Os01g0231500

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Revision as of 04:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0231500| Description = Similar to Casein kinase I (Fragment)| Version = NM_001049031.1 GI:115435475 GeneID:4325891| Length = 5924 bp| Defi...")
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Gene Name

Os01g0231500

Description

Similar to Casein kinase I (Fragment)

Version

NM_001049031.1 GI:115435475 GeneID:4325891

Length

5924 bp

Definition

Oryza sativa Japonica Group Os01g0231500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7264266..7270189

Sequence Coding Region

7264478..7264553,7264685..7264725,7265319..7265388,7265480..7265628,7266123..7266218
,7266306..7266376,7266490..7266551,7266631..7266694,7267588..7267672
,7267757..7267883,7267996..7268060,7268719..7268776,7268907..7269046
,7269604..7269792

Expression

GEO Profiles:Os01g0231500

Genome Context

<gbrowseImage1> name=NC_008394:7264266..7270189 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7264266..7270189 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccgcatcgtcggcggcaagttcaagctcggccggaagatcgggtgcggctccttcggggagatctacctcgccacgcacgtggacacctacgagatcgcggcggtgaagattgagagtagcaagacgaagcatccccagctgttttatgaggcgaagctctacaacgctctccaaggaggaagtggcattgcgaatgttaagtggtgtggtgtagatggagaggaaaatgtcctcgtcatcgatttgcttgggccgagcttagaggatctgtttgtctattgcggcaggaaattcactctgaagacagttctaatgttagcagaccagatgattactagaattgagtttatgcattccaaaggatacttgcacagagatataaagcctgacaactttctgatgggcctcggtcggaaagcaaatcaggtatacataattgattttggacttgcaaaaagataccgggattccactacaaatcgtcatatcccttatagagaaaataagaacctgactggcactgcacgctatgcaagttgcaacactcatcttggggttgaacaaagtcggcgggatgatttagaatctcttggttatgttcttctatattttctccgaggaagcctcccgtggcagggacttaaagctgcaacaaagaagcagaagtatgacaagatatgtgagaagaagatttcaacacctatcgaggtgttatgcaaatcctgtccagtggaatttgcttcttacttccactactgtcattccttgacatttgatcaacgacctgattatgcctttgtgaagcgccttctccgtgacttgtttacgcggcaagtctatgagtttgattatgtcttcgactggactgtgttgagatataaacaaggccaaaaggttcagcatggttccggagcgactattacaagagcaacccctggggaccttgacaaaacagcaggtgtaaatggtgctttccctcataatgaagcccgggagcaaacagggccaagccatctggcagggtcagctgcacaattgcaggtgaaacggtcaactgagagaggtccccaccctaacattcagcatactgagaatattacacaagacatgactgccagaaagcatctcgccgcatctgttttacctggtgccgaatggagaaaagatggtaactcaaggcaactagggcagcttgatgctttacatcagaagcagagttttgtcagcaatactggctcatctagcggccggtttccaacattcttgcatgattcgcctgcaaattga</cdnaseq>

Protein Sequence

<aaseq>MDRIVGGKFKLGRKIGCGSFGEIYLATHVDTYEIAAVKIESSKT KHPQLFYEAKLYNALQGGSGIANVKWCGVDGEENVLVIDLLGPSLEDLFVYCGRKFTL KTVLMLADQMITRIEFMHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDST TNRHIPYRENKNLTGTARYASCNTHLGVEQSRRDDLESLGYVLLYFLRGSLPWQGLKA ATKKQKYDKICEKKISTPIEVLCKSCPVEFASYFHYCHSLTFDQRPDYAFVKRLLRDL FTRQVYEFDYVFDWTVLRYKQGQKVQHGSGATITRATPGDLDKTAGVNGAFPHNEARE QTGPSHLAGSAAQLQVKRSTERGPHPNIQHTENITQDMTARKHLAASVLPGAEWRKDG NSRQLGQLDALHQKQSFVSNTGSSSGRFPTFLHDSPAN</aaseq>

Gene Sequence

<dnaseqindica>213..288#420..460#1054..1123#1215..1363#1858..1953#2041..2111#2225..2286#2366..2429#3323..3407#3492..3618#3731..3795#4454..4511#4642..4781#5339..5527#ggcggaagcaaaagcacgcatgcgcgcgcgccgcctccacctgctctctgctcgatcgccccgctccgctgcgacgtccgcaccaagcaacaaccgcgcgacgcctgcgcttccccctccccctcctcgtcgtcttcctacttagcccaatccccaagccggaattcctcgggggtttggttcacgcggcgcgggcggggagtgggaggggcatggaccgcatcgtcggcggcaagttcaagctcggccggaagatcgggtgcggctccttcggggagatctacctcggtaagaagcggcggccgccgctcgattgattcgtttccgtggcgcggctagggttgcggcggcggttggggttttttactgcgtgtcatctgaatcatctgatgatgttattgttgttgttgttactgcagccacgcacgtggacacctacgagatcgcggcggtgaagattgtgagtccactgaacttctgttcgatttttttttcgattcggttgctgtttattctgccgtgcgatacgaattagtgttccgattgattttgatgaaaatttccagttactagttggttgttttagcctttgtaggttgctgatgataagattgaaaatgctgtgatgataattatgcggttaacaactttgaacgatcgaggatgtgtaaccgctgcatttactttttcttagtttagttgtacggctagctacttggcctattctcttacgtcatgatgattgatgagcgtggatggaggttgactacttgactgggtaggccatgattacgcttggcgtagtggagttgcattggtagtgctttaagcaagagctgcgacgaggaacacaggggtgtgtgtgtgtgagagagagagagagagccaaaagttagtgttgcttgaatcagattccttctttgatgagtacaagttgtttgtgcttttgtcctgttcaatcctcatatgcttctttgatggcttataccacacagttgcatgctatgtttgtatgtagtagaagattaatttgattgctcgttttattatcaggagagtagcaagacgaagcatccccagctgttttatgaggcgaagctctacaacgctctccaaggaggaagtaggccctgaatacagttctgcatagtgcaattgtgcactctgttttgatgagatcatgagttgattggaaaaaaaattatggcatccaggtggcattgcgaatgttaagtggtgtggtgtagatggagaggaaaatgtcctcgtcatcgatttgcttgggccgagcttagaggatctgtttgtctattgcggcaggaaattcactctgaagacagttctaatgttagcagaccagatggtaactaatattttgcattgcttaattcattttattccaactcattattgatagcgtggaaaaacttggagaatggcaacattcttttcagaagtttgaatactagtgaaactgtgaattttacttatgcaacaattttcattttggatgatcagtctcacagaaacaaaaggtttattggtgagagtttttaaatttcttggatagttccatgttgtcttgttctctcacaatagtcattgaacaccaaagttcatttctaacagttatctgaaatatttcattataaagtttcccaatcgccatgctgattcaacaaaaaagaacaaaaggaagtgtatctctcttttgacatgcaaaacttagttttacaacttatcacctgcagttgtccttgtaccaactcaatccttttctttttctcttctctgcatgcatgagttgagcactgtgaatgattaatttaagactttttctgtaaataattataacagattactagaattgagtttatgcattccaaaggatacttgcacagagatataaagcctgacaactttctgatgggcctcggtcggaaagcaaatcaggtactgactactgagtgtgacaacattcaagctccttgtagggattaatatgctatctaattttgtttccctactcttgattatcaggtatacataattgattttggacttgcaaaaagataccgggattccactacaaatcgtcatatcccttataggtacttttgcatttgtaagatttactgctttataacgttggttccgcttccttgtatcactagtatatacaattaactgtgattcaaaagattatcatgatggccttttgcagagaaaataagaacctgactggcactgcacgctatgcaagttgcaacactcatcttggggttggtaagttgtgaccggcagttgtcaaatcattttgaaaatttgaatttttttttacatcattgttggattttattgacagaacaaagtcggcgggatgatttagaatctcttggttatgttcttctatattttctccgaggaaggtaagcatatcttttctgctttctagcaaagtatgtcaatgatcttcacatgtggtgaagtgttctaggctagtatctgagtgtgtagtgcttaaagatatttatttacagtgaaataatagcacagggcagatgtttttgatatatttggttgctagataaatatgatatctttagaagtttcaagcgcttactttctgaaaattctttcagttacaaatgcaaattttgtctagcaactttaaagttccaactacagtatctttaaagtatgcaaggacactgcttttttctaggaactagctgaatgcccgtgcgttgcaacggaattttggaaaggaagaaatttattatacacattttaaatacctcaaacaaaatagtcacattctttttctctaaatcatctagctgcttttgccatcaccttcacacgggaatttaaaagacacacatgttacgccgtaacaacaagtagcccacctattagggagtggtaggtggtgggtggcagattcaccactcaccatcaccattggagtcttttaaaatggtatagaaaactgtagacctcctcggtcaccagaacctcaacaccagcatacctcatcaatcatgtagcaactatttgacactagaaggtgggaacctgctcttattttaggaccagatatattttgttaacacctgcagagtatttacacaaatgattaatgcagtatgaagtagtttgctaaagttcccctgccatatttttgccaatttctgtctaatcaatgccatgcttccactccagattagtttaggtgcaatatcaaagatatcataattttctttttcagatctaagacaatattcttatgctaaccattttaacgcacttctctgtgaagcctcccgtggcagggacttaaagctgcaacaaagaagcagaagtatgacaagatatgtgagaagaagatttcaacacctatcgaggttcgtatctcataaacatatcaataaggttatggcaaatgaatactgtttagtttgtttctgactgacaaacacttctattaggtgttatgcaaatcctgtccagtggaatttgcttcttacttccactactgtcattccttgacatttgatcaacgacctgattatgcctttgtgaagcgccttctccgtgacttgtttacgcggcaaggtattaagtggtaccaatcagtatgttcagaattctgttgttccaagctccaacatattatgattgactctgtatgtttattaatatccaatattttcttcatcttttacagtctatgagtttgattatgtcttcgactggactgtgttgagatataaacaaggccaaaaggttcaggtatattgtcttgggtcaaaatagcctacttagtatcgatttattaccatttgcggtatgttttagtttacctccagtccatcattcatcagttttctcagctgtgacgctgtcaacatatggtgtatttggggccttgagtgattatccggcacttgtttgtcacttaactttatgaacatttatttgcttgttgtattgtatcctaattttgtgtatttgatatggttcttattttccaaaaagtgctatattgttgccacatgaatgctactaatcattttagtaataaaatcatcaaaattgaaatggaaagataacggatttggctttatggatcaaatttgtaccataactaactggagggtgtgggtagtgagacatcatgcaactatcaagggtttttcataatgttctcgcgagaatcttcatgtgttttgttatggcgctttcggtttagttatattcatatttttattattgtactttacttgctttggtttgtgggactcatcttgggctttatgagcctactgcaactcacatgggtgtgacggttgcggttgttgtttttgtagaactgttagtggttctggagaacatcaaaatccatggtctatttaagtgatgaactgactttttcatggcctgtttgtagcatggttccggagcgactattacaagagcaacccctggggaccttgacaaaacagcaggtaaaagaatttttctgccctttcataatcatatgcctatcgagttcattgcctgtttgaatatgtagtccatactagaaaatatatgaaaacgatttgataaaatttcttaaaaatatgtaacttctaggtgtaaatggtgctttccctcataatgaagcccgggagcaaacagggccaagccatctggcagggtcagctgcacaattgcaggtgaaacggtcaactgagagaggtccccaccctaacattcagcatactgagaatattgtaagtccactagactactagagtgcttgcatgcaacttgcttttatagtttggaaaatagttgtattgatacttattcactcacatgagatgtaattgattatcactagttttgttttaattgcttctttggataaacattccagataatttctggaattgtggaatttgaagtgcaagcacgaaactaatcattaacattttctgtaattagtgcagtggtattaattgtgcaagtacgatgccattaaatcttgtttgcagtatttggtcataatcttctgttctgtataatgggtttatcatatcttgccagcctaggaagtaaattagtagaggtgcaagtgcaacaaaccttcatatgttgttaattagcattggtagatcacacttatgggttattttctgaaatctctcatgtggaagaaatgactttgtagtatgtgcgaaaaacccatttcacataaatgatctgtataattgtccatttccccttcatctgttgatttcttgagtcatcattttgttcataagttggttgatatcttcaatttcagacacaagacatgactgccagaaagcatctcgccgcatctgttttacctggtgccgaatggagaaaagatggtaactcaaggcaactagggcagcttgatgctttacatcagaagcagagttttgtcagcaatactggctcatctagcggccggtttccaacattcttgcatgattcgcctgcaaattgacaggtaaacttttaacaatatcttttttgatcaattctaacagtagagtttcacttattctcttgttggtcctttacaaatttctgtttctgaataggtcatctattatatgaggcagcggggaaatgctcagaagatgctccatctatttcaagtggttcagagtcatgtatctcaaaagtcaattaagcatcaccatgcaacatgtatgttagaaaggtggctgcagatttgtttgatgatgatgctacctgctaattatgcaaggtttgctcgctgttgtgatgaatgatccagcagtttgtttagactgctgcttaaacattttatttgttacaggattcgataacatgtaaattgtttatatgttaatagatatatggtatgggcatattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0231500, RefSeq:Os01g0231500