Os01g0194300

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0194300| Description = Similar to NPR1| Version = NM_001048821.1 GI:115435055 GeneID:4327315| Length = 4605 bp| Definition = Oryza sativa ...")
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Gene Name

Os01g0194300

Description

Similar to NPR1

Version

NM_001048821.1 GI:115435055 GeneID:4327315

Length

4605 bp

Definition

Oryza sativa Japonica Group Os01g0194300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5059605..5064209

Sequence Coding Region

5059881..5060119,5060682..5060882,5061091..5061838,5063560..5064120

Expression

GEO Profiles:Os01g0194300

Genome Context

<gbrowseImage1> name=NC_008394:5059605..5064209 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5059605..5064209 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccgccgaccagccacgtcaccaacgcgttctccgactcggacagcgcgtccgtggaggaggggggcgccgacgcggacgccgacgtggaggcgctccgccgcctctccgacaacctcgccgcggcgttccgctcgcccgaggacttcgcgttcctcgccgacgcgcgcatcgccgtcccgggcggcggcggcggcggcggcgacctgctggtgcaccgctgcgtgctctccgcgcggagccccttcctgcgcggcgtcttcgcgcgccgcgccgccgccgccgcaggcggcggcggcgaggatggcggcgagaggctggagctccgggaactcctcggcggcggcggcgaggaggtggaggtcgggtacgaggcgctgcggctggtgctcgactacctctacagcggccgcgtcggcgacctgcccaaggcggcgtgcctctgcgtcgacgaggactgcgcccacgtcgggtgccaccccgccgtcgcgttcatggcgcaggtcctcttcgccgcctccaccttccaggtcgccgagctcaccaacctcttccagcggcgtctccttgatgtccttgataaggttgaggtagataaccttctattgatcttatctgttgccaacttatgcaacaaatcttgcatgaaactgcttgaaagatgccttgatatggtagtccggtcaaaccttgacatgattactcttgagaagtcattgcctccagatgttatcaagcagattattgatgcacgcctaagcctcggattaatttcaccagaaaacaagggatttcctaacaaacatgtgaggaggatacacagagcccttgactctgacgatgtagagctagtcaggatgctgctcactgaaggacagacaaatcttgatgatgcgtttgcactgcactacgccgtcgaacattgtgactccaaaattacaaccgagcttttggatctcgcacttgcagatgttaatcatagaaacccaagaggttatactgttcttcacattgctgcgaggcgaagagagcctaaaatcattgtctcccttttaaccaagggggctcggccagcagatgttacattcgatgggagaaaagcggttcaaatctcaaaaagactaacaaaacaaggggattactttggggttaccgaagaaggaaaaccttctccaaaagataggttatgtattgaaatactggagcaagctgaaagaagggacccacaactcggagaagcatcagtttctcttgcaatggcaggtgagagtctacgaggaaggttgctgtatcttgaaaaccgagttgctttggcgaggattatgtttccgatggaggcaagagtagcaatggatattgctcaagtggatggaactttggaatttaacctgggttctggtgcaaatccacctcctgaaagacaacggacaactgttgatctaaatgaaagtcctttcataatgaaagaagaacacttagctcggatgacggcactctccaaaacagtggagctcgggaaacgctttttcccgcgatgttcgaacgtgctcgacaagatcatggatgatgaaactgatccggtttccctcggaagagacacgtccgcggagaagaggaagaggtttcatgacctgcaggatgttcttcagaaggcattccacgaggacaaggaggagaatgacaggtcggggctctcgtcgtcgtcgtcatcgacatcgatcggggccattcgaccaaggagatga</cdnaseq>

Protein Sequence

<aaseq>MEPPTSHVTNAFSDSDSASVEEGGADADADVEALRRLSDNLAAA FRSPEDFAFLADARIAVPGGGGGGGDLLVHRCVLSARSPFLRGVFARRAAAAAGGGGE DGGERLELRELLGGGGEEVEVGYEALRLVLDYLYSGRVGDLPKAACLCVDEDCAHVGC HPAVAFMAQVLFAASTFQVAELTNLFQRRLLDVLDKVEVDNLLLILSVANLCNKSCMK LLERCLDMVVRSNLDMITLEKSLPPDVIKQIIDARLSLGLISPENKGFPNKHVRRIHR ALDSDDVELVRMLLTEGQTNLDDAFALHYAVEHCDSKITTELLDLALADVNHRNPRGY TVLHIAARRREPKIIVSLLTKGARPADVTFDGRKAVQISKRLTKQGDYFGVTEEGKPS PKDRLCIEILEQAERRDPQLGEASVSLAMAGESLRGRLLYLENRVALARIMFPMEARV AMDIAQVDGTLEFNLGSGANPPPERQRTTVDLNESPFIMKEEHLARMTALSKTVELGK RFFPRCSNVLDKIMDDETDPVSLGRDTSAEKRKRFHDLQDVLQKAFHEDKEENDRSGL SSSSSSTSIGAIRPRR</aaseq>

Gene Sequence

<dnaseqindica>4091..4329#3328..3528#2372..3119#90..650#gaggcctcctcctcgcctcgcctcgccacgccgcgccgcgacgcgacgcgccgtggtcagctggtcgccggtgcgggtgcgggtgcgcaatggagccgccgaccagccacgtcaccaacgcgttctccgactcggacagcgcgtccgtggaggaggggggcgccgacgcggacgccgacgtggaggcgctccgccgcctctccgacaacctcgccgcggcgttccgctcgcccgaggacttcgcgttcctcgccgacgcgcgcatcgccgtcccgggcggcggcggcggcggcggcgacctgctggtgcaccgctgcgtgctctccgcgcggagccccttcctgcgcggcgtcttcgcgcgccgcgccgccgccgccgcaggcggcggcggcgaggatggcggcgagaggctggagctccgggaactcctcggcggcggcggcgaggaggtggaggtcgggtacgaggcgctgcggctggtgctcgactacctctacagcggccgcgtcggcgacctgcccaaggcggcgtgcctctgcgtcgacgaggactgcgcccacgtcgggtgccaccccgccgtcgcgttcatggcgcaggtcctcttcgccgcctccaccttccaggtcgccgagctcaccaacctcttccaggtccgcctcttcgcagctgcctctccttttccccttccattcgcgatgctcatgtcatgccagttcatctcttccctgtgcttgcttggatgcgtattgctcatagaagtgggggtttaaagatgcatttttttagttgcgcgcgtggagctttgctttaggcggcaaaatgaactacttctgaaggagaggggagatggtctgaactgaatcactcctaatcacgttaatcattgcaatttggattactgcaattggaggcctgtgataattgcattgtgattaacttgctgtcatattggcgatgaacagtattcaggtttagttgtttgcgattttggggattcacgtgtgcttggtgctgtatgcattgcagagaaaaacaaaagcttacagttgtatgaacgtgtggatgcgactccctgcttcaattagaaatcgtccaaaaagctagtacatcttaagccattaatcaactcagatcatgcactgttacatcggttatgtttgatccaatcctcctaatcagtttattctaatgtctgaatcgaactgcctggctaactgtccttatctaacatgttgctgcttactgatcttgggggtgcttgccgttctcgttgttatttatcggattcttcttggtcatgttgacgcgaaaatggaagttaactgtgtttgatatccagcaagagtggtgctgatatagtaaaggtgtttcttaaccttttcttttcttgcaaaagagcagttccttattgaagtatcttcagataaggcgattggactgtgcaccatcctattctaggctgcttcaagtacacatgtttcactcaattgtaccatgatagggacatactcacataccgcacattatccttccaaatttgtcaatgctgcattaatgtgacagtgatatttatgcacagaaagcacaatcatatgttttccacttaaacttgactgtatctcagtgtttttaaattgaaatgtcacacatattcgaagcaataataaacgaacaacaaaaaaaatatgcatgtatcttatggtaaaatttgccttggctatattacagggggaaaatgagtggctacactccaatcacagcatgtttatccaagaacacaaaaggaaatttcaaaattttaaatgtaaaagcctaaggtcactaatgtttatatatatatcaacttttattctctttacagtctttggaagttgtttttaggagttatgggggttgtttttcagtaattctgtctcaaaattatattgcttgcgtggctgcgccatacgtgccaatctgacaagaaccaaacatgattgtactaattgtatatatagcctagcttcctttggtccaattgatggccctcagccttgtatttatatttataaatcttctggcgttaacattactctacattgaacttgctatttcaagtattatgttggtgtttggcttgtaatattttggtttctaaaaagaattaaaaccaggaagtttccttttctaataaaaaatgggccttgatgctacttgcttttgttgacctttgttttagaacgtggtactgtttttttcagataaggctgttccatactgaatccattaattattgctagcccaatgcatgtcagtcggttatcgtttgtaatgtttcactattttaagaagccagaaccaaagcaatgatatattcttctttttcatgcagcggcgtctccttgatgtccttgataaggttgaggtagataaccttctattgatcttatctgttgccaacttatgcaacaaatcttgcatgaaactgcttgaaagatgccttgatatggtagtccggtcaaaccttgacatgattactcttgagaagtcattgcctccagatgttatcaagcagattattgatgcacgcctaagcctcggattaatttcaccagaaaacaagggatttcctaacaaacatgtgaggaggatacacagagcccttgactctgacgatgtagagctagtcaggatgctgctcactgaaggacagacaaatcttgatgatgcgtttgcactgcactacgccgtcgaacattgtgactccaaaattacaaccgagcttttggatctcgcacttgcagatgttaatcatagaaacccaagaggttatactgttcttcacattgctgcgaggcgaagagagcctaaaatcattgtctcccttttaaccaagggggctcggccagcagatgttacattcgatgggagaaaagcggttcaaatctcaaaaagactaacaaaacaaggggattactttggggttaccgaagaaggaaaaccttctccaaaagataggttatgtattgaaatactggagcaagctgaaagaagggacccacaactcggagaagcatcagtttctcttgcaatggcaggtgagagtctacgaggaaggttgctgtatcttgaaaaccgaggtaaccttcacatatatcataatgggttcataatgctggtttctttggaattaactgtttttggtcttggcaacaaaaggaaggttacatttcagtttagtgtgtttcatgcagagtgcagtttcaagagtttcccagtgcccattttttagaacttccattttgttatgaagttgtatcttgatattatagtttttgtacgatgtagttgctttggcgaggattatgtttccgatggaggcaagagtagcaatggatattgctcaagtggatggaactttggaatttaacctgggttctggtgcaaatccacctcctgaaagacaacggacaactgttgatctaaatgaaagtcctttcataatgaaagaagaacacttagctcggatgacggcactctccaaaacaggtaatacacggcactctgtttattcacactgcctccaagcgatgtatattttgaatctaatgctacaaacttgtgtggcacactgctacacatgcaaatatttttgatttttcatattttctgatggaagctaaaactatagatgctcccattttgactgataggttcactgttgaataccctgagaggtttatgcaatgttgcatatcttttagctctaacactgtcaatgtgaaccatggacaattttgctcttttttgttcattcagaatgatagttcatactacctgaagattaaataattgacaaagatatgtacactttactgtggtaatttctaattttaatctggtcttgaataggtagcctagttaatctttcttggggtgcatgtgttgtctatagacttttgtggttgaaaaatctttgtacatcaagagcacagaatatacttaggtatatctataggaacaactgcttgagattcatcacagaagttgcaaagacattacattctcttaattggacatagactaattgcaagctgaatgtgtataccagtggagctcgggaaacgctttttcccgcgatgttcgaacgtgctcgacaagatcatggatgatgaaactgatccggtttccctcggaagagacacgtccgcggagaagaggaagaggtttcatgacctgcaggatgttcttcagaaggcattccacgaggacaaggaggagaatgacaggtcggggctctcgtcgtcgtcgtcatcgacatcgatcggggccattcgaccaaggagatgaacaccattgctcccaaatagttgccatattgatagctaactgtcctcctggagctactcacctgatggttgccttctgtcaattgccccccaaatatattctcaatggtttaggcttgtacagtattagttcttacagctattgccccgtcaattgtgaaacgcagaagtttcactagtgcttgtactcgaggtgtaatacaagtgcttgaattttgagttgtacttggaatttccagtggtttgctcgtaaaaatgagatgatttcttggctccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0194300, RefSeq:Os01g0194300