Os01g0207700

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Revision as of 04:28, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0207700| Description = Protein of unknown function DUF6, transmembrane domain containing protein| Version = NM_001048888.1 GI:115435189 Gene...")
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Gene Name

Os01g0207700

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001048888.1 GI:115435189 GeneID:4325526

Length

4244 bp

Definition

Oryza sativa Japonica Group Os01g0207700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5843682..5847925

Sequence Coding Region

5843682..5843854,5844001..5844063,5844154..5844270,5847160..5847925

Expression

GEO Profiles:Os01g0207700

Genome Context

<gbrowseImage1> name=NC_008394:5843682..5847925 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5843682..5847925 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgccaagaagccatatttcattgctatcatcatacaggtgatctacactggcctgttcgtcgtcaccaaggcagccttcaaccatgggacgaacaccttcatcttcatcttctaccgccaggcagctgcctctctcctgctgctgcctctcgccattattctcgaacggaaaaatgcgccgccgatgtcgatccggctgtttgccaagcttttcttgtatgctctgcttgggaacacaataagctttaacctgtacaacacgggcctcaagtacacttcgtcgacggtggcatcggcggcagccagctcggtgcccgtactgaccttcttcttcgcagtcctactaaggctggaagtgatccggctgaggcgcttgtcgggcgtggcgaaggtggccggagtggggctatgcctcggcggcgtgctggtgatcgcgctctactccgggccggcgttaagccccctgaaccaccaccgcgcgttcggcggcggcgcagagagcggaagcagtggcgcggcgacgagggcgaggtgggtgacggggacgctcctgatgctgctgtccaacgtgacgtggtcgctctggatcgtgctcatgtcgccgctgctcaacgagtacccctgcaagatgctggccacggcgctgcagtccctgctcagcgcggcgcagtcgctggtgctcgcggcggcggcggcggcgcggaacccggcggcgcggaggctgcggctcgacgccggcctcctcgccgtcgcctactccgccgtcgccgtcaccggggtctcctactacctccaggcgtggtgcatccagaagaaggggcccgtgttcctggccatgtccagcccgctcagcttcgtcttcaccatcttctgctcctccttcttcctcggcgaggtcgtccacctcggcagcgtcgtcggcggggtcctgatggtggccggcctctacagcgtgctctggggcaagagcaaggagcacgacacgctcacggtcgccgccggacagcaggaagaagacgctgctgcaccacccgctgcagagagcagcagcagcagtgacaatgagagcaaacaccagcaggggagatttgcgtcggcagatcaacaagtctag</cdnaseq>

Protein Sequence

<aaseq>MDAKKPYFIAIIIQVIYTGLFVVTKAAFNHGTNTFIFIFYRQAA ASLLLLPLAIILERKNAPPMSIRLFAKLFLYALLGNTISFNLYNTGLKYTSSTVASAA ASSVPVLTFFFAVLLRLEVIRLRRLSGVAKVAGVGLCLGGVLVIALYSGPALSPLNHH RAFGGGAESGSSGAATRARWVTGTLLMLLSNVTWSLWIVLMSPLLNEYPCKMLATALQ SLLSAAQSLVLAAAAAARNPAARRLRLDAGLLAVAYSAVAVTGVSYYLQAWCIQKKGP VFLAMSSPLSFVFTIFCSSFFLGEVVHLGSVVGGVLMVAGLYSVLWGKSKEHDTLTVA AGQQEEDAAAPPAAESSSSSDNESKHQQGRFASADQQV</aaseq>

Gene Sequence

<dnaseqindica>1..173#320..382#473..589#3479..4244#atggatgccaagaagccatatttcattgctatcatcatacaggtgatctacactggcctgttcgtcgtcaccaaggcagccttcaaccatgggacgaacaccttcatcttcatcttctaccgccaggcagctgcctctctcctgctgctgcctctcgccattattctcgaacggtaaccggtcgatcgatcaagaagagctatctaatctactatagctgtattgaaaatttgaaatattcttttttgggtcggttagcctgggtagctgataaaagagagattgagattctgctaaatttgagcttgctttcatgcaggaaaaatgcgccgccgatgtcgatccggctgtttgccaagcttttcttgtatgctctgcttgggtatgagtagacacagcagtacagcactgcaggcaggatttggatgggcaaacacgcgtgtcattaacttgggtttgatttgatttgcaggaacacaataagctttaacctgtacaacacgggcctcaagtacacttcgtcgacggtggcatcggcggcagccagctcggtgcccgtactgaccttcttcttcgcagtcctactaaggtgagcacgatctcatcgctgcatacttaatttgttgctgtttctttgtacaaagagaggggatcatatcctctcctagaaatgatagcataaacagattccagaatttacagaaaagaaagactctacttttgtaaatttgttagctgtttttttagaaagagatgggatcctctcccatttctatcagggcatgaatagcattgctagcctttctccgcattcatgataagctaacaatgctagtgttatggtactactcctaggtgtgttcttttaagggggttaaaaatactttctccttgcatgtaaaacagagtgacgaattaatgcataattaattaagtattagtttaaaaaattgaaaatggattattttgattttattaagcaacttttttatataatctttttttaaaaaacacaccgtttagtaatttaaaaagcgcgcgcgtgaaaaataagagggtagaacttgcgaatatggagtaaagaacacacctgagcagatgcttaatgcgtgttgtaagtttgtagtacagagtatagtcaccgattactgtgttcgttcggatgagaaagaaatctcttgtttttttggcacatatttcttaaattgttaaacattgtttttataaaaaaatataagaaggttattttaaaatatctatttttaagtctaaaataatcaatactcaattaatcatatgctaatagctcatgttgttttgttatcttgttgtcttttcttctccactcgaacacagtcctagaataaacataaatggaataattattaccctctccgtattttaatgtatgacactgttgacttttcgaccaatgtttgaccattcgttttattcaaaaattttgtgcaaatataaaaattatttatatcatgtttaaagaacatttgataaatcaagtcacaataaaataaataataattacataaattttttgaataagacgaatggtcaaacgttgagcaaaaagtcaacgacgtcatacattaaaattaaaatatggaggtagtaaaatagaagaggttcagaggttcagtgttggcaggcggagaaacaaacgcagtcgatgtacgggcagatccatgaccaaattaacgtggccaacagaatcttaatctcgcacgtgcgccgcatgtggccgttacatttcgatcagctgctctgctctcgtaggagcatcatgttttttccgtgctctctcagctctcaagttgtgcgctgcttcgctgccggcatagcaatatagcatcagcagctgctcgatgagatcgtctcaactgaaatccatcagcactgtattcttgcatatgcatatccgttcaaaaaaaaaaattcttgcatatgcatatgcacccacgcgtgcattggtcgatcatatcatgttggtccatggatccaaccttttcacgttgtatctatacaatatatagaaaacctcgtacaacacgttgtctatagtgtaatcaacgatttagttatataaacctcgtataacaagttgtctatagtataattaacaatttagttctagagatagtactatttatgtatttttaaatagatgaccctgttgatttttaaaataacgtgtgaccttctgtcttattaaaagatattgtaagtatgctaaaacatatcatacttaaaaatttctttaatgataaaataagttacaagaaaataaatggtgtttttatatttttttaataagttgaatagtcaaactttatatcaaaaatcaactactttattttttataaaacatagagagtatatgatattaagctatctatcatctctttttaaaaagggttgctaatgagcacacgacgtcctttattttgtctatcatcagtttcttggctccacatcatcaaaattattatgacattctctcctagtcctagacatcatattattgtcctagatggtgacatcatatcattattcatggatatactggtaaggtagcttaacaaagtttcaaaactaattgagaagaaagactatactttcctatcccttttagctgatttacggtggaaaccacattttaagtgaaaacttaaacactttatataacaattcttaaaagaagaatcaaacaagaacacatgtaggtaatatgcaaataaaaaaccttgcaaaattgtataaacaaactcaacttttaatgagatacaaaattaacaaaaaaaacactattcatgctgttgtcttttctcttttaatgatataaaagttttcaatcattttttttaaaaaatctagttttaatttttttataagaaaatattagacaaccatgcaaagttttaagtgtaaacccaatttcgtttgtgagatataaaattaagaaaaataagggaaaaagatttgctccccaacataaaagtacatatatttgctccggaatgtcctgctcacttaaaatgtagctgtatttacttagcggtcggccaacataataattagcccgccaaggacattccgttttcttgtagtgcatcgaggtaccggtacattatagtaccaaatcgtttccgatcgttggatctcaataccgtgaggtaccggtacctactttttgctggactagagtaaatctcatttatgtttgtagaacgataatattatcaacattggtatcacaaaactttagtattttaagatactttctagcgtaaaatttggtatctcgagggtactcagtaccttcaagtaccaaaattttttgtgcaaatatgctacctcgaggtttcaaatattggacggtaaaattgctagttgctaccgaaaaatgcatgcgcgcagttgatcgatctgatatgaatatatctgaatgcatgcatgtgtgcaggctggaagtgatccggctgaggcgcttgtcgggcgtggcgaaggtggccggagtggggctatgcctcggcggcgtgctggtgatcgcgctctactccgggccggcgttaagccccctgaaccaccaccgcgcgttcggcggcggcgcagagagcggaagcagtggcgcggcgacgagggcgaggtgggtgacggggacgctcctgatgctgctgtccaacgtgacgtggtcgctctggatcgtgctcatgtcgccgctgctcaacgagtacccctgcaagatgctggccacggcgctgcagtccctgctcagcgcggcgcagtcgctggtgctcgcggcggcggcggcggcgcggaacccggcggcgcggaggctgcggctcgacgccggcctcctcgccgtcgcctactccgccgtcgccgtcaccggggtctcctactacctccaggcgtggtgcatccagaagaaggggcccgtgttcctggccatgtccagcccgctcagcttcgtcttcaccatcttctgctcctccttcttcctcggcgaggtcgtccacctcggcagcgtcgtcggcggggtcctgatggtggccggcctctacagcgtgctctggggcaagagcaaggagcacgacacgctcacggtcgccgccggacagcaggaagaagacgctgctgcaccacccgctgcagagagcagcagcagcagtgacaatgagagcaaacaccagcaggggagatttgcgtcggcagatcaacaagtctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0207700, RefSeq:Os01g0207700