Os01g0226500

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Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0226500| Description = Conserved hypothetical protein| Version = NM_001049000.1 GI:115435413 GeneID:4326744| Length = 6105 bp| Definition ...")
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Gene Name

Os01g0226500

Description

Conserved hypothetical protein

Version

NM_001049000.1 GI:115435413 GeneID:4326744

Length

6105 bp

Definition

Oryza sativa Japonica Group Os01g0226500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6978596..6984700

Sequence Coding Region

6978849..6979033,6979163..6979538,6979631..6979714,6979818..6979883,6980383..6980453
,6981311..6981698,6982094..6982134,6982641..6982737

Expression

GEO Profiles:Os01g0226500

Genome Context

<gbrowseImage1> name=NC_008394:6978596..6984700 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6978596..6984700 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttccgaccaccgggtgctttcggggtcgcacccccgccgccgccgccgcagcagcagcagcatcagccatggcagtggcagccgcctttccagccgccggccgctacatccttttggcagcgggacaatgtgcgggagcatgtggggaggctgcaggaaaccatcgaattagccactgcagtgataaatgagctcgaggaaattgcgcaggctagaaactcggtcgatgctagcacgcaaggacctgactcgtcttcagcaaaattgtcatcagagcctgatggttcttctgcagataggccccggcatttcgttgagcttgctagagctatgaagattagtcaagacactcatgagtctctggccacagatgctgctaattatctttgttctcagattcagaaccttcttgcacctatttatcctgctgtgaaccaagggggtccttgggaagagaggtatgcaatgattaggttagctcagaagctgcagaaatccaagagaaataagcgatggagaaagagaaaaagaaagcatgttgcagagcttttccagaaggagcatgcagattatgacagaattgatcaggaagctgatgaatggagggctaggcaaatagccaaggacatggcgcagcgcaaggtggaaaacatgaagcagattgccaagaaaaaagcaaatgaggaaagaaagcgtctagaatctgagcttgagcttgccctaatggtcgagaaactacaggagcttcgctctatgagagttcaaaaaatgaagaaacaaggtcattttctgccagaagaagatgataaatatcttgagcgtgttaaggctgcagttgaggaagaggagcgccaagctgcaagtgctgctcggactgatgctgccaaggatgctattctgaccgcggaagagtcgaggaaggctgtgcagtgttcaaattcaagagaagatgattctgatcaagccaaaagtgcaccaacactggaacaaaaccagagagatccaggaataagcggcagaaatcatcatgcaagccaaaaaacagagcatgaacttcataaagatgacagcaaagggcatgggcattatgattctgtttccagtctgccttttgagttctaccattattatcatggaagcagctacgacatgggaacactcattgaggtccgcaggatgtgggattcctttattagagctggaggaagccgaatacctgggcactgggttcagccaccccctccagctgatgaagtatgggcatcctatttagtgcagcccaactgtccaagtaactccacttag</cdnaseq>

Protein Sequence

<aaseq>MFRPPGAFGVAPPPPPPQQQQHQPWQWQPPFQPPAATSFWQRDN VREHVGRLQETIELATAVINELEEIAQARNSVDASTQGPDSSSAKLSSEPDGSSADRP RHFVELARAMKISQDTHESLATDAANYLCSQIQNLLAPIYPAVNQGGPWEERYAMIRL AQKLQKSKRNKRWRKRKRKHVAELFQKEHADYDRIDQEADEWRARQIAKDMAQRKVEN MKQIAKKKANEERKRLESELELALMVEKLQELRSMRVQKMKKQGHFLPEEDDKYLERV KAAVEEEERQAASAARTDAAKDAILTAEESRKAVQCSNSREDDSDQAKSAPTLEQNQR DPGISGRNHHASQKTEHELHKDDSKGHGHYDSVSSLPFEFYHYYHGSSYDMGTLIEVR RMWDSFIRAGGSRIPGHWVQPPPPADEVWASYLVQPNCPSNST</aaseq>

Gene Sequence

<dnaseqindica>254..438#568..943#1036..1119#1223..1288#1788..1858#2716..3103#3499..3539#4046..4142#ctcctcctcccctctccctccgctccggcggagcgccgcgaaacgcccgccgcaaccgagcccaccgtcgaggcgatcggcggcggaggcgagggccgccgccttccgtcgcaggggtcaccttcttcgtcctcccccggtctccccctggtaagactcgatttcccctgagcctgattccgcccgttcctcgcctcaactgcagcgtggtgaactgacctaagggaggggattttgagggaagctgcccgccatgttccgaccaccgggtgctttcggggtcgcacccccgccgccgccgccgcagcagcagcagcatcagccatggcagtggcagccgcctttccagccgccggccgctacatccttttggcagcgggacaatgtgcgggagcatgtggggaggctgcaggaaaccatcgaattagccactgcagtgtgagttcctgaaccgcctaaagctagcgataatcatgcaactttgtctcaaaaccgaaggcatttcctttattgctaatttattagaccttttttttttgtggactgaaaatggaattgaattggcaggataaatgagctcgaggaaattgcgcaggctagaaactcggtcgatgctagcacgcaaggacctgactcgtcttcagcaaaattgtcatcagagcctgatggttcttctgcagataggccccggcatttcgttgagcttgctagagctatgaagattagtcaagacactcatgagtctctggccacagatgctgctaattatctttgttctcagattcagaaccttcttgcacctatttatcctgctgtgaaccaagggggtccttgggaagagaggtatgcaatgattaggttagctcagaagctgcagaaatccaagagaaataagcgatggagaaagagaaaaagaaagcatgttgcagagcttttccagaaggtgcgctcatcaatacgtttttctgtttatattgtgatcaaatcaaagtgacaactgaccataatgacatcaattgtcttgatgtttcacaggagcatgcagattatgacagaattgatcaggaagctgatgaatggagggctaggcaaatagccaaggacatggcgcagcgcaaggttctttctcatttttgaatttgtcattttgttagtggggttgttttgggtaagatacactgttgctccacagatgatcaattcattgatactgtgaaatcaggtggaaaacatgaagcagattgccaagaaaaaagcaaatgaggaaagaaagcgtctagaatctgaggtaaagttaatgcttacattgtggtgtggaaatcctgcttgtctgtggacatctgcgtggaaattgtgagcgctatgtttcattaattcattttcatacactgctgaattactatacattgtgataccttgagttatgaattttgttaagttgtagtaagcattaagttacaccattttttatctttgaccttatctgattttctacgaatttaggaaactctataagcttgcttctaaaatttcttaaagtcttgtatatttgtgtttgatatgctgcaacccaacatcttcaattacaccacctacctacctgttttctttcattcagaattattgtgcaatcagtttgtgaattcttgagtggttatttcagtatgttatatttagattccaaactattaatattctctgtagaaattgtaaattcaagagcggcaaatacaatagtcttgttttctagaaaactaattttctcaatacaaatcttctattttcagcttgagcttgccctaatggtcgagaaactacaggagcttcgctctatgagagttcaaaaaatgaagaaacaaggcaggatatattcatctacccattatttttaagaatttccttctttttatttatttcaatatatgagtccgtcaaacctatagtcataatctaaagaggtgcaaaatgtgggaaatggttaatacatgggggtcaatcttactgtaatgggtcaatcacattgtaatgcttcaagaatttgtcccttgtttaaatgattgccaaattttggcattcccattcttctctgtcatatctaatgcatttcttgccaatctgttgtccaaatgggtggtgtctgaaaacttcacaaaaatatttgctataaaattatggtaggctcgcgcgaacacactaaggccctgtttgtttcagcttatgattattataatctagattattaagccagattactataagctggattataataagctggcatagaataagctgtgagttgtttgtttgtctggattattgaaggcatggattattgggtttgaaaggctaaagtctataatgccctcagctatctgttcggttgatggcataggtgagtaatttttctcaagtatgtaggggtagtgggtctttagccactcaataatctgaaaaaagctcctctagagcagcttatcagattataataatctggcttatagattataataatctgctataattatctacttgtttgtttcagcttactcctaataagctagattataataatcctaagctgaatcaaacagggcctaaaatcacctgcaaactttgccttttccttgttaatagttatttttttcccctgttttagtacagttgatcaacctaaacacatggaactgatgcatgagttaccatgtaatatatttcaggtcattttctgccagaagaagatgataaatatcttgagcgtgttaaggctgcagttgaggaagaggagcgccaagctgcaagtgctgctcggactgatgctgccaaggatgctattctgaccgcggaagagtcgaggaaggctgtgcagtgttcaaattcaagagaagatgattctgatcaagccaaaagtgcaccaacactggaacaaaaccagagagatccaggaataagcggcagaaatcatcatgcaagccaaaaaacagagcatgaacttcataaagatgacagcaaagggcatgggcattatgattctgtttccagtctgccttttgagttctaccattattatcatggaagcagctacgacatgggaacactcattgaggtaacttatgctggcttttcaacttcatgctaccattaaggttttgtggagtgtataagaataatacagtgtaaatttgaactaggctttgcactatcagtctatcacagccaaaattctgaactaggctttacatatcaatctatcagagtcatagatatggcatggcgggtttcacacttccattgaataccataattggctcatctgggagttttgcgaatgctttatgtgttaatcagttaatgtgatttctaccaagtgaatgttttaggatgatcctatcgatggtctcatatcaatgcaaatgtgcaattactcaatatgttttttgattgggaattactcaatagattcactcagccatcatgtatgtattccacctttgattgcaggtccgcaggatgtgggattcctttattagagctggaggaaggtatgactttcactctgctaaatataatatgcaaactaaattcgctcaacaagcatctttgccatacaacaaaaaacaatggaaatatattttgctgattctctgaagaactaataccaagatgagaaaaaaagaactcatgagaatatataatgttctattgatttgggttatatatgaggtttatgccataggaaagtgcaatctcttttagtaaacagaatgatggttgttggatacattcgaagtttgttgggctacttgtatagtactctggaacgctttcttgtaatttcagtactgggatagcattatagtgctgaatgtcctgtggttctttcaagccatctactaataacttatggtagcattcatgttattttattgaagtgctctgatgataggatttagtacattgtgctctcgattgtagtgctttaccatgtgaaacgaattctatgtagcattctcttatttaacaatgcaattgtctcacctgcctgcagccgaatacctgggcactgggttcagccaccccctccagctgatgaagtatgggcatcctatttagtgcagcccaactgtccaagtaactccacttagctgtaatgaatttaatcttcttctgcctaaccactggaagttttcaaggttatcacaaggcaagtaggtgtttgagttgctactttttccccttcatgtcaactattaatgcagaaatttgatttaatatgtagccaattgcattgatgaaaattaaattgactaagcaaagttcaattgcttgcactatgaaccctcagttaaacacttaattatcttatggtttcacatgagttatccaatataaggccctgtgagtttcttcaccagcataaacactaaaaaaaatattacgaagaaattgtgttccggtctatgctttttccaggatgtctttttgcacatccatgatacgctccacttatggtctgaaaattttaatcaattttgttgactgtggggcaagattgatactgtcagtgacccagtcctgaacttctgataagtgataaccacttctgcagtcttgagtcaccattgtagttcaaatgtgttgctttgtaagttctatgtaatcaagtactaaacattggaaacaccattaaacttctttgccttctctaaagagaacttattgtagttcatgccaaggaccaaattggatgtatacaattcagccttgcgaactcgttttatattcggaatcaagaaaaaatgaagaaaaatgctagaatgggcatcccttttctgataatggtatgcagacatggtggaggcttttctatgtgatgattactggccacaggtccttttctgatctgttgagtagttcatgacaactaccagatcgtgactcaaaatcaatgggattttacatattagatcaaccagtgttgttcctatccactgctctaattgttacgaatgcatggagacatcatgttatacttatgtacccatctgttcttatggtgttgaactgaacgtacaaaactattgtaggctgttgcttagactgtaagctatatattcaacaggctggtgatataccttgaataaatgttaggaatcgtttgcccccttcctaatgatattccatagtaacctgcatcatgaatcaccacctgagaaatgaatagcttagcatatgagctataatgtttcagcatttgatcaaactcccagttcagcccaagattatcttgaaatctaaaacactgttgtatgaaaattacatattcataacataaccttagtattaattatagttatagtgtttattcagttagtaccacaataccagttaaattttaccctatatatctctttaatatgaggttttcattgaatatttatctacgatgcaatcggtcctgagagcactttaaaaaaatatatatgttctactttgtttaaagtttctgagaagctttgtgtttgttggatcagataccctggtgaagatttaaaccgaggaatgttttggattcaattttctgagtaagataggactaagaagtggaccggcaaatctagacttggaactgtatctagcaatagtcaacagatacgagcaaataacttcataacatgatagcttagatgaatagcggatttgttctttagcttatcatttcaatacattttattcatactgagtgcttgaccatttctatctccatgcattacttttccagcagctgcattttgggactattggttaggacttcagcttttcccctatgatgagccatatagatggccccgagaaaaagatggccaacgaaaaaatcgtggacaccattaggagaaaacaagaggttagtgaattggatggcattagcacccagtactatatatctctataatagagtaataaggacacggcataatgcctgctgcctttcttgttgtgcttgcttgctcctcccattttcttatctctttgaggtgattagtgattacacagaccaacaactgaatcctaaagctcgtaatgacaaatttgatgatacttgcaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0226500, RefSeq:Os01g0226500