Os01g0183000

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Revision as of 04:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0183000| Description = Similar to GmCK3p (EC 2.7.1.32) (Fragment)| Version = NM_001048758.2 GI:297596234 GeneID:4325332| Length = 1898 bp| ...")
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Gene Name

Os01g0183000

Description

Similar to GmCK3p (EC 2.7.1.32) (Fragment)

Version

NM_001048758.2 GI:297596234 GeneID:4325332

Length

1898 bp

Definition

Oryza sativa Japonica Group Os01g0183000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4394103..4396000

Sequence Coding Region

4394103..4394513,4394641..4394762,4394862..4395057,4395275..4395392,4395499..4395546
,4395691..4395791,4395893..4396000

Expression

GEO Profiles:Os01g0183000

Genome Context

<gbrowseImage1> name=NC_008394:4394103..4396000 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4394103..4396000 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcgccgtcgacccgccgccgcgggaggccgcggccgccccgcccgccatgaagcggagcgcgagcttcgaccgcgtcccggaggaggcgcgccgcatcctgcaccgcctcgccggggagctctggggcggcgacgtcgaccccgccgcgctcgccgtgtcccagctcaagggcgccatgaccaacgaggtgttccggatcacctggcccggcggcggcggcggcgagggcgagggcgagggcgaccaccgcaaggtgctcgtccgcatctacggccagggcgtcgaggtcttcttcgaccgcgccgacgaggtccgcaccttcgagtgcatgtcccgccacggccagggcccccgcctcctcggccgcttccccaacggccgcatcgaggagttcatcaacgcgaggacgctctccgcggcggatctgcgcgacgcggagatatcctcgctgatcgccaagaagcttcgtgaattccacgatctcgacatgcctggacccaagaacgtgtcactgtggcagaggctgaggaggtggcttgaggaagctcgtggcaggtgctcgcccgaggaggctaggcagttcagtttggagaagctaggtgatgagatcgcaatgctggacattgcattgtcaggggttgatcagagagtaggattttgccacaatgatctgcaatatggcaacattatgatatatgaagaaaccagacaagtgaccttaattgactacgagtatgcgagttttaatcctgtggcatttgacattgctaatcacttctgtgagatgtctgctgattatcattcagccacacctcatgtgctggacttcacaaaataccctggcattgacgaacaacgcagatttgttcaaacgtacctcagctcttcaggtgagaacccatcagatgcggaagttgaacatttacttggcctgattgcaaaatacagtcttgcaagccatatcttctggggtctttggggaataatctcagggcatgtgaacaagaacatcgacttcgagtaccaggagtatgcaaggcagcggttcgatcagtactggaagacaaaagatcaaacgctgggatccaaatccaactag</cdnaseq>

Protein Sequence

<aaseq>MVAVDPPPREAAAAPPAMKRSASFDRVPEEARRILHRLAGELWG GDVDPAALAVSQLKGAMTNEVFRITWPGGGGGEGEGEGDHRKVLVRIYGQGVEVFFDR ADEVRTFECMSRHGQGPRLLGRFPNGRIEEFINARTLSAADLRDAEISSLIAKKLREF HDLDMPGPKNVSLWQRLRRWLEEARGRCSPEEARQFSLEKLGDEIAMLDIALSGVDQR VGFCHNDLQYGNIMIYEETRQVTLIDYEYASFNPVAFDIANHFCEMSADYHSATPHVL DFTKYPGIDEQRRFVQTYLSSSGENPSDAEVEHLLGLIAKYSLASHIFWGLWGIISGH VNKNIDFEYQEYARQRFDQYWKTKDQTLGSKSN</aaseq>

Gene Sequence

<dnaseqindica>1..411#539..660#760..955#1173..1290#1397..1444#1589..1689#1791..1898#atggtcgccgtcgacccgccgccgcgggaggccgcggccgccccgcccgccatgaagcggagcgcgagcttcgaccgcgtcccggaggaggcgcgccgcatcctgcaccgcctcgccggggagctctggggcggcgacgtcgaccccgccgcgctcgccgtgtcccagctcaagggcgccatgaccaacgaggtgttccggatcacctggcccggcggcggcggcggcgagggcgagggcgagggcgaccaccgcaaggtgctcgtccgcatctacggccagggcgtcgaggtcttcttcgaccgcgccgacgaggtccgcaccttcgagtgcatgtcccgccacggccagggcccccgcctcctcggccgcttccccaacggccgcatcgaggagttcatcaacgcgagggtacgcactctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcccccatcactcctctgctcccaatggcaatggctcattctcctcgtgttctgctcagacgctctccgcggcggatctgcgcgacgcggagatatcctcgctgatcgccaagaagcttcgtgaattccacgatctcgacatgcctggacccaagaacgtgtcactgtggcagaggctgaggtacgcatccccttcactatttctttatctccattaatggcgagaaccacgagcaatccccccttccagaggctaatttcactgtgcttcatgaatcaggaggtggcttgaggaagctcgtggcaggtgctcgcccgaggaggctaggcagttcagtttggagaagctaggtgatgagatcgcaatgctggacattgcattgtcaggggttgatcagagagtaggattttgccacaatgatctgcaatatggcaacattatgatatatgaagaaaccagacaagtgaccttaattgtaagcgactcagtatctccttttacaaatgctccgaaatcaggcgaacagctctgatgcttgatttaaacataaatttgcatctgggttgcataattgaactagtatgaagcatatgatgttggtaattcttggaatgggagcaattgcttaggtcatattctgttaatattttgctgtaaataactgctgtcttgggatctcttttatccttcaggactacgagtatgcgagttttaatcctgtggcatttgacattgctaatcacttctgtgagatgtctgctgattatcattcagccacacctcatgtgctggacttcacaaaataccctggtcagtactgatgatagccatatctgttaagttctacctgcgcgcatggctgtgtgcatttcactgagaaaaaaatcggcttgtttgacacctctgcatatttcaggcattgacgaacaacgcagatttgttcaaacgtacctcagctcttcaggtaagcaggatgcaccttggcaccgttggcccgatgaaagaaaagggaaaataatgcactttgggactgaatgaatactgatgctgcattttctgtaatgtgccatgagtgattttaatcttgattgttccttctgtttatcaggtgagaacccatcagatgcggaagttgaacatttacttggcctgattgcaaaatacagtcttgcaagccatatcttctggggtctttggggaataatctcagtaagctctcttaacacagcggccacgccaatggcaaatgtgtatagataatctatttagtgatcttacaaagctggttggtatctgtttcttgtctccaggggcatgtgaacaagaacatcgacttcgagtaccaggagtatgcaaggcagcggttcgatcagtactggaagacaaaagatcaaacgctgggatccaaatccaactag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0183000, RefSeq:Os01g0183000