Os01g0192900

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0192900| Description = 1-aminocyclopropane-1-carboxylate synthase family protein| Version = NM_001048814.2 GI:297596265 GeneID:4327307| Len...")
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Gene Name

Os01g0192900

Description

1-aminocyclopropane-1-carboxylate synthase family protein

Version

NM_001048814.2 GI:297596265 GeneID:4327307

Length

1997 bp

Definition

Oryza sativa Japonica Group Os01g0192900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5001249..5003245

Sequence Coding Region

5001495..5002392,5002493..5002653,5002779..5003105

Expression

GEO Profiles:Os01g0192900

Genome Context

<gbrowseImage1> name=NC_008394:5001249..5003245 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5001249..5003245 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggcaagctgttgcctgctgcggcgttcgccgggtcggcgccgccgctgtcgcaggtggcaacgtcggcggcgcacggcgaggactcgccgtacttcgccgggtggaaggcctacgacgaggacccctaccacgccgtcgataaccccgacggcgtcatacagatgggcctcgccgagaaccaggtctccttcgacctcctcgaggcctacctccgtgaccacccggaggccgccggctggagcaccggcggcgccggcgccggtagcttcagggacaacgcgctgttccaggattaccatggcctcaagagcttcaggaaggcgatggcgagcttcatggggaagatacgcggcggcaaggcgaggtttgaccccgaccacatcgtgctcaccgccggcgccaccgccgccaacgagctcctcaccttcatcctcgccaaccccggcgacgccctgctcatccctaccccttactaccccgggtttgacagggacttgaggtggaggacgggggtgaacatcgtgccggtgcggtgcgacagcgcgaacgggttccaggtcacggtcgccgcgctccaggcggcgtacgacgaggccgccgcggtggggatgcgcgcccgcgccgtcctgatcaccaacccctccaacccgctcggcaccacggtcaggcgcaagatgctcgacgacatcctcgacttcgtgtcgcgcaacgacatccacctcatctccgacgagatctactccggctccgtcttcgccgcgccggacctcgtcagcgtggcggagctcgtcgaggcgcgcggcggcgacggcatcgccggccgcgtccacatcgtctacagcctctccaaggacctgggcctcccggggttccgcgtcggcgtggtctactcctacaacgacgccgtcgtgacggcggcgcggcggatgtcgagcttcacgctggtgtcgtcgcagacgcagaagacgctggcggcgatgctgtccgacgaggcgttcgccggggagtacatccgcaccaaccgccgccggctccgggagcggcacgagcacgtggtggccgggctggcgcgcgccggcgtgccgtgcctgcgcggcaatgctgggctgttcgtgtggatggacatgcggcggctgctgctcggcggcggcggcgtcggcggcgagctgaggctgtgggagaagctgctgcgccaggcgaagctgaacatctcgccggggtcgtcgtgccattgctcggaggccggctggttcagggtgtgcttcgccaacatgagcttggacacgctggatcttgcactccacaggataagccgcttcatggacacgtggaatggaacaaagcaacaagctagctgccagcagcaagaacagcaataa</cdnaseq>

Protein Sequence

<aaseq>MGGKLLPAAAFAGSAPPLSQVATSAAHGEDSPYFAGWKAYDEDP YHAVDNPDGVIQMGLAENQVSFDLLEAYLRDHPEAAGWSTGGAGAGSFRDNALFQDYH GLKSFRKAMASFMGKIRGGKARFDPDHIVLTAGATAANELLTFILANPGDALLIPTPY YPGFDRDLRWRTGVNIVPVRCDSANGFQVTVAALQAAYDEAAAVGMRARAVLITNPSN PLGTTVRRKMLDDILDFVSRNDIHLISDEIYSGSVFAAPDLVSVAELVEARGGDGIAG RVHIVYSLSKDLGLPGFRVGVVYSYNDAVVTAARRMSSFTLVSSQTQKTLAAMLSDEA FAGEYIRTNRRRLRERHEHVVAGLARAGVPCLRGNAGLFVWMDMRRLLLGGGGVGGEL RLWEKLLRQAKLNISPGSSCHCSEAGWFRVCFANMSLDTLDLALHRISRFMDTWNGTK QQASCQQQEQQ</aaseq>

Gene Sequence

<dnaseqindica>854..1751#593..753#141..467#ggatcatctcatctcacacacccaaaaaccttaatttgcttgattgcctcttgtactgcagtgttgcttcctacactgccattgcatataaattttgcactgcaagattaattcagtctgagagaacgagagagaacatcatgggtggcaagctgttgcctgctgcggcgttcgccgggtcggcgccgccgctgtcgcaggtggcaacgtcggcggcgcacggcgaggactcgccgtacttcgccgggtggaaggcctacgacgaggacccctaccacgccgtcgataaccccgacggcgtcatacagatgggcctcgccgagaaccaggtctccttcgacctcctcgaggcctacctccgtgaccacccggaggccgccggctggagcaccggcggcgccggcgccggtagcttcagggacaacgcgctgttccaggattaccatggcctcaagagcttcaggaaggtacgtgagagagagagagagagagagagagagtttgcaattcttgctttgcttggctcgaacgccatgcatggtggactgatcgagatggcggcggcttgcttggccaccattgttgcttgcaggcgatggcgagcttcatggggaagatacgcggcggcaaggcgaggtttgaccccgaccacatcgtgctcaccgccggcgccaccgccgccaacgagctcctcaccttcatcctcgccaaccccggcgacgccctgctcatccctaccccttactaccccgggtaagccactgttccattgccattgccattgccatgcatctagctagcttgggatcgatcgagcagagtggcaggctgagctgacatccatggcgtgcaggtttgacagggacttgaggtggaggacgggggtgaacatcgtgccggtgcggtgcgacagcgcgaacgggttccaggtcacggtcgccgcgctccaggcggcgtacgacgaggccgccgcggtggggatgcgcgcccgcgccgtcctgatcaccaacccctccaacccgctcggcaccacggtcaggcgcaagatgctcgacgacatcctcgacttcgtgtcgcgcaacgacatccacctcatctccgacgagatctactccggctccgtcttcgccgcgccggacctcgtcagcgtggcggagctcgtcgaggcgcgcggcggcgacggcatcgccggccgcgtccacatcgtctacagcctctccaaggacctgggcctcccggggttccgcgtcggcgtggtctactcctacaacgacgccgtcgtgacggcggcgcggcggatgtcgagcttcacgctggtgtcgtcgcagacgcagaagacgctggcggcgatgctgtccgacgaggcgttcgccggggagtacatccgcaccaaccgccgccggctccgggagcggcacgagcacgtggtggccgggctggcgcgcgccggcgtgccgtgcctgcgcggcaatgctgggctgttcgtgtggatggacatgcggcggctgctgctcggcggcggcggcgtcggcggcgagctgaggctgtgggagaagctgctgcgccaggcgaagctgaacatctcgccggggtcgtcgtgccattgctcggaggccggctggttcagggtgtgcttcgccaacatgagcttggacacgctggatcttgcactccacaggataagccgcttcatggacacgtggaatggaacaaagcaacaagctagctgccagcagcaagaacagcaataatttttagttaatttggttaattagttagttaattgattaaaggaagtataagtaatttttttggtaaattattaaaaaaaacatatttatcagttgcaaaggtagttatattatggggattaagtggtgacatacacttgtttcatttatctattgtaccattagttttgtaaccaaatttgtctctctcacatgttggagagacgacaaattaatacagataagactggtctagctcattcaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0192900, RefSeq:Os01g0192900