Os01g0223600

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Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0223600| Description = Similar to Pto kinase interactor 1-like protein| Version = NM_001048981.1 GI:115435375 GeneID:4326708| Length = 3009...")
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Gene Name

Os01g0223600

Description

Similar to Pto kinase interactor 1-like protein

Version

NM_001048981.1 GI:115435375 GeneID:4326708

Length

3009 bp

Definition

Oryza sativa Japonica Group Os01g0223600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6765491..6768499

Sequence Coding Region

6765741..6766393,6767673..6768498

Expression

GEO Profiles:Os01g0223600

Genome Context

<gbrowseImage1> name=NC_008394:6765491..6768499 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6765491..6768499 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgttcaacgggttcaatggcaccctccccgccgcgctctccaacctcacccagctcgtcgcgctcaacctctccaacaactccctctccggccgcgtcccggacctcggcctcccggcgctccagttcttgaatctgtccaacaaccatctcgacggccccgtgcccacctcgttgctgaggttcaacgacaccgcgttcgccgggaacaacgtgacgcggccggcgtcggcgtcgccagcggggacgccgccctcggggtctcctgcggcggccggcgcgccggcgaagaggcgggtgcggctcagccaggcggccatcctcgccattgtcgtcggcgggtgcgtcgcggtgtccgcggtcatcgccgtcttcctgattgcgttctgcaacaggagcggcggcggcggcgacgaggaggtgagccgcgtcgtgtccggcaagagcggggagaagaaggggagggagtcgccggagtccaaggcggtgataggcaaggccggggacgggaaccggatcgtgttcttcgagggcccggcattggcgttcgatttggaggacctgctccgcgcttccgccgaggttcttgggaagggcgcgttcggcacggcgtaccgggcggtgctggaggacgccaccacggtggtggtgaagaggctcaaggaggtgagcgccgggcgccgcgacttcgagcagcagatggagctcgtcggccggattcggcatgccaatgtggcggagctccgggcatactactactccaaggacgagaagctgcttgtctacgatttctatagccggggaagcgtatccaacatgcttcacggaaagagaggggaggacagaacacctttgaactgggaaaccagggtaaggatagccctgggagcagcaagagggattgcacacattcacactgagaacaatgggaaatttgttcacggcaacatcaaggcctcaaatgtcttcctgaacaaccagcaatatggctgtgtctccgacctcggcttggcatcgctgatgaacccaatcaccgcaaggtcccgttctctgggatattgtgcaccagaggtcacagattcgaggaaagcatcgcaatgttcagatgtctacagctttggtgtcttcatacttgagctcctgaccgggagatcacctgttcagatcactggtgggggcaatgaggttgttcaccttgtcagatgggtgcaatctgttgtccgggaggagtggactgccgaggtgtttgacgtcgagctgatgaggtaccccaacatcgaggaggagatggtggagatgctccagatcgccatggcatgcgtctcaaggaccccagaacggcggcctaagatgtcggacgtggtgaggatgcttgaagatgtgcggaggaccgataccgggacgcggacctcgacggaggcatccactccggtggtggatgttcagaacaaggcagagagctcatctgccgctcactga</cdnaseq>

Protein Sequence

<aaseq>SFNGFNGTLPAALSNLTQLVALNLSNNSLSGRVPDLGLPALQFL NLSNNHLDGPVPTSLLRFNDTAFAGNNVTRPASASPAGTPPSGSPAAAGAPAKRRVRL SQAAILAIVVGGCVAVSAVIAVFLIAFCNRSGGGGDEEVSRVVSGKSGEKKGRESPES KAVIGKAGDGNRIVFFEGPALAFDLEDLLRASAEVLGKGAFGTAYRAVLEDATTVVVK RLKEVSAGRRDFEQQMELVGRIRHANVAELRAYYYSKDEKLLVYDFYSRGSVSNMLHG KRGEDRTPLNWETRVRIALGAARGIAHIHTENNGKFVHGNIKASNVFLNNQQYGCVSD LGLASLMNPITARSRSLGYCAPEVTDSRKASQCSDVYSFGVFILELLTGRSPVQITGG GNEVVHLVRWVQSVVREEWTAEVFDVELMRYPNIEEEMVEMLQIAMACVSRTPERRPK MSDVVRMLEDVRRTDTGTRTSTEASTPVVDVQNKAESSSAAH</aaseq>

Gene Sequence

<dnaseqindica>2107..2759#2..827#ctcgttcaacgggttcaatggcaccctccccgccgcgctctccaacctcacccagctcgtcgcgctcaacctctccaacaactccctctccggccgcgtcccggacctcggcctcccggcgctccagttcttgaatctgtccaacaaccatctcgacggccccgtgcccacctcgttgctgaggttcaacgacaccgcgttcgccgggaacaacgtgacgcggccggcgtcggcgtcgccagcggggacgccgccctcggggtctcctgcggcggccggcgcgccggcgaagaggcgggtgcggctcagccaggcggccatcctcgccattgtcgtcggcgggtgcgtcgcggtgtccgcggtcatcgccgtcttcctgattgcgttctgcaacaggagcggcggcggcggcgacgaggaggtgagccgcgtcgtgtccggcaagagcggggagaagaaggggagggagtcgccggagtccaaggcggtgataggcaaggccggggacgggaaccggatcgtgttcttcgagggcccggcattggcgttcgatttggaggacctgctccgcgcttccgccgaggttcttgggaagggcgcgttcggcacggcgtaccgggcggtgctggaggacgccaccacggtggtggtgaagaggctcaaggaggtgagcgccgggcgccgcgacttcgagcagcagatggagctcgtcggccggattcggcatgccaatgtggcggagctccgggcatactactactccaaggacgagaagctgcttgtctacgatttctatagccggggaagcgtatccaacatgcttcacggtatggctcttgctcttgttcttgctgtcattttctaaccggaggggaaacctcaaaccccccaggttcacttctcataacaatcctggatgtcacaatcatcatatcaatgctaaattgtacattgcaattaatttactgttgtattttattgatgtcattctcggtcaataggtctaattgttaactggcgatgataatgataggtgtgatattcaagaacctgcttttctaggatttagaaggtgccacgataagttagaagaaaaattgagatgtcgtaattcagaaggaaaatgatttgtaatgtgatggcttagatatatgaggttgcttgtcttttgggaaggtgatggaagttagataagttagctatacttgtttaattagaggcaggaaacttctgttgattgaatggtagggtggacaattttggatgtatttcataattgaactagtgaagtatatagggtacaaaatactcgacaggtccttgtcttggtacggggctgcattattttgagttttctacctgagaacttgagacctttgacttgcgatatttaggggtaaaacccagtttacatttggtcaatttggttctctttctatatatactttcttgtctgctttgattttaaccttttatttcagtataaatgtgaattatcctctttcactcttgctgaatatgccactcgggacttctttacctttctaattgggccaattttgatgtcccgttcatgttttactttaagtggtatatagttctaatatctctagtgcctatatgcagccatgtgaaattagaaccttctaaatttatattccttgttttggatttctgtcttaaacttgccatgctcattgagaatgagctgattggtaagcttatattttataaggctccaccattgctcttagctgtattcacttgcaatcttgcatgtggagccagttcaattcaagttcacatggcatgcttggtatggtcaactggtcatgtcaaggccagaatggtagcattacaatatatttccttagatgcggcatcttattgcagataaatgaccgaattcctaaattcagatacaatatttcatcaacaaaataaaaaacacatgaatttttctgtgatccgctgtagtaatgttggtatgtttttcttcatctgaaatggatcaggataaattagcaagataacccaattgtatttattctacccataattgaatgtgatgttcagatcgtaaccatctctttttgccccacgcaggaaagagaggggaggacagaacacctttgaactgggaaaccagggtaaggatagccctgggagcagcaagagggattgcacacattcacactgagaacaatgggaaatttgttcacggcaacatcaaggcctcaaatgtcttcctgaacaaccagcaatatggctgtgtctccgacctcggcttggcatcgctgatgaacccaatcaccgcaaggtcccgttctctgggatattgtgcaccagaggtcacagattcgaggaaagcatcgcaatgttcagatgtctacagctttggtgtcttcatacttgagctcctgaccgggagatcacctgttcagatcactggtgggggcaatgaggttgttcaccttgtcagatgggtgcaatctgttgtccgggaggagtggactgccgaggtgtttgacgtcgagctgatgaggtaccccaacatcgaggaggagatggtggagatgctccagatcgccatggcatgcgtctcaaggaccccagaacggcggcctaagatgtcggacgtggtgaggatgcttgaagatgtgcggaggaccgataccgggacgcggacctcgacggaggcatccactccggtggtggatgttcagaacaaggcagagagctcatctgccgctcactgaacctcactcgttggaagctgccccctagtttatcatgttgtttgtcttaccaggtagggaactaggggaatgaatcctgtgttttgacagtactgcttgcctgcatgatgatgattcttttgtcgtaagagattacatgttacaaaattgtaacgccttgtggacagagcttgcttattcagcatttgctcactgctgatctgtaagcaaagaacagcacctgctctctgaattattcttggatagtatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0223600, RefSeq:Os01g0223600