLLR RDESVELTLEPFTYELLVVAPVRAIVSPELGIGFAPIGLANMLNAGGAVQGFEAARKD GDVAAEVAVKGAGEMVAYSSARPRLCKVNGQDAEFKYEDGIVTVDVPWTGSSKKLSRV EYFY</aaseq>

Gene Sequence

<dnaseqindica>1..1017#aacggcaacggcgtgatcgcgagcatggagcactgcaacgacttcatgctgctgggcacggaggcggtggcgctgggccgcgtcggcgacgacttctggtgcaccgacccctccggcgaccccgacggcaccttctggctgcagggctgccacatggtgcactgcgcctacaactctctgtggatgggcgccttcatccacccggactgggacatgttccagtccacccacccctgcgccgccttccacgccgcctcccgcgccgtctccggcggccccgtctacgtcagcgacgccgtggggtgccacgacttcgacctgctccgccgcctcgcgctgccggatgggaccatactccggtgcgagcgctacgcgctgccgacgcgcgactgcctgttcgccgacccgctccatgacgggaagacgatgctcaagatctggaacgtgaacaagttctccggcgtgctcggcgcgttcaactgccagggcggcgggtggagccgcgaggcgcggcggaacatgtgcgccgcggggttctccgtccccgtcaccgcgcgcgcctcccccgccgacgtcgagtggagccacggcggcggcggcggcgaccgcttcgccgtctacttcgtcgaggcgcggaagctgcagctgctccgccgcgacgagtccgtcgagctcacgctcgagccgttcacctacgagctcctcgtggtggcgcccgtgcgggccatcgtctcgccggagctggggatcggcttcgcgcccatcgggctcgccaacatgctgaacgccggcggcgccgtgcagggcttcgaggcggcgaggaaggacggcgacgtggcggcggaggtggcggtgaagggcgccggggagatggtggcgtactcgtcggcgaggcctaggctgtgcaaggtgaacggccaggatgcggagttcaagtacgaggacggcatcgtcaccgtcgatgtgccgtggaccgggtcgtcgaagaagctgtcgcgtgtcgagtacttttactagtgtggttcaatgctggaaagagactaagacaaaattttcggtctttttattttttattttacttaggtcggaaaataatttgagtgtgtgagagctttgtaagttgcttagctctggttggtttcggttggattatcattgttacgggttttaaacgctggttaatgtgaattaatgcaactatgcaagtgttactttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0170000, RefSeq:Os01g0170000