Os01g0202800

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Revision as of 04:28, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0202800| Description = Similar to NOD26-like membrane integral protein ZmNIP1-1| Version = NM_001048863.1 GI:115435139 GeneID:4327074| Leng...")
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Gene Name

Os01g0202800

Description

Similar to NOD26-like membrane integral protein ZmNIP1-1

Version

NM_001048863.1 GI:115435139 GeneID:4327074

Length

2447 bp

Definition

Oryza sativa Japonica Group Os01g0202800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5662303..5664749

Sequence Coding Region

5662303..5662516,5662871..5662932,5663017..5663232,5664501..5664749

Expression

GEO Profiles:Os01g0202800

Genome Context

<gbrowseImage1> name=NC_008394:5662303..5664749 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5662303..5664749 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcatgaacaaaaacctgctgattcttgcggaaattctggggacatatttcatgatattcgccgggtgcggcgccgtggtggtgaaccagagcaccggcggcgcggtgacgttcccggggatctgcgccgtgtgggggctcgtcgtcatggtgctagtctacactgtcagccacatctccggtgcccacttcaaccccgccgtcaccgtcgccttcgccacgtgcggacgcttccggtggaagcaggtgccatcgtacgtggtggcccaggtgctgggatccaccatggcaagcctgacgctgcgcgtggtgttcggcggcggcggcggcggcgcgcgcggggagcacttgttcttcgggacgacgccggcggggtcgatggcgcaggcggcggcgctggagttcgtcatctccttcttcctcatgttcgtcgtctccggcgtcgccacggacaacagagcaatcggtgaattggctgggctcgctgtcggtgcgacggtcgcggtgaacgtgctcttcgcagggccggtgacgggggcgtcgatgaacccggctcggagccttggtccggcgatggtggcggggaggtacggcggcgtgtgggtgtacgtggcggcgccggtgagcgggacggtgtgcggcgcgtgggcgtacaacctgctccgcttcaccgacaagccgctgcgtgacatcgccaacaccgcctccttcctcaggaggagctcgcgtaggagttag</cdnaseq>

Protein Sequence

<aaseq>MCMNKNLLILAEILGTYFMIFAGCGAVVVNQSTGGAVTFPGICA VWGLVVMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGSTMASLTL RVVFGGGGGGARGEHLFFGTTPAGSMAQAAALEFVISFFLMFVVSGVATDNRAIGELA GLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGRYGGVWVYVAAPVSGTVCGAWA YNLLRFTDKPLRDIANTASFLRRSSRRS</aaseq>

Gene Sequence

<dnaseqindica>2234..2447#1818..1879#1518..1733#1..249#atgtgcatgaacaaaaacctgctgattcttgcggaaattctggggacatatttcatgatattcgccgggtgcggcgccgtggtggtgaaccagagcaccggcggcgcggtgacgttcccggggatctgcgccgtgtgggggctcgtcgtcatggtgctagtctacactgtcagccacatctccggtgcccacttcaaccccgccgtcaccgtcgccttcgccacgtgcggacgcttccggtggaagcaggtaacaaagcattttcttggatctgaaaatgacatcccaaccaacgacaatttttttccagctttctgtagcacaaacggagttatcagtggcactgtagactgtccgacaaaaacagatttttggtttcatggttcgcttattggctgaccagccgcatccaaaatttaaattcaaaaaagttgatttaaaggtttttgttatatacgtgtgtataaaaaatatacagtatacaaagtttgtatacgtgtatataaagtttgtatacatatatagtattaagaaataaaaaaccaagaaaagaaaaaaaagggaaagaaaaaaaggaaaagaaacgaaaaaaaagaaggaaaacaggaaaaccatatgtgggaatcagatctactgtttttttccattgcataggaatcggacagcatgtttttttgtcgttgtttttccccatttttaagggaaccggatctacgattttttttgtttttttcgctattttttttctcaaactctttttttttgcttttccctgtttttaaggggaatcggacttcttttttttcggtttttttcgctattttttttatttagacggacggaggaaacactttgtattttttaagtagtagagatagagaagagatatatttttttaaaaaaagtaaagtagtataagtagaagagaagattacggacaagaaatttttttagggagtcgtagcttttctctaggagtcggacctttttttttctttttttcatggtagaagttttttctcctttttttctcgctttttttctccaccggggagttggacgttttttttttgccgattgattttttttcctccttttttgtttttctcgcttttttttttccaaacggacgacggaaatttcttttattttttaaatagtagtagatagaagatagataatatttcttttctcctttaacattggcttttagattgtaaagaacatggatgtaaaagtttttaactgtcaattaaaaacgagaattggaaggagagacattttgctccaaacattttctaagaaggaattgtgatctcgttgattgaaaaccacacacaccacttaacgctgtactattaagtacatctctttctacccgtcaattatttgtggttgcttccttcaatttttccagggcttatcaaccgtggatcaaacgatggatcggattatgtttcggttaaatttactgccaataactcatttgtggtgatcaatgtgtgtgtgtggtgcaggtgccatcgtacgtggtggcccaggtgctgggatccaccatggcaagcctgacgctgcgcgtggtgttcggcggcggcggcggcggcgcgcgcggggagcacttgttcttcgggacgacgccggcggggtcgatggcgcaggcggcggcgctggagttcgtcatctccttcttcctcatgttcgtcgtctccggcgtcgccacggacaacagagcagtataagatcgaacaccaaaactaacaaattaactatatatatatgcatgatgatcgatgataattttgtggtgtacaacacagatcggtgaattggctgggctcgctgtcggtgcgacggtcgcggtgaacgtgctcttcgcagggtatgtgttgaagtaaatcataaaatttcacagttaactacgtgctgttgatgccgcattagtagtagttgttcggtattctttttcgtttatgcttatacttatcagccagtttgaatttttaaaattaaatttgaaactaattttgtgaatttttttcatcaaagtttatttttcagcctttacttttaaagcgctaaaaacctgtatataaaagttttattcacaaattatcttttttttataaacacgtcgtttgatttattccacgaataagctaaacgatgaggcccctcattgttgttgttgctgctgctgctacagtgtgtattgcattgggggtttaatttgcaggccggtgacgggggcgtcgatgaacccggctcggagccttggtccggcgatggtggcggggaggtacggcggcgtgtgggtgtacgtggcggcgccggtgagcgggacggtgtgcggcgcgtgggcgtacaacctgctccgcttcaccgacaagccgctgcgtgacatcgccaacaccgcctccttcctcaggaggagctcgcgtaggagttag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0202800, RefSeq:Os01g0202800