Os01g0217500

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Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0217500| Description = DJ-1 family protein| Version = NM_001048941.1 GI:115435295 GeneID:4324580| Length = 7082 bp| Definition = Oryza sat...")
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Gene Name

Os01g0217500

Description

DJ-1 family protein

Version

NM_001048941.1 GI:115435295 GeneID:4324580

Length

7082 bp

Definition

Oryza sativa Japonica Group Os01g0217500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6411766..6418847

Sequence Coding Region

6411879..6411911,6411981..6412190,6412282..6412431,6413767..6413949,6417685..6417759
,6417939..6418153,6418257..6418398,6418495..6418674

Expression

GEO Profiles:Os01g0217500

Genome Context

<gbrowseImage1> name=NC_008394:6411766..6418847 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6411766..6418847 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgcaggcgtctcctccaacgaagaaggtgttggtgccgatcgtcgccggcacggagccggtggaggcggcggtgcccatcgacgtcctccgccgcgccggcgcggacgtcaccgtggcttccgccgatgatggcgagctggtcgtcgaggtcatgtacggcgtcaggatcgtcgcggacgcgctcgtcgccggcggcgactgcgccgccgctcacttcgacctcatcgtcctcccgggaggggttccaggcgcggcgaacctcggcggctgcgcggcgctggaagccatggtgaggaggcacgcggcgaccggaggtctctacgccgccatctgcgccgcgccgccgctggcgctggcgtcctggggcatgctcaacggcctcaaggcaactgctcatccgctgttcgtggacaagttcccaccggaggtggccgccgtggatgcgagcgtggtggtggacgcgagcgccgtcacgagccgtggcccggcgacgtcgacggagttcgctctcgctctggtagagcaactctacagcaagaacaaggccgagcagatcgcaaaagaaatgcttgtcagatacgatgctgggtataccatcgatgaagtcaactcggttcaatggaaatgtaacggcacgcccaaggtccttgttccagtagccaatggcaccgaggagatggagctgataacaatcatcgacgtcctgcgcagagccgacgcggacgtcgtcgttgcgtcggcggaaaacgccggcgtcgagatcgtcgcgcgccacgggatgaggatcgtggctgacacgacgctggacgaggcggctgccgatgatcagacgagcagcttcgacctgatcatcctaccgggtggcacgcctggcgcgaagacgatgagcagcaacgagaagcttgtcactctactgaagaagcaggcggcggcgagcaagccctacggcgccattggcgccgcgacggctcatgtgctcgagccccacggtctgctcgagggcaagaaagcggcggatcaggatggcggcgacgagtgcgagagcagagtggtggttgatgggaacgtgatcacgagcggaggcaccggcaccgccatggagttcgccgtggccgccgtcgagaagctgctcggccgcgacgtggcgcagagggttgcggaaggcttgctttttgcctga</cdnaseq>

Protein Sequence

<aaseq>MAAQASPPTKKVLVPIVAGTEPVEAAVPIDVLRRAGADVTVASA DDGELVVEVMYGVRIVADALVAGGDCAAAHFDLIVLPGGVPGAANLGGCAALEAMVRR HAATGGLYAAICAAPPLALASWGMLNGLKATAHPLFVDKFPPEVAAVDASVVVDASAV TSRGPATSTEFALALVEQLYSKNKAEQIAKEMLVRYDAGYTIDEVNSVQWKCNGTPKV LVPVANGTEEMELITIIDVLRRADADVVVASAENAGVEIVARHGMRIVADTTLDEAAA DDQTSSFDLIILPGGTPGAKTMSSNEKLVTLLKKQAAASKPYGAIGAATAHVLEPHGL LEGKKAADQDGGDECESRVVVDGNVITSGGTGTAMEFAVAAVEKLLGRDVAQRVAEGL LFA</aaseq>

Gene Sequence

<dnaseqindica>114..146#216..425#517..666#2002..2184#5920..5994#6174..6388#6492..6633#6730..6909#agctcgttcaatgcgcccggtgtctcctcctcccaactacacacccccgcaatctcgctcgctagctcgctgatcgatcaagctcaagctcaagctagcttcggtcgtcggcaatggcggcgcaggcgtctcctccaacgaagaaggtaacatatgatgattatagtgtgtgcatgttcgcgcggagtgtttgattcgatcgtacgcgtgtgcaggtgttggtgccgatcgtcgccggcacggagccggtggaggcggcggtgcccatcgacgtcctccgccgcgccggcgcggacgtcaccgtggcttccgccgatgatggcgagctggtcgtcgaggtcatgtacggcgtcaggatcgtcgcggacgcgctcgtcgccggcggcgactgcgccgccgctcacttcgacctcatcgtcctcccggtacgtacaatatattgcggccaatggcgacaccgatggatgcggcatggaagaagctcatcttgaattctgcgagatatgccgcgcgcagggaggggttccaggcgcggcgaacctcggcggctgcgcggcgctggaagccatggtgaggaggcacgcggcgaccggaggtctctacgccgccatctgcgccgcgccgccgctggcgctggcgtcctggggcatgctcaacggcctcaaggttgctaaagctagcaagtggtcactccagtccactgctcactattgctattctccactatcacaattcactgcttaatttccagctggttttttttttctaaaattatactccctccattttaaaatgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaactaattatttattcttttcatatcattcgatttattgttaaatatacttttatgtacacatatagttttacatatttcacaaaaaaaaatttgaataagacgaacggtcaaacatatgttaaaaagtcaacggtgtcaaacattttgaaacggagggagtacataggtacttgagatatactccatccgtttcaggatataagacgttttaactttggtcaaagtcaatctgctttaagtttgatcaagtttgtagaaaaaagtagtagcattttcaacctaagataaatttattatgaaaatatattcaattattgattcaatgaaactaatttaatattataaatagtattatatttatctataagcttagttaaatttaaaacagtttaactttgattaaagtcaaaacgtcttataaactggaacggagggataagtatttaccacaaaacacatgtttaacagacgacctcaaagaaacgaagggtgtcggtaaatacctaatctcactaaatcatgtccataatttaaaacacatgtgtacgttttgacatggagtattttttaagaaaccgtatacttacataaaatacttcaccgattgatttacatgtattcaattagataaaaaatggttatggaaccaagtaacaaattaatgtttgttcaaaagattaaaaataccacatagtggaacattttgccattatctagaaaaatagaacattttgccataaaaggattcctcaaaataaattataataaacggtgtttgcgttttcctcattttatatatgaaatttactctacagagagagaaggcaccaaaactgtggtgcaaaaaggtttggggcatttgcaaatttgccaccggtttttaattttgcaacgatgccactcgaatgatagttctagtgatatttttataattttttagtggcagtcttgcaataacgattcaaaacagtggtaaaacagtggtaagtttgcaattggctcaaaggttttaaagttgagctatgatggtgtacgcacctacactcccagtaagctaattttgaaatacacaaaattaaccacaaatcgttaatttattaatcatgattcataaccgtcaaatatgatatgtctttgcatgatgaaggcaactgctcatccgctgttcgtggacaagttcccaccggaggtggccgccgtggatgcgagcgtggtggtggacgcgagcgccgtcacgagccgtggcccggcgacgtcgacggagttcgctctcgctctggtagagcaactctacagcaagaacaaggccgagcagatcgcaaaagaaatggtaattaattatatatatggttctactaactttggcacttgattaatagctacctaactccgtcttagagtatagcacttaaagatcggatgtctcatccaattttaaactgttagattgctatatattctagcacggaggtagtaaaatttctctcattggatcttacccattgttactcttgttgatttttttttaccatggcaagacctgtccattaattgtaaagattttgaaaaatgtttttgtttgaatttttatttttaaagtaagattggttaggctgctagctacttccttcatcttgcagtatcaggcttgtaagcatcttgatattcaacttttaaaattattgaccaacaataatcagtctaataaaagtcaaattttatttgatgagaataatataattggattgacatttaaatcccctttcctactatagttgtagaatatgataaactaaaagttaaagattagttttataaaccaagctaaatttgaccgcgtattatttggtgggaaaatggtgtggtacctcctatttttaatatatgatactattttcttttttgaaaaaaaattgaccaacaatatttatttatttagatctctgatcaaaagtactttgagcatggctagtatgtttgcctatttacataaatatttaaaagaaaataatagccaaacgaattagaataatcattttaaaagacaggtatttttagtttactatcaaatgggtgctaacattttcgacaaagttgtgtttggtatgttacctgaagtagtaaacgaccatggtccatggactatgccaaacttaactaaattacataatctggtaatctatatatttatataagcaagtatatatactctctatatataggtggaccaaatagactataattaagcttttttttaagagtatatggagtacatctgcccatgtacgtctatattcattattagttttttttagaagaaatgaactcgagaaatataggatactcccttcttgtaaaggaggtcgttttggacagcgacacggtctccaaaacataattttgacttcttatttctataaaaatatttattgacaagtgatatatatgtatacttttcaagacaaatctattcatataatttttacattttcaaacttaacaacttaagagttattcatgatttatacatctgcccatgtacgtattgtcggagatatgggcccggggatatgcgaagtgaggggagtttaccttcccatcctgtcgcgtgaccctacagcctggtcctacccccgcaccccgcgaatcgcaggagcggcccgaggggcctcggggtgccacgtcatgccccttgggccctcgcgtcgctttgccccgaggccctcgcccggctgccatctagcggggggagcaagcggggagggggcccaggctgaaccgcctttaatgcgcacaacgccccaactgccccttgcgggcagacgtgcggcgtgcccgactggcgtgcgtcagtcaagaatgaccggtccgtgaccagcctgtcgccggtcacgtctgactggacggacggccgtgcccccacgtcgcatctgtctccggcagagtggaggtaggtatgacccgtcccatcggagggtcattcggagctctctccacgagagagcggccaccacaagtcttcacccattaatgagggaatgacagggctgccccccgtgtcaggcgggggacggcgctggccccactcaagaacgagctgtggcttagcttccaggcgaaggcacgagtcgagatccggtcaaggtagggtgggtccccacccggtagaagagtaggtagaggcggtgcatgtggtatccccttgagctataaaaggaggaccttgcctaccgagaaaagggggacgactctcagaaaacctgggctctaggagaagaggaccgagaacgctctccggagtttaggaacctttgtaactcttaccctgaatcccacacacaggagtagggtattacacttcatagcggcccgaacctgtataatcttgtcgtgtacacgctgcctagcagccttcagggcggatacgtgatttctagagacgagctctttcccccggccgaactcacaaaaggggatcccacgatctcccgctagagaggtttacatgattagtttttttagaagaaatgaactcgagaaatataggatactcccttcgtacttgtaaaggaagtcgttttggacagcgacacggtctccaaaacacaattttgacttcttgtttctataaaaatatttattgacaagtgatatatgtatacttttcaagacaaatctattcatataatttttacattttcaaacttaacaacttaagagttattaatgatttatatttccaaggtttgacttaaacattattctaaacaactttttttacaagtacggaaggagtaattaggacacagttcctcgtttccaggaatgggtggcataatttatgaggaaatggacggtacattgcggcggtctaataattgtctaacgttgtattgaatgttcacttcacatgtgccgttgtcagctcaaaatcggttgtggaaagtcagggcaggaatttattgtctagataagcccccatggcctcatggtcatatgggccatatgccgatagctgttgatacttgatagtatgatggtgtgtgttgactgctgctatggtcatggggccaaatgtttctgaaatgcagtcagagaacttcatgagcactagaacggaatatactgaaaataaatactccatattttcccacctactccatataatacttattgggttgaaataaaattctatatggtcatacttggataatatgtcatactaatttgtatagtatttgcgatttcgttgctaaaaaaaccataggcgatccctgatgtgctctctttttttaaaaaaaaatcattgctaaaataagtgtggttaaattttaaatgtgaatatagtagttggattatttgagatcttcttttttttttagaaaatagattaaaacctggcctctatatctaacacagatgtacgcagctaaggtggattatttgtgaatgaaacatacatgacaaagttctgcaattgctctcttcaaaccctaaactcgtgctaatagttcattaagaaatgtactcccccatcccaaaatataagaatctagaaccggataagacattttttttatattttgggatgaagatagtatacattaatcttaaaagtagtcagtgtaccaagccagtctacttgatttgactatgataggacttttggagagtgtagtagtacttatataagagaaattttacggtcgttgagaaggtaccgatagtgtaaattttcataaattaattaacattggaaaatgttattgtaatatattgtggagcattcttttaaacaaagaaagtccataatacaagtgttgacaaataggtggaccagaaattaatcaacaaagttaccttgtccacggtcccacccatcaactacctaggactaggaagctggcatttgtaagcatggcagatttgagctctgctccttgactcatcactttatgaacagcaaatcatccccccccccccccccccgcttttgttgtttttactgtcatagcttgatcaacatatgagttaactccctatatcttgtgcctcaaattgtcagcttgtcagatacgatgctgggtataccatcgatgaagtcaactcggttcaatggaaatgtaacggcacgcccaaggtacatatacaagagatgaaacctaaacacttatcttaacactagctagcatttcatacctcataagtgatcgatggagctcttccaaatcaccatggagagaaaaaaaaaaggatagcatttcttatacaatataaaagccagaacttctctgaaaatttgcctctgttttgtgtcaggtccttgttccagtagccaatggcaccgaggagatggagctgataacaatcatcgacgtcctgcgcagagccgacgcggacgtcgtcgttgcgtcggcggaaaacgccggcgtcgagatcgtcgcgcgccacgggatgaggatcgtggctgacacgacgctggacgaggcggctgccgatgatcagacgagcagcttcgacctgatcatcctaccggcaagcagcatacacgaactctcgctgtccaaacccattttgatctgaacatgttcagatcactgaacgtctgaacactttctctcctcgtctcaaacaacagggtggcacgcctggcgcgaagacgatgagcagcaacgagaagcttgtcactctactgaagaagcaggcggcggcgagcaagccctacggcgccattggcgccgcgacggctcatgtgctcgagccccacggtctgctcgaggtaaattaaagaacattagacaagatcgcttgcttttgatcagtgatattctgtcgagacctgacacacatcgagcggccgcgcgattgatttcagggcaagaaagcggcggatcaggatggcggcgacgagtgcgagagcagagtggtggttgatgggaacgtgatcacgagcggaggcaccggcaccgccatggagttcgccgtggccgccgtcgagaagctgctcggccgcgacgtggcgcagagggttgcggaaggcttgctttttgcctgatcgatcttctgttggttttaggtgatcaaaccaatgaaagttttcataatgcagatgtgtgatctgtgaaagagataattttccttccaagaaaaagacataaagagttgtcatttgtcaaaccatcaacatttgttctcccataaacttataagggtgttttcttaatttat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0217500, RefSeq:Os01g0217500