Os01g0184000

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Revision as of 04:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0184000| Description = NUC156 family protein| Version = NM_001048765.1 GI:115434943 GeneID:4325340| Length = 3635 bp| Definition = Oryza s...")
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Gene Name

Os01g0184000

Description

NUC156 family protein

Version

NM_001048765.1 GI:115434943 GeneID:4325340

Length

3635 bp

Definition

Oryza sativa Japonica Group Os01g0184000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4443750..4447384

Sequence Coding Region

4443768..4443949,4444053..4444150,4444275..4444308,4444629..4444780,4444871..4445051
,4445707..4445887,4446034..4446142,4446324..4446451,4446758..4446832

Expression

GEO Profiles:Os01g0184000

Genome Context

<gbrowseImage1> name=NC_008394:4443750..4447384 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4443750..4447384 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggagcctcgccgtcggcgcgcgccgaggtggtcgtcccgccggaatgggcggcggctaccgccaccgccgccgccgcctcctccgagcccgcgccaccggtcgtcgtcgtctgcgggcccaagaacgccggcaagtccaccttctcccgcctcctcctcaactcgctgctccccaggtatgggagggtggggtatctggacacggatgtcgggcagccggagttctcgccgccgggatgcctctcgttccacgtcgtcgacgaagctctcacagatttgctcaacccaactctgcgtgagtgtgaaaggtgttgcttcttcggtgatatttcttcaaagcgagatccagaaacatatctgaattgtctatttcatttgtatgactattttgttgaaaaatatcgatctggtgccagtgaacctctacctttaattgtcaacactcctggatgggtgaaaggtgctggttttgatatgctggtagagatgctaaggtatatctgccccacaattgttgttcagatacgcatctctgcgcagagcaagaatctccctgatggaatgttttggttagattgtgggcaaacaggaccaaacatgatcaatattgatgctccatttcatgatgctttgaatagatcgttgttaatccagaaagattcttatggaatgcgtgagcgccggcttatagagtacttcaagcaatgttttccaagtgacatatcactgacaacaaataaggagcttgcctatggcctaacttcacttccaccctatgaagtatcaatttcagatgttatggttatacatcttcattgccaggtacctcctagtgaggtatggcatagtctaaatgctaccatagttggtttggccattagctgtggcacgatcgaggcaggccgttcaatcccttggtgtgctggtcttggtattatcagaggcatcgatgtgcaaagaggcattttatatgtaataactcctgttcctctagagcatcttcaaagagttgatctcttgcttcagggactcattgagatcccaaagtctcttctgcaggtccgaggatgcgtctcaccatacatgccaacgaatgtgctgcacaggatttcggagagggacataaacacctga</cdnaseq>

Protein Sequence

<aaseq>MAGASPSARAEVVVPPEWAAATATAAAASSEPAPPVVVVCGPKN AGKSTFSRLLLNSLLPRYGRVGYLDTDVGQPEFSPPGCLSFHVVDEALTDLLNPTLRE CERCCFFGDISSKRDPETYLNCLFHLYDYFVEKYRSGASEPLPLIVNTPGWVKGAGFD MLVEMLRYICPTIVVQIRISAQSKNLPDGMFWLDCGQTGPNMINIDAPFHDALNRSLL IQKDSYGMRERRLIEYFKQCFPSDISLTTNKELAYGLTSLPPYEVSISDVMVIHLHCQ VPPSEVWHSLNATIVGLAISCGTIEAGRSIPWCAGLGIIRGIDVQRGILYVITPVPLE HLQRVDLLLQGLIEIPKSLLQVRGCVSPYMPTNVLHRISERDINT</aaseq>

Gene Sequence

<dnaseqindica>19..200#304..401#526..559#880..1031#1122..1302#1958..2138#2285..2393#2575..2702#3009..3083#gctcgcgagagaggagccatggctggagcctcgccgtcggcgcgcgccgaggtggtcgtcccgccggaatgggcggcggctaccgccaccgccgccgccgcctcctccgagcccgcgccaccggtcgtcgtcgtctgcgggcccaagaacgccggcaagtccaccttctcccgcctcctcctcaactcgctgctccccaggtaaaaaccccactctaccccccaaagccctagctctgcttcgtcggcgaggagctttgttcgctgacttggagtggtgctccgctccggtgagtgtttgtaggtatgggagggtggggtatctggacacggatgtcgggcagccggagttctcgccgccgggatgcctctcgttccacgtcgtcgacgaagctctcacaggtgacgagatgagatggcatctgtgtgcggggatttgagtgttaaactggagatgtttctcttgagtgattggttaattgggtggtttgagtttctcacagacgtgttgttggcttttgtgcagatttgctcaacccaactctgcgtgagtgtgaaaggtgcgtgattttcccccttttgtgactgtatgaattgcgaagtttgctgttccttgcggagtggtcataccgcttgattgcttcggtttagtaatcttcccttattgtgttcttgttttgagccgaacaacattattattcctattcaatgctgcaataagttcaagaagttacttagtgaaaccatttgctattttccttgctaggcagttttttagactgtggatgtaaagttcttccttgggtatttcgaaactattatgttcagacaactttttacctaacgccagtgtttcttttctttaaaaaaaatccaccaggtgttgcttcttcggtgatatttcttcaaagcgagatccagaaacatatctgaattgtctatttcatttgtatgactattttgttgaaaaatatcgatctggtgccagtgaacctctacctttaattgtcaacactcctggatgggtgaaaggtatatattatgaattggtcttttatgacaggatgccacacgtttttttttagtttgttcactaggccctcctttatttgttttacataggtgctggttttgatatgctggtagagatgctaaggtatatctgccccacaattgttgttcagatacgcatctctgcgcagagcaagaatctccctgatggaatgttttggttagattgtgggcaaacaggaccaaacatgatcaatattgatgctccatttcatgatgctttgaatagatcgtgagtaacatttcatttgtctcagtttgaagttcaagttgatgtcaaaagatatttccaatcgattagttgaagcacagtgaaatagcctccttaatactttgatgaatatttttatccattgtatgcttgtaggttagagcataaactgtgtgtcttgtatgacttgattgctactgaaacttgaatttgcaaacagtaatgaaattatcatccaaagcattcaggaatctacgagttctcttctgtgtggaatggggaaaaatagtaccacaattagcgcctcttttctgcctattaatctcttctccatgcaataagagattagggatccatctacctgaattgataatgaaagaatgcttcaagttctttttgttaaaatgtgcatacgttggtaattatgatagtgcatttcaaatcatctgaagctattaactaaattatatgctatttgcttggtgcaaaaatagcaatgaacgttcttttcctgcagtgctctaatttcacactactctgatgtacccgtttcaagtaccacacctgctgcaattgtcgaattaatacttgcagtcatgtattctacacatagtagcagcaactgctttaatgcatggcaattggcaagtactaatgttgtttatgtatttactaggttgttaatccagaaagattcttatggaatgcgtgagcgccggcttatagagtacttcaagcaatgttttccaagtgacatatcactgacaacaaataaggagcttgcctatggcctaacttcacttccaccctatgaagtatcaatttcagatgttatggttatacatcttcattgccaggtcttttggctccacaattcttttttttttctttcgaattataagctgaggttggaattatgtatgtgagatctcaaatctaggtctttgtatgccctgaatggtaacaagaatccactcacgcttattattttgtccctgttcaggtacctcctagtgaggtatggcatagtctaaatgctaccatagttggtttggccattagctgtggcacgatcgaggcaggccgttcaatcccttggtgtgctggtcttggtacttcctcgctcttctcacatgcatattctcattactatgcatattctatgatttttcagcaacctagtcatgtttcattacacccatgatcaattagtgtagatattgcaaattattacgacaatggcatccagcccttatattgaacttggtcacttgtctgaactttcttatccaggtattatcagaggcatcgatgtgcaaagaggcattttatatgtaataactcctgttcctctagagcatcttcaaagagttgatctcttgcttcagggactcattgagatcccaaagtctcttctgcaggtgacatttccgttttcttccatgtcccctgcttggtttaacgagtgtagaatccatccgtagtatccatgcacagagattcagtaggacaacccttggttccaatatataagcttgtccagatgcatagccagaaatgcttacattttggaatggagtacatgtgtagtcgcatttggaaatgttgcttgatactcaattttctccttggccctaactttgttctgctgcatctgaaacgcctcatgtttgtaacgagagagaagcaaatttgcttccccattactaattaatttgcctgcgcaggtccgaggatgcgtctcaccatacatgccaacgaatgtgctgcacaggatttcggagagggacataaacacctgagttgacgtcgaacgcccttctcctttgccaccaccgttcggggagatgatcctgaacctgttcagaacagagcagagcagttctgacccacagatggagacttgtaacctgtgcagtactgccatgcttgtttgtagcccttgctggtggaaacgatgatatatcattatctgcaattcgttggagacatcggaaaatcaaaattttgaccttttcttgtcctctgcaaaaattgaccgtcaaaatttagtaatgtcaaatattggcgcatgttagattaccaaaatttcgtagtgttggaatgtgtaggtgtagccttatcaaatgttcacatagggttgggttggtttgagatctaaattgaccttttcaatttttggcaatgccaaaatttagcaagttgtggcatgactaattttgggaaggcaatgttgtgtttggattgaagttaaaataagttaactattgaaatggcctaagaaaaggcctattttcttaggcatgttaagatttggcttcaaactaaatagacaataaatactattgaaattg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0184000, RefSeq:Os01g0184000