Os01g0188200

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Revision as of 04:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0188200| Description = Conserved hypothetical protein| Version = NM_001048791.1 GI:115434995 GeneID:4326768| Length = 3590 bp| Definition ...")
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Gene Name

Os01g0188200

Description

Conserved hypothetical protein

Version

NM_001048791.1 GI:115434995 GeneID:4326768

Length

3590 bp

Definition

Oryza sativa Japonica Group Os01g0188200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4733017..4736606

Sequence Coding Region

4733017..4733767,4733845..4733919

Expression

GEO Profiles:Os01g0188200

Genome Context

<gbrowseImage1> name=NC_008394:4733017..4736606 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4733017..4736606 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcaatacttgtgagctatctaagcttgttctggctgctgaaagttctttgcattcttcttcctgggagatgcaaggaaggttcatcattgacatacaatgggtgtcaagggattaccagcaacttcctgtcaacagttgaaaatgcggaggacaaattcgtgcataagattgtaacatcaatggtaaatcataatatatccctggtcaatcaaataataagcactggaaacaaggaaacaataaggaaacatacctatatgtcctctgaattcaagatgtacagatctatgttaagcagtatgctaaaacttcttgtgtgctacccttctgctgctgctgttgctcttgataaactaagatgcctgataaaagaactagcccgactagatgacagtgattgctccgaagtttctgttgccaatgttgaatcatttcaaacaaattctgcccgtgaagtacttgacacttcaaatgatattgtcaagccagtatctgctagtatgaaggcttctcacatgggaacagattttgataagttaaaattcgaccccgctgaatttagtagcaagaaggaagtatctatagtgcataatataattctttggacactcaagtttgcaaattcttgtcataatatgctttctaaaacacctagtgctagctgcaatctttatgatagcatcaaggagctgattgagtgtgtgcagcagaatacttctctgtattgtagcacatacgaatctttccatctggtaatgtgtgcttgtatttcatggtatgcttgtaaaactcgagatgtcaatcaagaatcaggggattcaaaag</cdnaseq>

Protein Sequence

<aaseq>SILVSYLSLFWLLKVLCILLPGRCKEGSSLTYNGCQGITSNFLS TVENAEDKFVHKIVTSMVNHNISLVNQIISTGNKETIRKHTYMSSEFKMYRSMLSSML KLLVCYPSAAAVALDKLRCLIKELARLDDSDCSEVSVANVESFQTNSAREVLDTSNDI VKPVSASMKASHMGTDFDKLKFDPAEFSSKKEVSIVHNIILWTLKFANSCHNMLSKTP SASCNLYDSIKELIECVQQNTSLYCSTYESFHLVMCACISWYACKTRDVNQESGDSK</aaseq>

Gene Sequence

<dnaseqindica>2840..3590#2688..2762#aaacacaagggcctctccacaaaaagaggtttccgccgccatcgtcggcgtcggcgtcggcggcgatggacaagttaccggcggcgtcgtccgccatgcaatggagcatcgacctcgacagggctctccgctcccgccaccccggtgagtagagtaaacccccctccatccatggaggcttcaccctcacctcactctctctctctctcaaatctcaaataatcaatctccctgcagccacgcgcctccgcgccgtcgacgccgtcgccccgcgtctccgggagctcggagcctcgccgccggccgccgtcccccccgcggtcgcctccgccttgggcgtcctcccctccgaaccgcgcctcttcgcccacaccatcctcctccgcctcgccacccacttcgccaccgccgacaacgccgtccgggcccgcatcctccgcgccctcctcctcctcggcctcgacggctcgctgcccatgaccatggcatgcgtggcggcggaaccccaacatcaggtggcggtgctcgcgagggtcaaggccgcctacgacgctggctgcccgcgggccagggctctcgcgctgcggatgttcggatgcctcgcccacctcgcccaccacagcctccacctccgctctctcatcctctccaccttctcttcctccaatgcgctacaggttgtaataacctcaataatccatctaatttggcttgggatttctcaactcacctaattattatggtattatggttatcatctggcaggtcaaagcggctttgtttgcagctgcctgtttttctaggctatcagtggatttctcatacattacacttgaatcacttcgaagattaatttcttcaccaacatcacaacctcaaattatcatggcagcgattaagattttccccaagcttgactgtacgttggctgttatccatagagttcatgaggtgttcatggatatacgtgtttcttgcttaacttcgttttttaatctttttttatttactcttaagttgcccaacatttacattgctttctcactcttacggattcattgctttaacaatactccatatgcctaccaatcatgtgcacatactccaaggaatcatcaaggaaagaaaatttaaaactacacattgctctgatttacaacaatagtaatctagtccttgaacacctaagttgttagttattactccctccattccaaattgatcatcatataatttttttgaaaatattcctaaatgatcatcgtatttgtgttcattcattaagtctattcgttatttgtgcattggggtaaatgagcattgattcatgcatccatacacacaagtgttttgatttgctattggctagaaaatagtggggattgtgcatgcatcaagtttattgctaaagtaaatgtagcatgagagagttattatattttcttggtcttggtgcactcatgtaatatgatgatcaattaggaatggagggagtacaaatgtaagttagtttttgcattacgggttaatgtgaagaccaaagctctgaaaacatccaatgaaaaaataagtctatgaaataggtaaatatgtgatgatagtctcgatgctatctgtcgactttatcttgtgaaattggacctaccaataaaactggctagttttctgaaatggagtagtagaacataaaagactaatgatatattttgctttatacaccaatcttaggtgggatctctgattttttttcttgcagttgttttcatcacattttaaagaagcattttcactcttgatgtcacaggttggaaagcagatcgttctgggcacgttggaagataatttcaaagctgacatgctcttgtcactttcaagattggcatccaaatcagttgttctgttttgcaatcaggtagtgtaatccactagttggtagcatatgtatttgacttaatttgttctaactcatcgctgcaattatgttctgtgttacatcatttagttcactttgcaataatcatatgcatgtgttttctgtttatagaagtaaatatactctctttctttcgaatgcttggcactttataacctgattcgtgttttctcaaacatctgaagatgctattaatcgcatcccatttccttgtgtcatttcctgtgattggcatgctactaaaggacaccttagtcacattttaaaattagagatgacaatcaagaatcaggtgattcaaatttcttttagaattactagctatgtatttttaccctcttgctgagaagctgggggcattaataccaatgctctctgtttcctttgtgaattgacttaaaagtaaactttatttcgatttttctatttcaggtggaattgctgttattgttcctggagcatgaatcttctcattgcatgaagactgtgtcattgaaatgtttatgtttcatgtttcacggaagcatctgccattttcctgttttaaagactgtttttgggacgttattacagctaattgatgatgatgatttcccacttgattgtaagagagatgcatttatggttcttcaaaaggtgaacactaaggtcttactgttcgtgctgtctagacatctctttttcctcattatatctgattgatttataaaaacttttcagatagtctgtggcaaagctccaattgttcatttagtcaatacttgtgagctatctaagcttgttctggctgctgaaagttctttgcattcttcttcctgggagatgcaaggtactgctcttaaagttattgctggcaccttatgttttcttcagcaaacaaggtcacatcagaacatgattactcaggaaggttcatcattgacatacaatgggtgtcaagggattaccagcaacttcctgtcaacagttgaaaatgcggaggacaaattcgtgcataagattgtaacatcaatggtaaatcataatatatccctggtcaatcaaataataagcactggaaacaaggaaacaataaggaaacatacctatatgtcctctgaattcaagatgtacagatctatgttaagcagtatgctaaaacttcttgtgtgctacccttctgctgctgctgttgctcttgataaactaagatgcctgataaaagaactagcccgactagatgacagtgattgctccgaagtttctgttgccaatgttgaatcatttcaaacaaattctgcccgtgaagtacttgacacttcaaatgatattgtcaagccagtatctgctagtatgaaggcttctcacatgggaacagattttgataagttaaaattcgaccccgctgaatttagtagcaagaaggaagtatctatagtgcataatataattctttggacactcaagtttgcaaattcttgtcataatatgctttctaaaacacctagtgctagctgcaatctttatgatagcatcaaggagctgattgagtgtgtgcagcagaatacttctctgtattgtagcacatacgaatctttccatctggtaatgtgtgcttgtatttcatggtatgcttgtaaaactcgagatgtcaatcaagaatcaggggattcaaaag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0188200, RefSeq:Os01g0188200