Os01g0178200

From RiceWiki
Revision as of 04:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0178200| Description = Protein of unknown function DUF92, transmembrane family protein| Version = NM_001048725.2 GI:297596208 GeneID:4323868...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0178200

Description

Protein of unknown function DUF92, transmembrane family protein

Version

NM_001048725.2 GI:297596208 GeneID:4323868

Length

1947 bp

Definition

Oryza sativa Japonica Group Os01g0178200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4063068..4065014

Sequence Coding Region

4063068..4063234,4063334..4063447,4063614..4063707,4064195..4064440,4064526..4064774
,4064883..4065014

Expression

GEO Profiles:Os01g0178200

Genome Context

<gbrowseImage1> name=NC_008394:4063068..4065014 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4063068..4065014 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcacggcggcggaggaggcggaggagtttggatccgggcggcggtggcggtggcggcgggcggcgccatcgcggcgcgcgcggtgcggcgcaagtccgtcgactccaccgcggtgttcgtcggcgttccggccatggtggcccacaccgtcgctgggtacaggttcgcggggatgctgctggtgttcttcttcacggcgtcgcggatgacgagggtcggcgagaagaggaagcgcgcgcttgatcccgacttcaaggaaggagggcagcgcaactggtttacattcagagtggaagcttcagattttggttctgattgtagtagagtaggggaatgtggtaaatctctagaaaggcaaaatagctatctggtgcacaccactcttattggcaggaagcaagttttgtcaaacagtggcattgcaagtgtcttggtagttttgatagcacttgtcacaggagggagcgataggtgcttggatacgagagaatctagtcttgtaactgccctcattggtggtgttattggacattatgcttgctgcaatggtgatacatggtcttctgagctcggcattctcagcaaagcggaaccacgaattatcacaacattcaagagagtacggaagggtaccaatggcggggtaaccattgatggacttctcgcagcagcggctgctggattctcgattgggcttacatttgtgctactaggattcttaaccactcagtgttcttctgatgtattctggaggcagctgctggttatacccttagctacagcagctggcctatgtggaagtctgatcgattcgttgctgggcgcaacactccagtacagtgggtactgtagtcttcgtaaaaaggtggttggagtagacggtccgacggtcaccaggatttcaggacggaatatactggacaacaatggtgtcaatgtagtttctgtgttcttgactactctgatcactgcattggcgtgcgtatacatcttctga</cdnaseq>

Protein Sequence

<aaseq>MDHGGGGGGGVWIRAAVAVAAGGAIAARAVRRKSVDSTAVFVGV PAMVAHTVAGYRFAGMLLVFFFTASRMTRVGEKRKRALDPDFKEGGQRNWFTFRVEAS DFGSDCSRVGECGKSLERQNSYLVHTTLIGRKQVLSNSGIASVLVVLIALVTGGSDRC LDTRESSLVTALIGGVIGHYACCNGDTWSSELGILSKAEPRIITTFKRVRKGTNGGVT IDGLLAAAAAGFSIGLTFVLLGFLTTQCSSDVFWRQLLVIPLATAAGLCGSLIDSLLG ATLQYSGYCSLRKKVVGVDGPTVTRISGRNILDNNGVNVVSVFLTTLITALACVYIF</aaseq>

Gene Sequence

<dnaseqindica>1..167#267..380#547..640#1128..1373#1459..1707#1816..1947#atggatcacggcggcggaggaggcggaggagtttggatccgggcggcggtggcggtggcggcgggcggcgccatcgcggcgcgcgcggtgcggcgcaagtccgtcgactccaccgcggtgttcgtcggcgttccggccatggtggcccacaccgtcgctgggtacaggtgaaagggcggctaatttctcttttttttaaaaaaaatattattgataaaaaaatcctgtttctgatgtgatttttttgagacgaatcatcatcgtaggttcgcggggatgctgctggtgttcttcttcacggcgtcgcggatgacgagggtcggcgagaagaggaagcgcgcgcttgatcccgacttcaaggaaggagggcagcgcaactggtgagtaagaagatggtctctgttcttcttcttcttcttcttttcttgttccgatggtgaccaagaaaaatagagaatgatgtgaaatctgaaattaatatcgtagagatcagagaggcctcggacatgtttgagattgcgctgtggcttttggtataattggcaggtttacattcagagtggaagcttcagattttggttctgattgtagtagagtaggggaatgtggtaaatctctagaaaggcaaaatagctatctggtagaacatatatgcgatttatttgtgcaacaagggaattgagggcctcatagtgctgctatatgataaaaagttggggttcgttgagttagatttaagtgattcatgtgatgtttctgtagtgtgtacagctaccatgttcgctggctcggtatagtttaaattgtgaaaaataaaaatgagctcgatttgatgatgaagtatgtagtttgacaacatttgaaactgtttaaactgttcaaattgtccttattaacttgaggtatgcctacttcctttcaagattcaactcggaacgcaatcccatttttcatgaagtttgtcttgttgtattttctcccaaatttatccaagaggcatttttcaaaggaaaaagaatcacctatttaaaagggatccaaagtttaaggactgttgtcaccgttattgagatgaataagatgcctttcagtttcagaaagtacccttctgaatctttctaatgcaggtgcacaccactcttattggcaggaagcaagttttgtcaaacagtggcattgcaagtgtcttggtagttttgatagcacttgtcacaggagggagcgataggtgcttggatacgagagaatctagtcttgtaactgccctcattggtggtgttattggacattatgcttgctgcaatggtgatacatggtcttctgagctcggcattctcagcaaagcggaaccacgaattatcacaacattcaaggtaaacattgcattttcctcttttaccaattagagaaatatcagtacatataatcactgttgcttttgacatggaacttcaccagagagtacggaagggtaccaatggcggggtaaccattgatggacttctcgcagcagcggctgctggattctcgattgggcttacatttgtgctactaggattcttaaccactcagtgttcttctgatgtattctggaggcagctgctggttatacccttagctacagcagctggcctatgtggaagtctgatcgattcgttgctgggcgcaacactccagtacagtgggtactgtagtcttcgtaaaaaggtatggtgctttctgcaattgatgttattagatgtctatataccctagttgcctttgaatcagaagttgattttttctttttattgcttctgaattttgtttatgcaggtggttggagtagacggtccgacggtcaccaggatttcaggacggaatatactggacaacaatggtgtcaatgtagtttctgtgttcttgactactctgatcactgcattggcgtgcgtatacatcttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0178200, RefSeq:Os01g0178200