Os01g0185900

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Revision as of 04:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0185900| Description = Similar to WRKY 1 (Fragment)| Version = NM_001048777.1 GI:115434967 GeneID:4325657| Length = 1956 bp| Definition = ...")
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Gene Name

Os01g0185900

Description

Similar to WRKY 1 (Fragment)

Version

NM_001048777.1 GI:115434967 GeneID:4325657

Length

1956 bp

Definition

Oryza sativa Japonica Group Os01g0185900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4565422..4567377

Sequence Coding Region

4565422..4565481,4565597..4565671,4565760..4566332,4566438..4566551,4566676..4567377

Expression

GEO Profiles:Os01g0185900

Genome Context

<gbrowseImage1> name=NC_008394:4565422..4567377 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4565422..4567377 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgtcgtcgtcgagagcccgccggtgagggacgagaagaaagtcgacgtcgccgcgattggaggcgcgcctccaatagtctttgagagttttgcaccatcgacgcagagagattcaaccatcatcaagaaggaggagaagatggaggcagcgaaggcggagatgggcgaggtgagggaggagaacgagcggctcaagacgatgctcacacgcatcgtcagcgactacaagtcgctgcacacgcacttcctcgacgtcgtcaaggtcaaggagcaaacggcggcggagctctccggagacgacgacgacgacgagcccgacgacctcgtctccctgagcctctgcacgaggcccaacgccgccgcgacgcgccggaagggccacgagaggacgccgtcgtccggcggcggcggcgacgacgggcggctgtccctcgggctgagctgcgctcgcggcggcgttgcctccgacgacgacgacgacaagcaggcgagccgccgcgcgttgccgccgatgcccgtgctgaacctcagctccgacagcagcggggacgccgccggcgccggcgccggcgagcctacccagccgaacaaagcgtccaggagctcgagcggcggcggcgatggcgccgacgacgaggtgctgcagcagcagcaggccaagaaggctagggtttccgtcagagtcaagtgcgacacccccacgatgaacgatgggtgtcagtggcggaaatacgggcagaaaatctcaaaggggaacccttgcccgcgcgcctattaccgttgcaccgttgcacccaactgccctgtacgcaagcaggtgcagagatgcgcggacgacatgtcgatcctgatcacgacgtacgagggcacgcacagccacccgctgccgccggcggcggcggcgatggcgtccacaacgtcggccgcggcggcgatgctgacgtctggctcgaccaactccacgatgcacggcagcggcggcgttcaccaccacctgccgttcgcctcggccgtcggcggcggcggcggcgtcgggctgctcggcccgaccaccatctccaccgccacgtcctgccccaccgtcacgctcgacctcaccgcgccgcactcgctcctgcacccgtcgtcggcgtcgccctacgccgccgccgccgcggggtacgagtccagcagggcgctgccggcggcgtggagcagcgggtacctggcgtacggcggcgcggcggcggcgcagccatactacgccaagggcgttgcgccgtcgccgttcggccatcatttcggcatgatgggcatggcggcggcggcggcgaggccggcgccggagcagctgttcggcggccagacgacgtcgccgtacctgcagagagccatcggcggcggcggcgtcgcgccggcggccgtgacggacacgatcgcgaaggcgatcacgtcggacccgagcttccagtcggttttggcggcggcgatcacgtcctacatggggcgcggcggcggcgcggcggcgccgaacaagtga</cdnaseq>

Protein Sequence

<aaseq>MDVVVESPPVRDEKKVDVAAIGGAPPIVFESFAPSTQRDSTIIK KEEKMEAAKAEMGEVREENERLKTMLTRIVSDYKSLHTHFLDVVKVKEQTAAELSGDD DDDEPDDLVSLSLCTRPNAAATRRKGHERTPSSGGGGDDGRLSLGLSCARGGVASDDD DDKQASRRALPPMPVLNLSSDSSGDAAGAGAGEPTQPNKASRSSSGGGDGADDEVLQQ QQAKKARVSVRVKCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPNCPVRKQVQ RCADDMSILITTYEGTHSHPLPPAAAAMASTTSAAAAMLTSGSTNSTMHGSGGVHHHL PFASAVGGGGGVGLLGPTTISTATSCPTVTLDLTAPHSLLHPSSASPYAAAAAGYESS RALPAAWSSGYLAYGGAAAAQPYYAKGVAPSPFGHHFGMMGMAAAAARPAPEQLFGGQ TTSPYLQRAIGGGGVAPAAVTDTIAKAITSDPSFQSVLAAAITSYMGRGGGAAAPNK</aaseq>

Gene Sequence

<dnaseqindica>1..60#176..250#339..911#1017..1130#1255..1956#atggacgtcgtcgtcgagagcccgccggtgagggacgagaagaaagtcgacgtcgccgcggtatgataacataaattggatttaattacgatcttttttttgagacgtgatgatgctaattgcagagttcttgaacaagatcaaactgaattcgattaattgtatttgggtgcagattggaggcgcgcctccaatagtctttgagagttttgcaccatcgacgcagagagattcaaccatcatcaagaaggtatccatccatcgatcgatcaatcgatcgtaatttgttctgataattcagaaattggtgattaattatgtggtaattattgtgacaggaggagaagatggaggcagcgaaggcggagatgggcgaggtgagggaggagaacgagcggctcaagacgatgctcacacgcatcgtcagcgactacaagtcgctgcacacgcacttcctcgacgtcgtcaaggtcaaggagcaaacggcggcggagctctccggagacgacgacgacgacgagcccgacgacctcgtctccctgagcctctgcacgaggcccaacgccgccgcgacgcgccggaagggccacgagaggacgccgtcgtccggcggcggcggcgacgacgggcggctgtccctcgggctgagctgcgctcgcggcggcgttgcctccgacgacgacgacgacaagcaggcgagccgccgcgcgttgccgccgatgcccgtgctgaacctcagctccgacagcagcggggacgccgccggcgccggcgccggcgagcctacccagccgaacaaagcgtccaggagctcgagcggcggcggcgatggcgccgacgacgaggtgctgcagcagcagcaggccaagaaggctagggtttccgtcagagtcaagtgcgacacccccacggtactaattaattacagaagaacgattactcttcttaatcccaatctctaaaccataataattacgtaatttacccgtgctaatcacgctgttaattatgattagatgaacgatgggtgtcagtggcggaaatacgggcagaaaatctcaaaggggaacccttgcccgcgcgcctattaccgttgcaccgttgcacccaactgccctgtacgcaagcaggtacgtatatacgcgtataaatacgtatttacgtttacaaatacgtatatgattcgaatgatgcgtacttaaattgaagcgaaaatttaaatttgtgttggttttgtgttaatcgatggatcaggtgcagagatgcgcggacgacatgtcgatcctgatcacgacgtacgagggcacgcacagccacccgctgccgccggcggcggcggcgatggcgtccacaacgtcggccgcggcggcgatgctgacgtctggctcgaccaactccacgatgcacggcagcggcggcgttcaccaccacctgccgttcgcctcggccgtcggcggcggcggcggcgtcgggctgctcggcccgaccaccatctccaccgccacgtcctgccccaccgtcacgctcgacctcaccgcgccgcactcgctcctgcacccgtcgtcggcgtcgccctacgccgccgccgccgcggggtacgagtccagcagggcgctgccggcggcgtggagcagcgggtacctggcgtacggcggcgcggcggcggcgcagccatactacgccaagggcgttgcgccgtcgccgttcggccatcatttcggcatgatgggcatggcggcggcggcggcgaggccggcgccggagcagctgttcggcggccagacgacgtcgccgtacctgcagagagccatcggcggcggcggcgtcgcgccggcggccgtgacggacacgatcgcgaaggcgatcacgtcggacccgagcttccagtcggttttggcggcggcgatcacgtcctacatggggcgcggcggcggcgcggcggcgccgaacaagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0185900, RefSeq:Os01g0185900