Os01g0198100

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0198100| Description = Conserved hypothetical protein| Version = NM_001048840.1 GI:115435093 GeneID:4327337| Length = 3854 bp| Definition ...")
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Gene Name

Os01g0198100

Description

Conserved hypothetical protein

Version

NM_001048840.1 GI:115435093 GeneID:4327337

Length

3854 bp

Definition

Oryza sativa Japonica Group Os01g0198100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5319625..5323478

Sequence Coding Region

5319625..5319656,5320123..5320306,5320644..5320727,5321391..5321562,5321707..5322020
,5322090..5322367,5323053..5323356

Expression

GEO Profiles:Os01g0198100

Genome Context

<gbrowseImage1> name=NC_008394:5319625..5323478 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5319625..5323478 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatccccacggcggtgggaaccaaatgcgcgagccggcgctcccggcggcggtcggcgcggagctggagcggctggaggcgaggctgggccagctcgcctgcgcggaggcgcggcggcagctcgcggagctcggcgagccggcggcggcgcgggtgctccgggcgattggggaggcgcgccaggtccgtacgctctccggcttcatcaggcacatggcgaaccaggagaggatgaagcgcaacgcgcggggcatccccaccgcccacagcgccgcatgcatctccggcccctgccgcgaagaggaatctatatccactccactgtactacaatgaggttcaaatggatgctcaaacacccaacgacatggtggaggttgggagtcccaaccaacagatgccgctccgtttgcatgacaatggcggttctgtcggacatattgctcgtgtggttccggaccttgctaacccagcagttgggagcccatatggtcgaatatcttctgtgctgctgcagaaccagaactgcgttgaaggttatacgccttcccgtggaatggtttctcctgcgtccaaccaggttggtagccctggccaccgcatgccatctgggctgcagagacatatggagattgacagccccatccagccgatcgtttctactccagaaagagtttccaccccgagccctgtgcgggatctatcaagatgtgtcgagaatatggctggcccctcaggaagtcctccatgtcccatttgggtgatgccgcaaattcctccagcaatctgtcctgacacgaccaatgtgttgagggaggtagtgagccctcagatgctagcgctgggagagttggagttcaggaagatatttatgatttttgcttatctttcctggaataagaaaggagtaaagcctccattatctacaccaaaaagtagtaagatagaagatgtcctctccgtggacagtatcagatccttgaagtcaatgtccatggctcaatttgagtcacgaatctggagcacatttggtcacgataatatatcatcttcagatagagcaaagaaccttgattctggtccaggtatgtcaaaagtctaccattgtaatgttgagataagagggggtacagttgtcaaaattttcaagggaccatatattgagaataggaggactcatcttcagaaagttcttggtgatgataacgtccttgtagtaaaatttatggagatatcttcagacactgagactgatttgtctacctatttggaacactaccataaggttgctgaagagggtattgttttgggtttgcgctgctatcgatttttcctttacaaggacggcgggaaagagaataaaatg</cdnaseq>

Protein Sequence

<aaseq>MNPHGGGNQMREPALPAAVGAELERLEARLGQLACAEARRQLAE LGEPAAARVLRAIGEARQVRTLSGFIRHMANQERMKRNARGIPTAHSAACISGPCREE ESISTPLYYNEVQMDAQTPNDMVEVGSPNQQMPLRLHDNGGSVGHIARVVPDLANPAV GSPYGRISSVLLQNQNCVEGYTPSRGMVSPASNQVGSPGHRMPSGLQRHMEIDSPIQP IVSTPERVSTPSPVRDLSRCVENMAGPSGSPPCPIWVMPQIPPAICPDTTNVLREVVS PQMLALGELEFRKIFMIFAYLSWNKKGVKPPLSTPKSSKIEDVLSVDSIRSLKSMSMA QFESRIWSTFGHDNISSSDRAKNLDSGPGMSKVYHCNVEIRGGTVVKIFKGPYIENRR THLQKVLGDDNVLVVKFMEISSDTETDLSTYLEHYHKVAEEGIVLGLRCYRFFLYKDG GKENKM</aaseq>

Gene Sequence

<dnaseqindica>3823..3854#3173..3356#2752..2835#1917..2088#1459..1772#1112..1389#123..426#aatttcctcgctccaaacctccaaaccgatcgattcctcgttcgatctccaccgccgcggagaggcgcggcgcggcgtgggtgggtgtgtgtggccgccttaaaccctaaaccctctcaaccatgaatccccacggcggtgggaaccaaatgcgcgagccggcgctcccggcggcggtcggcgcggagctggagcggctggaggcgaggctgggccagctcgcctgcgcggaggcgcggcggcagctcgcggagctcggcgagccggcggcggcgcgggtgctccgggcgattggggaggcgcgccaggtccgtacgctctccggcttcatcaggcacatggcgaaccaggagaggatgaagcgcaacgcgcggggcatccccaccgcccacagcgccgcatgcatctccggcccctgccgcgaaggtgagggggtttgctgcttggcattttttgttcaccgactctttttttctcatgcgaggccaatattttgttcaccgcccatttcgttttttttttgtgaggaaaaccctttttgaattttaatcttaatggatggtcgcagaggaggattagctgcgtttgtgcttcctatggcagtgcgttttagcgtgtttttttggctgcaaaacccgcactgtttgggagattttttcagctcttttttttttgttgcgcctacgcccctgtttaatgctaatgcacttttcgtaggcggaagggagtatcttcctttttttgtttttgtttttagttgggctatcgattcctgctctcgatttggagaatcttgccaagttgtgatagggagcaacattctgtaatggtgacgctcagttttcgaattcaatgcttgtcgatcgtattttttttctccttaattttgccacccttaagtcgtggttttggtaaccggttgattttagcctcgttggttcagcttagtatgatggcatttttctatttttttttctttttacctttgcatttcgcccatttggtatggttgatttggtttgcatgttgtttctttctaaggtctttgtagctgttatacatatcctaaattgtgaagtacttcttactaataagtcttgtggttacacagaggaatctatatccactccactgtactacaatgaggttcaaatggatgctcaaacacccaacgacatggtggaggttgggagtcccaaccaacagatgccgctccgtttgcatgacaatggcggttctgtcggacatattgctcgtgtggttccggaccttgctaacccagcagttgggagcccatatggtcgaatatcttctgtgctgctgcagaaccagaactgcgttgaaggttatacgccttcccgtggaatggtttctcctgcgtccaaccaggtggctgtgcagattaactttcctacccaaccaatggctcatgctttgcctaatgatgttatgatgcaggttggtagccctggccaccgcatgccatctgggctgcagagacatatggagattgacagccccatccagccgatcgtttctactccagaaagagtttccaccccgagccctgtgcgggatctatcaagatgtgtcgagaatatggctggcccctcaggaagtcctccatgtcccatttgggtgatgccgcaaattcctccagcaatctgtcctgacacgaccaatgtgttgagggaggtagtgagccctcagatgctagcgctgggagagttggagttcaggaagatatttatgatttttgcttatctttcctggttagattctcttcggtttatgctttttacataataaagaacaaagatgtttttatagcagaacatggactattttctaaggctaatatggcttttatctgtgttatgctgttgctaatacaccattttctctttttgttacaggaataagaaaggagtaaagcctccattatctacaccaaaaagtagtaagatagaagatgtcctctccgtggacagtatcagatccttgaagtcaatgtccatggctcaatttgagtcacgaatctggagcacatttggtcacgataatatatcatcttcagatagagcaaaggttattgcaacaccagtactcttaataattttcactaaaggtctctaaaaatgatcaaacatgatgatcccttttcatattggatcatgatcattgtaaatggaaccacctacgcaagtcattgtccttgaattttgtatgtgcgtagataacataatacatgcttactctagtgcacattggctctcagcttctgatgccttccagatatcaccctttcttcattatgattctagtgtccaggtttgctagatgtacttctgacttgtacctcctaacttaaatgtcgacttggtttacttaataactacaaaaaaaaattgaaatgggtacttgattacaatcatatgacactgcataccatgatggatggaacaaaaactaccttttgtacccaggttttgagtggccagttcttcagaatgctgggacgtcacaattcatttcctacgataagtctgggctggctgacatgttatccacaaccattatatcttttacatctttctagcaatacaattgtgcatgtttttcattcacaatttccttatgagaatattatgctaacattttatttttctgttttccactatttgttccttttcctctattataagttataacttgagcctgatgaaattattctccatgtaatgcttgcagaaccttgattctggtccaggtatgtcaaaagtctaccattgtaatgttgagataagagggggtacagttgtcaaaattttcaaggtgtgtggtgcttttgatacttttatacgtgctcattgtttaaccatgatatttttagatggcctactatttgatgttctcctatctaccagtcatgattgtgtaatgttcatgttcattgctgttgactgtttgcgaatctacccctcacataaaggtgtatatcacccatgcatccttcttaagctgcctaagatttttctggaagttctaatataaagactaattgcaataaaggtcaaggcgccaaaatcaacaaatgctgcactctgtgataatttattttgtaaggaacttaaggtgccatcgttatatttttaacattggctgggtgcagggaccatatattgagaataggaggactcatcttcagaaagttcttggtgatgataacgtccttgtagtaaaatttatggagatatcttcagacactgagactgatttgtctacctatttggaacactaccataaggttgctgaagagggtattgttttgggtttgcgctgctatcgatttttccgtaagttaccttttgttgcaatgctggatctatttggatttaatacgagtggtaggctgatgaatacacataatgtagagatggttactgcaatttatgatatgccattagggtcaaagttctctaatgtcttcatacaaacaatggtaacagattttttgaagacatgaacttagggtgatttgggtcatgttaactggcatggggatgacacacatgctttttttagaattgtcggaaaaaaatggattactagtaatagtactgtaattatatgcaaattagaaagcaatatccagtaaccagtatgaggttgccaacaggtcaatttgttgctgagaaactagtgccattttctgagttgtaaactcttgtattgttaccaagtgtccccattatgtttcatggttcctaatttgtcactgtttcatgattggatctgcattgattaatgtgccttttttagtttacaaggacggcgggaaagagaataaaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0198100, RefSeq:Os01g0198100