Os01g0174300

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Revision as of 04:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0174300| Description = NADH:cytochrome b5 reductase (CBR) family protein| Version = NM_001048698.1 GI:115434809 GeneID:4327126| Length = 43...")
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Gene Name

Os01g0174300

Description

NADH:cytochrome b5 reductase (CBR) family protein

Version

NM_001048698.1 GI:115434809 GeneID:4327126

Length

4336 bp

Definition

Oryza sativa Japonica Group Os01g0174300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3819177..3823512

Sequence Coding Region

3819479..3819535,3819867..3819935,3820127..3820240,3820330..3820419,3820666..3820743
,3820885..3820936,3821021..3821091,3821216..3821270,3821372..3821422
,3821889..3821948,3822367..3822442,3823108..3823150,3823230..3823349

Expression

GEO Profiles:Os01g0174300

Genome Context

<gbrowseImage1> name=NC_008394:3819177..3823512 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3819177..3823512 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgctgctgcttcgtaggctcgccgggacccaccgcggccgcgtgcctctggccgccgccgccgccgtcaccggtggagcggcgctcttctgcgcctcgtctcccccaaccatcgcgctcatggaggagaagggcgaggatgccgctgctaaagttgcgcttaacccagacaagtggctagagttcaagctccaggagaaggcaacagttagccacaattcacaattatttagattttcgtttgacccatctactaagttgggtcttgatgttgcttcatgtctcataacaagggctccaataggagaggaagtggagggaggaagaaaatttgtcattcgcccgtacacacctatctctgatccagattctaaaggatattttgacctgctaatcaaggtttatcctgatgggaaaatgagtcagtatttcgcaagtctgaaaccaggagatgttgttgaggtcaaagggcccattgaaaagctcagatatagcccaaatatgaagaaacaaattggcatgatcgctggtgggactggcataacaccaatgctgcaggttgtcagggctatcctaaaaaaccctgatgacaacactcaggtttccttaatttatgccaatgtgtcaccagatgatatcttgctgaaaagggaattagatagacttgccagtagctatcctaatttcaaggtattctacacggtggacaaaccatcaaatgattggaggggtggtgttggctacatatccaaggacattgccttgaaaggtttgccacggccaggggaggattctctgatccttgtttgtggtcctccaggtatgatgaatcatatatccggtgacaaggcaaaggatagatcgcagggcgagctcaccggcattctgaaagagttaggatacactgcagagatggtatacaagttctga</cdnaseq>

Protein Sequence

<aaseq>MAALLLRRLAGTHRGRVPLAAAAAVTGGAALFCASSPPTIALME EKGEDAAAKVALNPDKWLEFKLQEKATVSHNSQLFRFSFDPSTKLGLDVASCLITRAP IGEEVEGGRKFVIRPYTPISDPDSKGYFDLLIKVYPDGKMSQYFASLKPGDVVEVKGP IEKLRYSPNMKKQIGMIAGGTGITPMLQVVRAILKNPDDNTQVSLIYANVSPDDILLK RELDRLASSYPNFKVFYTVDKPSNDWRGGVGYISKDIALKGLPRPGEDSLILVCGPPG MMNHISGDKAKDRSQGELTGILKELGYTAEMVYKF</aaseq>

Gene Sequence

<dnaseqindica>3978..4034#3578..3646#3273..3386#3094..3183#2770..2847#2577..2628#2422..2492#2243..2297#2091..2141#1565..1624#1071..1146#363..405#164..283#actgcgccgtgggcccacactgtcagcctctctctctctccctctactcccaccatccgggcgaaatcactcgagcttcacacctgtgtcagatctcggaatcactccgccgccgccgccgcggagctcgccgtcgactcctcctcctcctcctcctctcaccatggcggcgctgctgcttcgtaggctcgccgggacccaccgcggccgcgtgcctctggccgccgccgccgccgtcaccggtggagcggcgctcttctgcgcctcgtctcccccaaccatcgtacgaacgaacctcctcaccggctccatttctcctgcagctttgctttctctgtctcactggtgccgaatgattgcaggcgctcatggaggagaagggcgaggatgccgctgctaaagttggtgagactcgatttcttggatgtgtggattaatagaaacagttcttatgtcctcatggactatttttttttatcttgtctgttatgttacggtatttcctgcatcctaccagaggctggggatggctaatgatgcgaacacctgaatgaacagtagtccaaattgttcgtagcataggaatttaaggcgactttctaggaacagaatagtcagccaagttcaaatggaaattttcatatatgttccatttgttatggacaaggccaagtgtaaatgtgttccttcaggcatactactgtcaaatacttaatgcacatcaatatgttatctgattatggattttggcatggtcggataaaaatggtaccgtgtagggtcatgtaggcattctagtggtggttctgtatggttttcatgccataatttggatcctctacattgctgtctcctagatattgttttttaagtggttctgttgcctataatctcatctgatcaccaatgtgttgatgtacaaagttagagaatcctcttcagatcctggctgcagcttgcaaaatttgtgataatctaaattattttcctagcaatttagtctttatacttctttactgttttatttctgcattttcttccaactgacaattctttttcttgcttttcagcgcttaacccagacaagtggctagagttcaagctccaggagaaggcaacagttagccacaattcacaattatttaggtaatattggtaaaattatacatttttggacaacaaattgctgaaatattttttcctgctacgtacactgcaatttgtctttgttgcatgaaaccatagactattctctgctagcatatgtagtatattgctatgtaatgcttctgtattttgactaattgcacccattatcaatttcccgtagttcacgttagtgtctttgttttcctcctcatgttttgtttattgttctcaactttcaaaacagatatatcaatgttcaagatattaaattattcggtgcatcgtattttcccttttggcaagtttgaaattttcaaatcattttattgtcttgagtattaattcgaatcattctatcttgttttgcatgcttctgtcttaattgaaggcttatgcatgtgatttgatcttgcagattttcgtttgacccatctactaagttgggtcttgatgttgcttcatgtctcataacaaggtatccctttactttctggcatatgttagaatacctctactgtgagaatcatttatataaattaaacggaatatttgtttttttttaaagaatgtgtatagatgcagatgctgtgttaataaccttagttgaaacagtgttctagctaattattattgttgtcgctactagcctgtaacaaatattgtgcaaagcaaaataccactttatgttaaatgaataaatagttcatgtttttcccccatgttaaatgttactgtttagcagttagccgtttcagaaaagagagggttttatataccattctgtacatttcagcagcaccttgtttaatattttggccttctatctactcactcttttataggcgtgaatcattttgcatctacttttctgatagtatgagctagtattttttatatttatttcttaccttggagactctaaaaccattaattcatctcagggctccaataggagaggaagtggagggaggaagaaaatttgtcattcgcccgtaagcagagacaaaaacagttatccattattgcatacataacatatgttagtacgactgttcgattagatttttattggaatctaacatgttttctgcaggtacacacctatctctgatccagattctaaaggatattttgacctgctaatcaaggtaacacaaagtttaatgtctgaagttcagaacatgctagttgcttttagatcagcagttcttgtagtccagtgtaaggtagtactgaaaggagagttatttttgtgctatatgtatgttgcaggtttatcctgatgggaaaatgagtcagtatttcgcaagtctgaaaccaggagatgttgttgaggtcaaagggtaatgtgaaatgaaaatccgttgagttttctatgcatgttattggctatctgtaattgatgtctttctcttttttttttccaggcccattgaaaagctcagatatagcccaaatatgaagaaacaaattggcatggtaagacatgacttcaaccttagccaagtgtctatgtttgccaattcaatttagcaagcccaaagctagaaaaattctgaagttatcaagctggtctttttttttaaaaaattttaacaaaatgtatgtatatgctttcagatcgctggtgggactggcataacaccaatgctgcaggttgtcagggctatcctaaaaaaccctgatgacaacactcaggtctgttgccatcacaatttttttgaacttatttgcaccgacttgcacccttgtgacatccctttgagaaactatcattttatgtgaacgatattgctataccacgtaactttgttatgcatgctgacatgacagaacagatcaatgtatccactttcatactgctaccagaaataacattattagctatataatgtttgactaatgttttgttctaatctgatttatggttcttggtatttctaggtttccttaatttatgccaatgtgtcaccagatgatatcttgctgaaaagggaattagatagacttgccagtagctatcctaatttcaaggttggtattactacagggtttaattcattttgatctgattacatgggatttttttgttagtgtaacacgccctggtaatttttctctaggtattctacacggtggacaaaccatcaaatgattggaggggtggtgttggctacatatccaaggacattgccttgaaaggtttgccacggccaggggaggattctctgatccttgtgagtagtctttgtcatttctgcttatagttctgctgatattctttaagcttttgacaagagtttgtacaattttaaagctcgcttataatctccatcaacattatcttcattcatgtgtagcataaacatgattattaatgttggaatgtaagaaagcatcagtcattcaatggtttttgcttggtcaggtttgtggtcctccaggtatgatgaatcatatatccggtgacaaggcaaaggatagatcgcagggcgaggtaatgtgaagtcactatctaccttttgtgattgtagttagtgccatatttcttatccttcttaattggatgaaaacagtagaatgatatctggatgaacatactaagataattcctagctaaaagcgacaattttcgcttgccaagttccagctaacagacctgtcaaagctagccagggagcattccagtgatctaaatatcccagttgtatcctagttcctagatttgcattaaccactacaacatgacattcgttttatcactttattgccctcttttgcttggccatgttaatgttttactgatcatcaatttggttactctgcagctcaccggcattctgaaagagttaggatacactgcagagatggtatacaagttctgagtgcgtcttcaagacgttagaatgctgacatgcttgctgcaatggcgccatggcaatgatcaaataaaccacagctgaacacttcttttattatgccacagcagttgggttccagacttgagaaagttttgacatttctcaataatgttcattgagaatcacatctttttgcgtggtttgcttctgcgatatgttcttgcggcccatgcacctggatatgcattgcttcagccgtttatgagatggtctggaattgccgtggatgatcttatagagatagatccattcacagatttgagact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0174300, RefSeq:Os01g0174300