Os01g0183300

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Revision as of 04:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0183300| Description = Endonuclease/exonuclease/phosphatase domain containing protein| Version = NM_001048760.1 GI:115434933 GeneID:4325335|...")
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Gene Name

Os01g0183300

Description

Endonuclease/exonuclease/phosphatase domain containing protein

Version

NM_001048760.1 GI:115434933 GeneID:4325335

Length

4625 bp

Definition

Oryza sativa Japonica Group Os01g0183300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4401668..4406292

Sequence Coding Region

4401847..4402063,4402860..4403002,4403339..4403447,4403546..4404707,4405558..4405614
,4405754..4405865,4405980..4406015

Expression

GEO Profiles:Os01g0183300

Genome Context

<gbrowseImage1> name=NC_008394:4401668..4406292 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4401668..4406292 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtgcagaagaatcagcggaagccaggagaggcttcttggcccaaggttgtgctgaagaaatggctcaacctcaagagcaaggattcggagttcaacgccgacgaggaagacgacgacgacgggagcgacgttgatgagcaagagaactgcggctgcgacggcggcgaggagcggcggcgggccgacggcgatctcgccgatgagaatgtggagggcggcgcgccgtacaggctgcggcggcgaaactcggagacgctgcgcgcgcagtacatcaacaccaaggagctcaagctctgcgtcggcacctggaacgccgccggcaaggtcccccccggcgacctcgacatcgccgactggctcggcgccggcgccggcgagcccgccgacgtctacgtgctcgggttccaagaagtggtgccgctgaacgccggcaacgtgttcggcgcggaggacgcccggccggcgcaggcgtgggaggagctcatccgcagcgcgctgcggcgggcgcggccgccggcgagtagtcggccccggtacaagtgctacagccaccctccctcgccgtcgcgcggggacgcgacggccgccgccgccgccaccgatgacgacgagctcttccctggcaccgatacggacacggacaccaacaccgatgacgactcgctcttcagctcgccggcggagtccgagcagcagaacgtcgccgccaccccgaggaggctgaccaggctgaaccatttcactgccgccgccgacgccgccgccgccatggacgactccggcgacgagcatcagcagcggacgcttctcaagacactgagcaggtcggacagggtcggcctggcatggccggagcagccgctggacctgctcgccaagcacgccacggcgacggcgagtaccaccatgccatcgtcaagatccttccgaacctacaactcattcaggccgtctcgcgccgccgccgccgccgaccagtcgaacgacgacctcgccatgatcgccgacctcgtcatggacctcgccgcggcgcgcaagaggcgttcgccgtacgtgaggatcgtgagcaagcagatggtgggcgtcttcctgacggtgtgggtgaggcgcgggctgaggaggtgcgtccacaacgtgggggtgtccaccgtcggcgtcggcgccatgggctacatcggcaacaagggcgccgtgtcggtgagcatgtcggtgtaccagaccatgttctgcttcgtgtgcacccacctcgccgccggcgagaagcccgccgacctccacaagcggaacgccgacgtgcaggagatccaccgccggacgcacttcgccggcgtcggcatgccgagaaacatctatgaccatgagaggattttttggttgggtgatctgaattatcgcatcgacgtcgcgtacgagagagcacacgagctgatttcgacgatggattggactcagctggcagagaaagatcagctgaagcgagagctaaggaagggtcgggcgttcgacgggtggacggaaggggtgctggagttcgcgccgacgtacaagtacgagctcaactcggccaagtacatcggcgacgaccagcgcggcggcaggagaacgccggcgtggtgtgataggatactgtcgttcgggaagggggtgaagctgatgagctacgggagggcggagctgacgatgtcggaccaccggccggtggtggcgacgtacgcggcggaggtggaggtgttcagcagcaggaagctgcagagggcgctgacgctcacggacgccgaggtggaggccggcaccgtcgtcgccgtgccggaccacctcgccggtttttga</cdnaseq>

Protein Sequence

<aaseq>MVVQKNQRKPGEASWPKVVLKKWLNLKSKDSEFNADEEDDDDGS DVDEQENCGCDGGEERRRADGDLADENVEGGAPYRLRRRNSETLRAQYINTKELKLCV GTWNAAGKVPPGDLDIADWLGAGAGEPADVYVLGFQEVVPLNAGNVFGAEDARPAQAW EELIRSALRRARPPASSRPRYKCYSHPPSPSRGDATAAAAATDDDELFPGTDTDTDTN TDDDSLFSSPAESEQQNVAATPRRLTRLNHFTAAADAAAAMDDSGDEHQQRTLLKTLS RSDRVGLAWPEQPLDLLAKHATATASTTMPSSRSFRTYNSFRPSRAAAAADQSNDDLA MIADLVMDLAAARKRRSPYVRIVSKQMVGVFLTVWVRRGLRRCVHNVGVSTVGVGAMG YIGNKGAVSVSMSVYQTMFCFVCTHLAAGEKPADLHKRNADVQEIHRRTHFAGVGMPR NIYDHERIFWLGDLNYRIDVAYERAHELISTMDWTQLAEKDQLKRELRKGRAFDGWTE GVLEFAPTYKYELNSAKYIGDDQRGGRRTPAWCDRILSFGKGVKLMSYGRAELTMSDH RPVVATYAAEVEVFSSRKLQRALTLTDAEVEAGTVVAVPDHLAGF</aaseq>

Gene Sequence

<dnaseqindica>4230..4446#3291..3433#2846..2954#1586..2747#679..735#428..539#278..313#gtcctgcctatctatctaacaaacatatcactgctcaactcacgggtgctcgtgcaagaggcccctccattttcaggcacctagctagctcaggccattgaagaacgcatccaagaaaggtgcgagaaagaacaggagcagagactgatcaagattcagtgattcagaattggagagggaaggagagaagattcagagagaaacagaagcagtgtagatttggatttctagtccgttttgtctgaatttttggtgtgtttgaggcacgaggagtaagatggtggtgcagaagaatcagcggaagccaggagaggtaggtgaatgcttggttcagttcagaacaggttgttcttggtgattcatctggcagcttaattaacagggataattttggctaatttggtgaattggttgtgtgtttttgtaggcttcttggcccaaggttgtgctgaagaaatggctcaacctcaagagcaaggattcggagttcaacgccgacgaggaagacgacgacgacgggagcgacgttgatgagcaaggtacatactgtttctgaaaaacaaaaaacctcttctcagatcaaattatccatctgaatttaagtgttcttgaggagaatttagttaccagtcaggagtcacattttttcctccttctgattggttcggtttcaagcagagaactgcggctgcgacggcggcgaggagcggcggcgggccgacggcgatctcgccggtgagtcttatgtctatgtgacggtttgatgacattcccatgtttgcgtgttgctcttatcctaaaaaagatggggaggagaaaagtgcagctttggactgttcagagtcttcagagtgatagtgctgttgtttagtgctttgcaccaagcttccatcaaatcttgtctccaatcacaacaatggcttacctacaattgctcaaagtggcaccttttctttttggattttgggatccattcaactgacagtaccaaagttgggttttgtcccaaaatcttcttggcagtaaaaaaaaggttcaatttctagaagggaaaagaagctactagtacaaactctgtgttgtctggccaatgaaaatgtggaatccaaacaaatcaacattttgtactccaaaaaataacattaggaaactgaattaaaaaattatttttgagaaaatgttacattccaccattgctcttttttttaaagaaaaacttccattgcagaattggcgtttttttcaagctcaaggctcttttgaaacgcatggattttacagaatagaatataaatccttcaaaatgttgtgaggtctttatcttgtttggtttttattagtttgtatctgattttggttttgttactttggttacatactcactgtgcgagtttatttttgtgtgaaccttataataattggttgtaactcattgagtaaagacccgaatgttttattccatgattaaaaaattaatccttcaaaaatccctcaatttcaaaggaggtctcaaacaaaaataaggagaaaaaaaaagttgtacagagttgctcatcacaccctaaccatttgtaaaaatgcccagatgagaatgtggagggcggcgcgccgtacaggctgcggcggcgaaactcggagacgctgcgcgcgcagtacatcaacaccaaggagctcaagctctgcgtcggcacctggaacgccgccggcaaggtcccccccggcgacctcgacatcgccgactggctcggcgccggcgccggcgagcccgccgacgtctacgtgctcgggttccaagaagtggtgccgctgaacgccggcaacgtgttcggcgcggaggacgcccggccggcgcaggcgtgggaggagctcatccgcagcgcgctgcggcgggcgcggccgccggcgagtagtcggccccggtacaagtgctacagccaccctccctcgccgtcgcgcggggacgcgacggccgccgccgccgccaccgatgacgacgagctcttccctggcaccgatacggacacggacaccaacaccgatgacgactcgctcttcagctcgccggcggagtccgagcagcagaacgtcgccgccaccccgaggaggctgaccaggctgaaccatttcactgccgccgccgacgccgccgccgccatggacgactccggcgacgagcatcagcagcggacgcttctcaagacactgagcaggtcggacagggtcggcctggcatggccggagcagccgctggacctgctcgccaagcacgccacggcgacggcgagtaccaccatgccatcgtcaagatccttccgaacctacaactcattcaggccgtctcgcgccgccgccgccgccgaccagtcgaacgacgacctcgccatgatcgccgacctcgtcatggacctcgccgcggcgcgcaagaggcgttcgccgtacgtgaggatcgtgagcaagcagatggtgggcgtcttcctgacggtgtgggtgaggcgcgggctgaggaggtgcgtccacaacgtgggggtgtccaccgtcggcgtcggcgccatgggctacatcggcaacaagggcgccgtgtcggtgagcatgtcggtgtaccagaccatgttctgcttcgtgtgcacccacctcgccgccggcgagaagcccgccgacctccacaagcggaacgccgacgtgcaggagatccaccgccggacgcacttcgccggcgtcggcatgccgagaaacatctatgaccatgagtaagaagctactaatccgcatttttttaaaaaaagattcaaagtgcatccaaatcatatctgatctgaatttgaatgtcaattgtgattttctgcaggaggattttttggttgggtgatctgaattatcgcatcgacgtcgcgtacgagagagcacacgagctgatttcgacgatggattggactcagctggcagagaaagatcaggtacacatctgaagaacaagaataattagcatgagagcctcatcgtttgccctatatagaatcgtctgttacaacaaaaagttcaattctaaaacttaattttaaagttgattataaaatattttaaatagtttcttctagcattgggttttaagtgactaattctacatgtataaaagttttatctataaattttgttttcgtcgctaataaaccattttagcttataattagctcatagtcaatcgatcgggccctaaagtttctgtgtggcacatctgaatcttgctgtttgatctgaatctctctgattattatgtctgaataataaatcagctgaagcgagagctaaggaagggtcgggcgttcgacgggtggacggaaggggtgctggagttcgcgccgacgtacaagtacgagctcaactcggccaagtacatcggcgacgaccagcgcggcggcaggagaacgccggcgtggtacgttcgtgcagctgctcactgcaaaatgcacgtcactctatttcatattataagtcgttttaacattttcttaagttaatttttttaagggagaatagctaatatggtccttaaagtttcgctcctggatcattttagtccttaatattttatattgtccaaacaagtcctttaaatttatcatgtggactgatatagtccttggtcccaccaaaatcgccacatggacatgccatgtcatcattcatgcaaaatctatatgatttgtccaatttacccttacgcataggaaaataaaaaacaaaaggaaaaagttaaaaaaaaatacatggtatatgtaagagcaaaaatatacctcaaaagggtgaaaaaaaagagtatttttttcctatggctatgtctaattcacccttatatttatttttctattatatacgtaagggtaaattggacaattcgtcatagattttgcatgaatgatgacatggcatatccatatgatgattttggtggacccaaggagtattctatgccttatgataaaatttaaggatttctttggaccatttaaaaggttagggactaaactgattctacagagaaactttagggactaaagtagctattctccctttttttaagtttgattaaaatgataaaaaaacatagcagcattttacaattttcttttgctcaaattcgcacattttgcgtgtgtaatgctgcgatgagagtgcgattttctgtttgtttgtttgtttatgaattttggatgatgtgtatgatcgatcaggtgtgataggatactgtcgttcgggaagggggtgaagctgatgagctacgggagggcggagctgacgatgtcggaccaccggccggtggtggcgacgtacgcggcggaggtggaggtgttcagcagcaggaagctgcagagggcgctgacgctcacggacgccgaggtggaggccggcaccgtcgtcgccgtgccggaccacctcgccggtttttgagggcgagagaggatcggtttctgcaaggataacttgtagttgtagcgctccatgtgtaaacactgtaatcggctaatcgcccatggccgtgaaggattctcttctttctcaagctcacaatccactggtgcatttgccattttgcttcatactgagtaaacccggagaaacgttcgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0183300, RefSeq:Os01g0183300