Os01g0219200

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Revision as of 04:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0219200| Description = Conserved hypothetical protein| Version = NM_001048953.1 GI:115435319 GeneID:4324638| Length = 3049 bp| Definition ...")
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Gene Name

Os01g0219200

Description

Conserved hypothetical protein

Version

NM_001048953.1 GI:115435319 GeneID:4324638

Length

3049 bp

Definition

Oryza sativa Japonica Group Os01g0219200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6527777..6530825

Sequence Coding Region

6527798..6528198,6529260..6529480,6529568..6529612,6529702..6529869,6529984..6530031
,6530122..6530292,6530415..6530528,6530618..6530703

Expression

GEO Profiles:Os01g0219200

Genome Context

<gbrowseImage1> name=NC_008394:6527777..6530825 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6527777..6530825 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaaagcgatctcccttctccggccaccgcgagagccacagccacgagagagcgagggcgagggcgagagggggaggatgatggagctgaggaagcgcccgaggccgcggcgcgtcgaccccgacttcgtctcgtcaccgccggcttcgctgctgctgccgccgccgaggaagcgggcgaggaggcaggccgcgccgccggcggctccggctccggctcctgctcctgcgcgcccatcaccagcggcgaggaggcggccgacgtgcgcgcgggtgatcatccagagccccgtcgctgggcttcagccatccgtgtgctgcccgtgcgaggcgccgctccgggcgtgcaggcttccgcgcgcctccttcctcgctcgccgtcgccctcccttcgactggtacgaggcggacatgtggacggaggtggccaagtacctgttcggcgcggagctggtgcgcctctcctccacctgccgctggttccgccgcctcctcgccgacgagttcatctggcgccacgccttcctccgcgacctctccctcctccccgccgccgccgaccggtaccctccccgcccgctccaccgctcctggcgcctcctctacgccgccgccttcaacggcgcccactcgtactggttccgccggagcagcaggcacattggggcgtaccggattggtgggttcctgctcgagtcgccttacatgctcctgacggcgaagctggcggtgccgcagtggctgccgccgcaggaggacggcccgcagatcgccatcgagatgaccggcgcgtgcgtgctccccaacgcgcgccctggcatctggatcaccgacttccatcttgtgaggtgtcccaattgcaccctcaacaagtgcgcaggggtcctgcaggttctggacgcgcgacactgcgagctgttcctggagcagggattctggaatggcacctgggagtacgaggacctgggcgaccactacaacgacgaggagacccccaccgcagcctgcgccatcttcaacgccagcacccgcgctcatgagtccatttcatgtgttctccactcgaagtcttgggtcaggagatgcgacgacccacagcccaaggcacattgccgcccatacgctgttgccctcaattccaacctcctgtccaactccaaccaggggttggtgtcaaggttccaggcgatgcgagacacgaccgggaacgggcagatagtgtctatccggatcatacagcagatttactga</cdnaseq>

Protein Sequence

<aaseq>MGKAISLLRPPREPQPRESEGEGERGRMMELRKRPRPRRVDPDF VSSPPASLLLPPPRKRARRQAAPPAAPAPAPAPARPSPAARRRPTCARVIIQSPVAGL QPSVCCPCEAPLRACRLPRASFLARRRPPFDWYEADMWTEVAKYLFGAELVRLSSTCR WFRRLLADEFIWRHAFLRDLSLLPAAADRYPPRPLHRSWRLLYAAAFNGAHSYWFRRS SRHIGAYRIGGFLLESPYMLLTAKLAVPQWLPPQEDGPQIAIEMTGACVLPNARPGIW ITDFHLVRCPNCTLNKCAGVLQVLDARHCELFLEQGFWNGTWEYEDLGDHYNDEETPT AACAIFNASTRAHESISCVLHSKSWVRRCDDPQPKAHCRPYAVALNSNLLSNSNQGLV SRFQAMRDTTGNGQIVSIRIIQQIY</aaseq>

Gene Sequence

<dnaseqindica>22..422#1484..1704#1792..1836#1926..2093#2208..2255#2346..2516#2639..2752#2842..2927#acacgtcgcccccatcgctgcatgggcaaagcgatctcccttctccggccaccgcgagagccacagccacgagagagcgagggcgagggcgagagggggaggatgatggagctgaggaagcgcccgaggccgcggcgcgtcgaccccgacttcgtctcgtcaccgccggcttcgctgctgctgccgccgccgaggaagcgggcgaggaggcaggccgcgccgccggcggctccggctccggctcctgctcctgcgcgcccatcaccagcggcgaggaggcggccgacgtgcgcgcgggtgatcatccagagccccgtcgctgggcttcagccatccgtgtgctgcccgtgcgaggcgccgctccgggcgtgcaggcttccgcgcgcctccttcctcgctcgccgtcgccctcccttcgactggtaagtgattcgctctgctccctgtgcgtgcgtgcgtggcttcgagttcgaggtggcgaattttgaaattggttcggattctgcttgcgttgttcttaatctagtgtggtttcgatgtgcgcgtgtgtttctggaagttccgtggattggaggaagggaattggtttgaactaacttggagttcctcgggttggatttgagcatctgtgatgaagcagtggagaatcgcctcatgaattgcttgtctgtgtttgcattgcggtgatttgaaccttgctgctgtgatttcagtttggttattaggtgatcgcaacataacccactgaatcagttctgatgctgctgtttgaatcctctagctctggattgtgggttaactcttccattctgtcgcatttggccatctgaattgcctgttctgtttgcgtttctgcattgcattatgtgaatgttgctgtgaactcaacttgatttgaagcgatcgatcgtggtcacaacttaatccacctgttgctgtttgaattttctagctctagattgtggcttaatgcttccatttgcgtcctgctcctaatcagctacctgccgctggacgtgggtggcttgaagcttcgagaattcgaattttgttgcgttgaaatgctgcacttaacttttgaacaaccggtgcgaagtgcactggaaatcctctgctgagcgcttttggttagaaatttagaattgctatgcacgttcgagtgttttggtacttggattggatgaaattctgtatcattcgttattcttctggattcaaattcgtaggagcagagtgctggttaatgcgaacaggaacttctgcgtgctcgaatgatggttgctgacttgcttctatgctttccaatttgtgaattcgttgtttacattttctgggacttgcccagatgcactgcagaattttttaatccagccacctgcagttttgagcattgctcctcctgctaagttcatttttccagaaatctatcgtcaaatcctacttcgaatttgaattcaggagttcttttgctctgttgttgcaggtacgaggcggacatgtggacggaggtggccaagtacctgttcggcgcggagctggtgcgcctctcctccacctgccgctggttccgccgcctcctcgccgacgagttcatctggcgccacgccttcctccgcgacctctccctcctccccgccgccgccgaccggtaccctccccgcccgctccaccgctcctggcgcctcctctacgccgccgccttcagtaagctcctcccctccctccctccctccactgacgacccggtcccactcactgacatgacacgtgtcccctctcttcttcctccagacggcgcccactcgtactggttccgccggagcagcaggcacattggtaagcgcagcgcaacgacgtcgtcgaaatcgtttgatctctctccgctccgcttcttctgattgattcgtgtggtatacgtgacgcaggggcgtaccggattggtgggttcctgctcgagtcgccttacatgctcctgacggcgaagctggcggtgccgcagtggctgccgccgcaggaggacggcccgcagatcgccatcgagatgaccggcgcgtgcgtgctccccaacgcgcgccctggcatctggatcaccggtacgcgcgcccatctcatcgccacccaattcctcgcaagcttacagttctggttaattaaactgtttcgatgatctcactcgcattgcttttggccttgttgaaatcttgcagacttccatcttgtgaggtgtcccaattgcaccctcaacaagtgcgcaggtgagtcgagagactctgggggttttttgatcctgccatcgtggagtttgattgctcactgaatttggttgggtgcaatgggtggttcaggggtcctgcaggttctggacgcgcgacactgcgagctgttcctggagcagggattctggaatggcacctgggagtacgaggacctgggcgaccactacaacgacgaggagacccccaccgcagcctgcgccatcttcaacgccagcacccgcgctcatgagtccatttcatgttcgtccctggatcatttggcatttgtcaattccagttctctgttcatttacattcttggtacaaggatggcacactctcacaacgactgacatgggtggcatcttcttcttccggtgcaggtgttctccactcgaagtcttgggtcaggagatgcgacgacccacagcccaaggcacattgccgcccatacgctgttgccctcaattccaacctcctgtccaactccaaccagggtatgcacgtgaactaaatcaaacatttctttctgtctcaagtctagttctgatctgatattctttgcattgtgtggattggattgcagggttggtgtcaaggttccaggcgatgcgagacacgaccgggaacgggcagatagtgtctatccggatcatacagcagatttactgattcaagtgcctggttcgtttctggtgctgggttcctgctctgttgtttaatgtgttaatgccttgtttgcgatgatataagttctgtcagggataaatcatgagagggagtacagttatact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0219200, RefSeq:Os01g0219200