Os01g0176400

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Revision as of 04:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0176400| Description = Similar to Photoreceptor-interacting protein-like| Version = NM_001048716.1 GI:115434845 GeneID:4326222| Length = 95...")
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Gene Name

Os01g0176400

Description

Similar to Photoreceptor-interacting protein-like

Version

NM_001048716.1 GI:115434845 GeneID:4326222

Length

959 bp

Definition

Oryza sativa Japonica Group Os01g0176400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3937234..3938192

Sequence Coding Region

3937236..3937553,3937646..3937912

Expression

GEO Profiles:Os01g0176400

Genome Context

<gbrowseImage1> name=NC_008394:3937234..3938192 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3937234..3938192 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggtgagcaggcacacgcgagcacgagcaaggaggagaggaagtcgctgtgccggctgatcgacgcgcggaagctgacggcggaggcggcggcgcacgccgtccagaacgaccgcctccccgtgcgctccgtgctgcaggtgctcttctccgagcacggcaagctcaaccgcctcgccgagctcagcggcggtgcctcctccttcggcgcgcccagcccggcgtttgacctccccggcgcccgctgcccctccaagcgcgaggtgctcgcccagcaccacgagctccgccgcctccgcgaggacttcgcccgcctccaggtccagtgcagcgcgctgcaggctcaggtggacaggctgagcacggagaggaggcggcgcggcggaggcggcagcggtggcggcggcgggttcttcaagtggagcacgttctggttcggcggcatgagcgccgacgtcgcgcgggtggaggactccgagagcggcatcgagcggcggacgccggcgagcgggaagaagggcaggggcggcgccgccggcgccgccgccgcgacgccgacgccgaaatggcgcaagtcgatgtcatga</cdnaseq>

Protein Sequence

<aaseq>GEQAHASTSKEERKSLCRLIDARKLTAEAAAHAVQNDRLPVRSV LQVLFSEHGKLNRLAELSGGASSFGAPSPAFDLPGARCPSKREVLAQHHELRRLREDF ARLQVQCSALQAQVDRLSTERRRRGGGGSGGGGGFFKWSTFWFGGMSADVARVEDSES GIERRTPASGKKGRGGAAGAAAATPTPKWRKSMS</aaseq>

Gene Sequence

<dnaseqindica>3..320#413..679#atggtgagcaggcacacgcgagcacgagcaaggaggagaggaagtcgctgtgccggctgatcgacgcgcggaagctgacggcggaggcggcggcgcacgccgtccagaacgaccgcctccccgtgcgctccgtgctgcaggtgctcttctccgagcacggcaagctcaaccgcctcgccgagctcagcggcggtgcctcctccttcggcgcgcccagcccggcgtttgacctccccggcgcccgctgcccctccaagcgcgaggtgctcgcccagcaccacgagctccgccgcctccgcgaggacttcgcccgcctccaggtacggccatctccgccgccgctcgccgccgttcatcgattcgattcaaagctttttgaggtgttcgtcctcgtcttcgtcgcgacgtgcaggtccagtgcagcgcgctgcaggctcaggtggacaggctgagcacggagaggaggcggcgcggcggaggcggcagcggtggcggcggcgggttcttcaagtggagcacgttctggttcggcggcatgagcgccgacgtcgcgcgggtggaggactccgagagcggcatcgagcggcggacgccggcgagcgggaagaagggcaggggcggcgccgccggcgccgccgccgcgacgccgacgccgaaatggcgcaagtcgatgtcatgagaggatctgaaattctgaagccaaagctgatggctaagtgggtcgttaatctgttttactacctttaattacagtcagttacctttctgtctgaactattgtttgtggtgaaaccattcagataaatctgctcacttgagtgcataaataaatctgtgatgttctaaaaagagagggaagcatataagatttctggtttggtcgaggacgaaatggacttaagaatttagtttctcttcataaataaatcaacaaatagttgtacaacgccagtatgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0176400, RefSeq:Os01g0176400