Os01g0198500

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Revision as of 04:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0198500| Description = Conserved hypothetical protein| Version = NM_001048842.1 GI:115435097 GeneID:4327339| Length = 1103 bp| Definition ...")
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Gene Name

Os01g0198500

Description

Conserved hypothetical protein

Version

NM_001048842.1 GI:115435097 GeneID:4327339

Length

1103 bp

Definition

Oryza sativa Japonica Group Os01g0198500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5351505..5352607

Sequence Coding Region

5351700..5352413

Expression

GEO Profiles:Os01g0198500

Genome Context

<gbrowseImage1> name=NC_008394:5351505..5352607 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5351505..5352607 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcccgggttcgggaagcggctgatgcacgtgctgcgcgcggtgtaccacatgctgcggcgcgggctgtgccggaagcgcctcatgatggacctccacctgctcctcggccggggcaagctcgccggcagggcgctccgcgacgtcctcctcgcccaccagccgcacggcggcgcggctgccgtggcggtcatgggaggcggcgccggggtggcgcggggtggtgactcgtcgtcgtcgccgctgtcggcgtcgttcttccaccacaaccccagggacgtggagttcagctgcaccaccacgccgtcctacgcgccgggggtcttccccttcaggttccgcggccgcggcggctcacgccacgccggcggcggcgccagcaactacggcgggctcgacgcctccgccgtggcccgcgtcttcgagatgctcaacgccgacgccgcggctgctgctggcgccggcggggagacgccgctgtcgtcgatgcccggcgccacgccgtccccgttgctggcgctcagcctcggccgcagccccgccgggacgcggcagctccgcgtcaccgactcgccgttccccgtcgagccgccggagggcgccgtcgacggccgcgtcgacgacaaggccaccgacttcatcgagtggttccgccgccagctcctccagcagcaggcgtccgccgcgccaacgccggactaccgtggctag</cdnaseq>

Protein Sequence

<aaseq>MEPGFGKRLMHVLRAVYHMLRRGLCRKRLMMDLHLLLGRGKLAG RALRDVLLAHQPHGGAAAVAVMGGGAGVARGGDSSSSPLSASFFHHNPRDVEFSCTTT PSYAPGVFPFRFRGRGGSRHAGGGASNYGGLDASAVARVFEMLNADAAAAAGAGGETP LSSMPGATPSPLLALSLGRSPAGTRQLRVTDSPFPVEPPEGAVDGRVDDKATDFIEWF RRQLLQQQASAAPTPDYRG</aaseq>

Gene Sequence

<dnaseqindica>195..908#atccaccacccacccatccaacaccacccttctccaaagctgcaaaatccaaagcgagaaaccgccattgccacccacctcgattccgctctcgatctcagctcactgctgcattgcggctgtcgctgtcagctcggatcggcgccacggaggccaccgcggacaggagggccgtgcagccggccggcggcggcatggagcccgggttcgggaagcggctgatgcacgtgctgcgcgcggtgtaccacatgctgcggcgcgggctgtgccggaagcgcctcatgatggacctccacctgctcctcggccggggcaagctcgccggcagggcgctccgcgacgtcctcctcgcccaccagccgcacggcggcgcggctgccgtggcggtcatgggaggcggcgccggggtggcgcggggtggtgactcgtcgtcgtcgccgctgtcggcgtcgttcttccaccacaaccccagggacgtggagttcagctgcaccaccacgccgtcctacgcgccgggggtcttccccttcaggttccgcggccgcggcggctcacgccacgccggcggcggcgccagcaactacggcgggctcgacgcctccgccgtggcccgcgtcttcgagatgctcaacgccgacgccgcggctgctgctggcgccggcggggagacgccgctgtcgtcgatgcccggcgccacgccgtccccgttgctggcgctcagcctcggccgcagccccgccgggacgcggcagctccgcgtcaccgactcgccgttccccgtcgagccgccggagggcgccgtcgacggccgcgtcgacgacaaggccaccgacttcatcgagtggttccgccgccagctcctccagcagcaggcgtccgccgcgccaacgccggactaccgtggctagcccgccgaccgccgccgccatcgccgccgcggcatgggcgagcgagcgcgaatactaaagcacgagaagcttatatatatatataagggactatgtggcgtcaaaattgtttcactgacatgtgggtttcgagtttttctacctgcatggctgcgtgtaatttttcctcggttaattaatttcctcgcttgtgat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0198500, RefSeq:Os01g0198500