Os01g0239000

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Revision as of 04:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0239000| Description = Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1)| Ve...")
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Gene Name

Os01g0239000

Description

Similar to Phosphate starvation regulator protein (Regulatory protein of P- starvation acclimation response Psr1)

Version

NM_001049077.1 GI:115435567 GeneID:4326363

Length

6881 bp

Definition

Oryza sativa Japonica Group Os01g0239000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7685881..7692761

Sequence Coding Region

7686277..7686438,7687097..7687225,7687734..7687811,7687991..7688449,7690628..7690768
,7691751..7692401

Expression

GEO Profiles:Os01g0239000

Genome Context

<gbrowseImage1> name=NC_008394:7685881..7692761 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7685881..7692761 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttgaggtgtccacgctgcgaagccctaaggcggatcagcgggcgggcgtcggcggccaccatgtcgtcggcttcgtcccggcgccgccgtcgccggccgacgtcgccgacgaggtcgacgcgttcatcgtcgacgacagctgcctgctcgagtacatcgacttcagctgctgcgacgtgccgttcttccacgccgacgacggcgacatcctcccggacctcgaggtcgaccccacggagctcctcgccgagttcgccagctccccggacgacgagccgccgccgacgacgtcggctccgggccccggcgagccagctgctgctgcaggagccaaggaagacgtgaaggaagatggagccgccgccgccgccgccgccgccgccgctgactacgacgggtcgccgccgccaccgcgggggaagaagaagaaggacgacgaggaaaggtcgtcgtcgttgccggaggagaaagacgcgaagaacggcggcggcgacgaggtcctgagcgcggtgacgacggaggattcctcggccggtgccgccaagtcgtgctcgccgtcggcagagggccacagcaagaggaagccgtcgtcgtcgtcgtcatcggcggcggccggcaagaactctcacggcaagcgcaaggtgaaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctcgggatagacaaggccgtgccgtccaggatcctggagctcatgggcatcgagtgcctcactcgccacaacatcgccagccatctccagaaatatcggtcgcacaggaaacatctgatggcgagggaggcggaggcggcgagctggacgcagaagcggcagatgtacaccgccgccgccgccgccgccgcggtggcagccggcggcgggccaaggaaggacgccgccgccgccactgcggcggtggccccgtgggtcatgccgaccatcggtttccctccgccgcacgcggcggcgatggtgcctcccccgccgcaccctccaccgttctgccggccgccgctgcacgtgtggggccacccgaccgccggcgtcgagccgaccaccgcggcggcgccaccaccaccctcgccgcacgcgcagccgccgttgctgcccgtctggccgcgccacctggcgccgccgccgccgccgctgccggcggcgtgggcgcacggccaccagccggcgccggtggacccggcggcgtactggcagcaacagtataacgcggcgaggaagtggggcccgcaggcagtgacaccggggacgccgtgtatgccgccaccgttgcctccagccgccatgttgcagaggtttcctgtaccgccggtgcctggaatggtgccgcaccccatgtacagaccgataccgccgccgtcaccgccgcaggggaataaactcgctgccttgcagcttcagcttgatgcccacccgtctaaggagagcatagacgcagccatcggagatgttttagtgaagccatggctgccgcttcccctcggcctcaagccaccgtcgctggacagcgtcatgtctgagctgcacaagcagggcatccccaaggtgccaccggcggcgagcggtgccgccggctga</cdnaseq>

Protein Sequence

<aaseq>MLEVSTLRSPKADQRAGVGGHHVVGFVPAPPSPADVADEVDAFI VDDSCLLEYIDFSCCDVPFFHADDGDILPDLEVDPTELLAEFASSPDDEPPPTTSAPG PGEPAAAAGAKEDVKEDGAAAAAAAAAADYDGSPPPPRGKKKKDDEERSSSLPEEKDA KNGGGDEVLSAVTTEDSSAGAAKSCSPSAEGHSKRKPSSSSSSAAAGKNSHGKRKVKV DWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKHLMAR EAEAASWTQKRQMYTAAAAAAAVAAGGGPRKDAAAATAAVAPWVMPTIGFPPPHAAAM VPPPPHPPPFCRPPLHVWGHPTAGVEPTTAAAPPPPSPHAQPPLLPVWPRHLAPPPPP LPAAWAHGHQPAPVDPAAYWQQQYNAARKWGPQAVTPGTPCMPPPLPPAAMLQRFPVP PVPGMVPHPMYRPIPPPSPPQGNKLAALQLQLDAHPSKESIDAAIGDVLVKPWLPLPL GLKPPSLDSVMSELHKQGIPKVPPAASGAAG</aaseq>

Gene Sequence

<dnaseqindica>6324..6485#5537..5665#4951..5028#4313..4771#1994..2134#361..1011#gttctctcctctctctctctctcttcttcctcctttctctctccccatcttcttctccttcctatccattagctagctagcttgagagatctccattagagagagcttgcccatatgcactagcaccatccatgcatatgcatcttgtagttattgcttgctctcttcaatcccagctttgcctctaaatccagcagacgcatcggatatatatcttcaatcttcaaccatatagtggttgaattgaatctacatgtatatatagatgagaattagaggcttagagctggagatttcgaagtaaatatatttcttggtcgcctgccgatcttgcgaggtgtagaggggagagattttgggatgcttgaggtgtccacgctgcgaagccctaaggcggatcagcgggcgggcgtcggcggccaccatgtcgtcggcttcgtcccggcgccgccgtcgccggccgacgtcgccgacgaggtcgacgcgttcatcgtcgacgacagctgcctgctcgagtacatcgacttcagctgctgcgacgtgccgttcttccacgccgacgacggcgacatcctcccggacctcgaggtcgaccccacggagctcctcgccgagttcgccagctccccggacgacgagccgccgccgacgacgtcggctccgggccccggcgagccagctgctgctgcaggagccaaggaagacgtgaaggaagatggagccgccgccgccgccgccgccgccgccgctgactacgacgggtcgccgccgccaccgcgggggaagaagaagaaggacgacgaggaaaggtcgtcgtcgttgccggaggagaaagacgcgaagaacggcggcggcgacgaggtcctgagcgcggtgacgacggaggattcctcggccggtgccgccaagtcgtgctcgccgtcggcagagggccacagcaagaggaagccgtcgtcgtcgtcgtcatcggcggcggccggcaagaactctcacggcaagcgcaaggtgaaggtatatccctactaccaaccacacaactaacacttcagccctaattataactattttatcgaacaccatgcgcgcgcgcacacacacagctagctctaccacacagaggggaaaagaaaagacaaaaaaaaatcaaaacggcatcagaattaactcctcgatcagctcagatgagagatacaattaacagtcaatcaccccaagctcaaactaatcatactgcacatataattttttttctctctctgacgagcagatctgactgatatacagacgaacgggcatgcagaaggcaacaaactagcagcgtcctgcagcagattcaaattactagtatagttctagacagagcgaggcagatccaaaccacacgctgcgcgctgctgctgcggctgctgctagcgccatgcacgacggacgacgcgtcacgggcaatccgcacagacgcgcacacacatgttagcctgcctgcgcggctgcgggcgcgcgtgtgggcgcggaggcggagcgtacgtacgtgggggcaatgaatagggcgcggaaatgcccgtgtaggagtaagccttttacggatggatcgaacgctcgctactatacaccgtaccgacgaagagaggcgatggattcgcaggatagatctcggggaggagagggccgtgcgcgctcacgggaaggctcatacagtattcatatagctagtcatggatagagtgggtgtatactgtatagtagctagctagaccacaccagcacagacacatgcacagagagtacgtctctcgattgctcgtgcagtcctgtcgatctctcgatcgatcgtctgcagtggccaaatggccactgttgctagctagctgcgcatgcagtagcagagatgacatgtaggtgtaggcaggcacagtgatattacaagagattaattagtggatgtggttttgagaaggatatggatcgatgatggattggtggatatgtgttgcaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctcgggatagacaaggccgtgccgtccaggatcctggagctcatgggcatcgagtgcctcactcgccacaacatcgccagccatctccaggtctatatatattaatttcactatatccagtactaggtcatacatactaggttataatataattttgatagattttctctctcttaatacatacgaggttcttcagcacagttaattaaaagaggcatgtctttcagaggcgaacgaaaaacactcttgtacttgtatatatggccttgcacacgaaaatgttcgttcttaaatttatatagagtattaggagtataatatgctagtaatagtatacagtacatctatacattttgtgggttgtgacactgtcaggcttagatctgggaggaacatagtacagggagcattgtccaaaaactggcgccgcgacaaacgacgccagtagccctgatgtacgtaacgtagtagcgagtacgagttactacaccgcagcatgaattattaatatttactcgatcccttgagtcaaccaagaactcatggcaccctacaataacatactacttcgtccttaaaaaaaaatcgatcctaattactataaacctgagcatggtccaggttcttcgtaggtagaataataggatcatgttttttataggatgtagaggtggtactagttaatgtagtataccaatcattttcagttttgatcaaacaaaccattcgcatcttaatttgagagtgctatagtagcaactaattaagcaagcgttttgagccaaaacaattgcatgtgcatcttcgttttttaccgcaccatctcgcacgaagcagtagctaggaatgtcaagtttttttttaccaggtgctgcatgctgagctagtaactgaaggttaaaaggcctttaaagacgagcaaatgcatgcatgcaagcaaacaagtatagctaggcaggcagcagtagtactgcatgcgggtgcagagggcaagcagaagcagggaggcaaggctagccagactcgcatcgtatccaagctaaagctaggaataggatattattcccctggctcaaaccgtgcaacggcgacgcgccaaagccgagtagtcgccacgccacaagccgccactgccacggtcgtccccgcatgctccaccgctgcccgctagctttgtttgcgtcgttttgtcacctccgatccggtaaccagctaatggctactagtacttacctccgatgaagtcgtgttacctctgcgaatataaacattataattgtatgtttatagtgtgatataaactttaaatcctcaaaatactttatatttttaaactgatacagcagtaactagccagaggacatttgcggaagaccgggtaatatttatttaacgaaattctcgctttaaacttgaaaagttagtcttttttacgatactggtgcttttgtcggaacttggggaatgtttagattgtagtcaaaataaaccttgtcaaatattaccaaatttataggattttttatatatttactaagtttttttaagagaaggaaaatagaagaacgttcttatgtatttactagagtattgtaaaaaactaaacggatatatatatttgacaactttatttaaaaaaaatgaaatgatttaaaatggtgtcaatatgaacaaccccttgtacgtaataaaatgttggtttaacaattatgcggcagctacctaaataaaacaagagactgtctatatgggattcgcatgattttttagtctttcatcatgcagtgtttcactaactagatcaaaaatgtttcatcaagtagatcgaaaatgtttcaatcttttaaaaaaattggaacacaatgaaatcaccccatgaaacattttgctacaacatatgaaacaacggttctgaatgtttcaccaagtagatcaaaaaaatgtttcaccaagtagatcgaaaatgtttcaatcttttaaaaagctgaaacgccgtaaatgttttaccaagtagatcaaacatgtttcaatctttttaaaagctaaaacacaattaaatcatctcgtgaaacatttttctacaatatatgaaacaacggttctaaatatattgaaatatgaatgatttagctataaaaaatcatgcgacagctatttagcattcccgataaaacaattatgcggtagcagctgagctgatacatactgtgtatttgtgagttagtactagtagttaatattgtgcatttgtgcgtgtactgcgtgcagaaatatcggtcgcacaggaaacatctgatggcgagggaggcggaggcggcgagctggacgcagaagcggcagatgtacaccgccgccgccgccgccgccgcggtggcagccggcggcgggccaaggaaggacgccgccgccgccactgcggcggtggccccgtgggtcatgccgaccatcggtttccctccgccgcacgcggcggcgatggtgcctcccccgccgcaccctccaccgttctgccggccgccgctgcacgtgtggggccacccgaccgccggcgtcgagccgaccaccgcggcggcgccaccaccaccctcgccgcacgcgcagccgccgttgctgcccgtctggccgcgccacctggcgccgccgccgccgccgctgccggcggcgtgggcgcacggccaccagccggcgccggtggacccggcggcgtactggcagcaacagtataacgtgcgtacgaaaaaaaaggaaaaaaaaactgtttcctctgtgacgtagtatcgtgcatgtgacactagcttatagcttgcttttccagtgatgctttgctcgctttggctgcctgcatatgttgtgtgaactttaatctgatgagttgacgcctggggttttcatgcatgcatatgcaggcggcgaggaagtggggcccgcaggcagtgacaccggggacgccgtgtatgccgccaccgttgcctccagccgccatggtaatttcaagcaaagtaaaaataagttaatctaagtatgttattaacatcccaatactataaatctacttcctataataataagatttaaatcttagggataaatctagacacacatatatctagatgatttaagtttttttcgacagggtagtatggagcactcctcccacttaaaaaaaatcaacctctaattatatatatggatatagtatgttatcagatatatatagttagaagttcgattttattggacagagaaattatatgctattaattagaaacaaaccattgaacttcttataaattaagagtgctctcttcgtacataaatataagtattcatgatgagaattggaaaaatttaaatgagaagtgaataataagataagcagtacttaatggatccttatatttgtcaacaaatttcaagtgcttctaatacttatattcttagataaattttaaatgcttatatatttttggctggtgtatgtgttatgtacagttgcagaggtttcctgtaccgccggtgcctggaatggtgccgcaccccatgtacagaccgataccgccgccgtcaccgccgcaggggaataaactcgctgccttgcagcttcagcttgatgcccacccggtaagtatatatgcacttcacttttttttttctttaacacacgcttaaactgttaaacagatagatgctaaaaataaaatccattgattaacgtcttcataatatttaatagcattcaaattgtgcttatctacatagaaagtactctctccttccaaaagtctaagacttattttatttttttattttttttttaaaagtctaggtcctatttatagtcattatgtgttaaattaaattgttgataggaacccaagaagccattttagtgtttatgggttgcatattcattggtttgtcatatggtgaatgaattaattgcttcttggtcttggtgaaaaagaaataggacttagactttcggaataagagagtaatacaaagaatgtgttctaataagacctatttagcacaactccaggttctagatatatgttgggttaggaaattatagtaatttaaaattctatatattctctctaaagtaaaattatttatcatagattcagattcattgaaggaacacttatctctaagaaatctcgggtccgaagctatgtcaaacaaacctaaaccacgctagctgatcggatgaatttttattagttttgttgctccggcatgtgtatatgtatgtttaattttgtctcggttgcagtctaaggagagcatagacgcagccatcggagatgttttagtgaagccatggctgccgcttcccctcggcctcaagccaccgtcgctggacagcgtcatgtctgagctgcacaagcagggcatccccaaggtgccaccggcggcgagcggtgccgccggctgatacacatcgatcacaccgatcgtctcctccgccgccggcgaaaaaaaaaaaaacctctcctctctgctccggccggtctccacgatgagaagaggcaatgcaacccgtcgacttgtcgtagcttcgtcagtgtgaattgattcatcatgcattcacccaatgcgtgtagacgagctcgatgtgtaaactagctagtgtgtcttgtgtgtttgcattgacatatctgggtttttgctctcatggaatgtgcatgcagagacgatgcaggcgacatgcatgcctacctgagagttgcgtgtaaaatataaaatgttttgagatggaacgtacacggactgctatatatattttggacagctggtaattaaattgagaaataaccaaggaacttacact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0239000, RefSeq:Os01g0239000