Os01g0173100

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Revision as of 04:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0173100| Description = Alba, DNA/RNA-binding protein family protein| Version = NM_001048692.1 GI:115434797 GeneID:4327120| Length = 1684 bp...")
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Gene Name

Os01g0173100

Description

Alba, DNA/RNA-binding protein family protein

Version

NM_001048692.1 GI:115434797 GeneID:4327120

Length

1684 bp

Definition

Oryza sativa Japonica Group Os01g0173100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3741778..3743461

Sequence Coding Region

3741949..3742044,3742170..3742234,3742377..3742439,3743057..3743105,3743202..3743387

Expression

GEO Profiles:Os01g0173100

Genome Context

<gbrowseImage1> name=NC_008394:3741778..3743461 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3741778..3743461 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggaggagatcaccgagggggtgaggaacctggccgtggagggggagcccgcggcggcggcggcggcggcgggaggtggtggtgagggggcgcagaggagggcggccgggagcagcagcaaccgcatccaggtgtccaacaccaagaagccactcttcttctatgtcaacctcgccaagaggtacatgcagcagcacggcgatgtcgagctctccgcgctcgggatggccattgcaacagttgtaactgttgcggagattcttaagaataacgggtttgctgttgaaaagaagattagaacatctacggtggaaataaacgatgaatcgagagttcgcccgctccaaaaggctaagattgagatagtgttagaaaagagcgagaaatttgatgagctgatggctgccgcagcggaagagagggaagctgcggaagctgaggagcaggcctga</cdnaseq>

Protein Sequence

<aaseq>MAVEEITEGVRNLAVEGEPAAAAAAAGGGGEGAQRRAAGSSSNR IQVSNTKKPLFFYVNLAKRYMQQHGDVELSALGMAIATVVTVAEILKNNGFAVEKKIR TSTVEINDESRVRPLQKAKIEIVLEKSEKFDELMAAAAEEREAAEAEEQA</aaseq>

Gene Sequence

<dnaseqindica>1418..1513#1228..1292#1023..1085#357..405#75..260#gcacaacccaccaccaccaccaccaccgatctgcggagagcgagctaccaccaccgagcggcgtagcttgagcgatggcggtggaggagatcaccgagggggtgaggaacctggccgtggagggggagcccgcggcggcggcggcggcggcgggaggtggtggtgagggggcgcagaggagggcggccgggagcagcagcaaccgcatccaggtgtccaacaccaagaagccactcttcttctatgtcaacctcgccaaggtttgtcactctacccgcctcgcctcctctccgtgccctagccgcgagcagcagcggtttttgttgactgattggattggtttcgtttttatgcagaggtacatgcagcagcacggcgatgtcgagctctccgcgctcgggatgggtgcgtctcgctctcttctccctgttcatccctggtctcgatttggcgttaattcggggggttttagggtaataggagtgactcttgttgagttgattcgacctagaagttattaggttgtgggagaatgcgaacgatgcaagaagttactgtttgcatgtgcaattgctctgttgtttcatgattgacttctggattcccaatctatttttatcaaggtggagcatttttctgtttcgcgtttgtgtgctaggtaatcttagtattgtgttctaggatatgccattttgcgaagcagtgtatagttcaatagttggtcttgaagacttaaacgggtggtctttgtttcgtactcgcattgatatgtacataaccactcataaaatgagtcatgacaccctttcaccactcttcattacctttgcttttggtcaagtaaaactatttactgttcttaaaaaaaaaagaagctgtttataaatgtttaactcttagatgagtgctgactgtcagcccatttggttggtcggtgtagttcgatatttcctttcttcaagatgtggttttatctctactgttgaaggctgtacaaaccatattgtttgatttgtttgcagccattgcaacagttgtaactgttgcggagattcttaagaataacgggtttgctgttgaaaagagtaagaaattctttccttgcaggattgtactgcttgttttgtctcattatctgttttaacattactgttgtgggcatgcagtaatccacaatattcattgttctctactctgaattttccattttcaccttcgcttgtgtagagattagaacatctacggtggaaataaacgatgaatcgagagttcgcccgctccaaaaggctaaggtcaggctttagttgccaaagccacttatttctctcttgttaaaaaaaaaaagcctgttcttaacatgagctttctttctttctttttctaaacctgaactgattgagagctttgtttcctacagattgagatagtgttagaaaagagcgagaaatttgatgagctgatggctgccgcagcggaagagagggaagctgcggaagctgaggagcaggcctgataaggactaggagcgatgacctttgttgtgtgctttgttcctgttgtttaatactgcgtgctttagagatggcatgccttcttgtttaagttgtgtttttcttttatggcagtgtgtgtaaactcagtgactgatgataatctgtttgcaattgagttgagacagcttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0173100, RefSeq:Os01g0173100