Os01g0239700

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Revision as of 04:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0239700| Description = Similar to Leucine-rich receptor-like protein kinase| Version = NM_001049081.1 GI:115435575 GeneID:4326367| Length =...")
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Gene Name

Os01g0239700

Description

Similar to Leucine-rich receptor-like protein kinase

Version

NM_001049081.1 GI:115435575 GeneID:4326367

Length

3749 bp

Definition

Oryza sativa Japonica Group Os01g0239700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7738110..7741858

Sequence Coding Region

7738212..7740828,7740909..7741300

Expression

GEO Profiles:Os01g0239700

Genome Context

<gbrowseImage1> name=NC_008394:7738110..7741858 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7738110..7741858 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtctggctcactcctcctctccctcttgctggtgctcgtcgtcgtcaatgtcggggtggcggtgaaccaggacgggctgtccctgctcgacgcgaggcgcgcgctcgccgccccggatggcgcgctggcggactggaacgcgcgcgacgccacgccctgcagctggacgggcgtctcctgcgacgccggcgtcggcggcggcgccgtgacggggatctccctcgcgggcctcaacctcaccgggtcgttcccggcggcgttgtgccgcctcccgcgcgtcgcgagcatcgacctgagctacaactacatcggccccaacctgagctccgacgccgtcgcgccgtgcaaggcgctccggcggctcgacctgtcgatgaacgcgctcgtcggcccgctccccgacgcgctcgcggccctcccggagctcgtgtacctcaagctcgacagcaacaacttctccggcccgataccggagtcgttcggccggttcaagaagctcgagtcgctctccctcgtctacaacctgctcggcggcgaggtcccgccgttcctcggcggcgtgtccacgctccgggagctcaacctgtcctacaacccgttcgtggcggggcccgtgcccgccgagctcggcaacctctccgctctgcgcgtgctctggctcgccggctgcaacctcatcggcgccatcccggcgtctctcggcaggctcggcaacctcacggacctcgacttgtcgacgaacgcgctcaccggctcgataccgccggagattacgcggctgacgagcgtcgtgcagatcgagctgtacaacaactcgctcactgggccgattcccgtggggttcggcaagctcgcggagctccagggcgtggacctcgccatgaacaggctcaacggcgccatcccggatgacttcttcgaggcgccgaagctggagagcgtgcacctgtacgccaactcgctgacggggcccgtgccggagtcggtggcgaaggcggcgtcgctcgtcgagctgcggctgttcgccaaccggctgaacggcacgctgccggccgacctcggcaagaacagccctctggtgtgcgtggacatgtccgacaactccatctccggcgagatcccgccggcgatatgcgaccgcggcgagctcgaggagcttcttatgctcgacaataagctctccggtcgcatccccgacgggctcgggcgttgccggaggctgcggcgggtgcggctgtcgaacaacaggctcgacggcgacgtgcccgccgcggtctggggcctgccgcacatgtcgctgctcgagctcaacgacaaccagctcaccggagtgatctctccggtcatcggcggcgcggccaacctgtccaagctggtgctgtccaataaccggctaactggtagcatcccgccggaaattggctcggcctcgaagctgtacgagctctccgccgacggcaacatgctctccggcccgctccctgggtctcttggcggcctcgaagagctcggccggcttgttctccggaacaactcgttgtcaggtcagctgctccggggaatcaattcttggaagaagcttagtgagctcaacctcgccgacaatggctttaccggagcaattccagcagagctcggcgatttgccggtgctgaactaccttgacctctccggcaaccgtctcaccggtgaggtaccaatgcaattggagaatctgaagctgaaccagttcaatgtctccaataaccagctcagtggcgcgcttccgccacagtatgcgacggcggcatatcgaagcagcttcttgggcaacccggggttatgtggagataatgccggtctatgtgccaattcacagggaggtcctagatcccgcgctggcttcgcctggatgatgcgctcaattttcatatttgcggctgttgttctggttgctggagttgcgtggttctactggaggtaccggagcttcaacaattctaagctaagtgccgaccgttcgaaatggtcattgacatcattccacaagctctcattcagcgagtatgagatcctggattgtcttgatgaggataatgtgattggtagtggcgcatccgggaaagtgtataaggcagtgctcagcaatggtgaggtggttgccgttaagaagctttgggggttaaagaaggggacggatgttgagaacgggggtgaaggatccacagctgacaacagctttgaggcggaggtgaagactcttggcaagattcgccacaagaacattgtcaagctctggtgtagctgcacgcacaatgacaccaagttgctggtgtacgagtacatgcccaatggtagcctaggagatgtgctacacagcagcaaggctggtttgctggattggtcgacgcggtacaagattgctctggatgcagcggaggggttatcctatcttcaccatgactacgtccctgcgatcgtccatagggatgtcaagtcgaacaacatcctcttggatgctgaattcggtgcccgtgttgcagactttggggttgccaaagtggtagaagccactgtccggggccccaagtcgatgtcagtgatcgcgggttcatgtggttacattgcacctgagtatgcatacacactccgcgtcaatgagaagagcgacatatacagcttcggagtggttcttcttgagctcgtgacagggaaaccgccagtcgatccagagttcggcgagaaggacctggtgaagtgggtgtgcagcacaattgatcagaagggggtagaacatgtcctcgacagcaaactcgacatgaccttcaaggatgagatcaacagggtgctgaacatcgccctcctctgctcgagctccctaccgatcaaccgcccggcgatgcgcagggtggtcaagatgctgcaagaagtgcgcgccgaggccacaaggccaaggctggagaaggacggcaagctgtcgccatactactacgaggacacctccgatcaagggagcagcgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MGSGSLLLSLLLVLVVVNVGVAVNQDGLSLLDARRALAAPDGAL ADWNARDATPCSWTGVSCDAGVGGGAVTGISLAGLNLTGSFPAALCRLPRVASIDLSY NYIGPNLSSDAVAPCKALRRLDLSMNALVGPLPDALAALPELVYLKLDSNNFSGPIPE SFGRFKKLESLSLVYNLLGGEVPPFLGGVSTLRELNLSYNPFVAGPVPAELGNLSALR VLWLAGCNLIGAIPASLGRLGNLTDLDLSTNALTGSIPPEITRLTSVVQIELYNNSLT GPIPVGFGKLAELQGVDLAMNRLNGAIPDDFFEAPKLESVHLYANSLTGPVPESVAKA ASLVELRLFANRLNGTLPADLGKNSPLVCVDMSDNSISGEIPPAICDRGELEELLMLD NKLSGRIPDGLGRCRRLRRVRLSNNRLDGDVPAAVWGLPHMSLLELNDNQLTGVISPV IGGAANLSKLVLSNNRLTGSIPPEIGSASKLYELSADGNMLSGPLPGSLGGLEELGRL VLRNNSLSGQLLRGINSWKKLSELNLADNGFTGAIPAELGDLPVLNYLDLSGNRLTGE VPMQLENLKLNQFNVSNNQLSGALPPQYATAAYRSSFLGNPGLCGDNAGLCANSQGGP RSRAGFAWMMRSIFIFAAVVLVAGVAWFYWRYRSFNNSKLSADRSKWSLTSFHKLSFS EYEILDCLDEDNVIGSGASGKVYKAVLSNGEVVAVKKLWGLKKGTDVENGGEGSTADN SFEAEVKTLGKIRHKNIVKLWCSCTHNDTKLLVYEYMPNGSLGDVLHSSKAGLLDWST RYKIALDAAEGLSYLHHDYVPAIVHRDVKSNNILLDAEFGARVADFGVAKVVEATVRG PKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVLLELVTGKPPVDPEFGEKDLVK WVCSTIDQKGVEHVLDSKLDMTFKDEINRVLNIALLCSSSLPINRPAMRRVVKMLQEV RAEATRPRLEKDGKLSPYYYEDTSDQGSSV</aaseq>

Gene Sequence

<dnaseqindica>103..2719#2800..3191#cccatcgccgccgccaatgccggcctccacggcctcgccaccgccgcacctcgtctgaacccccgtcttgctgccgccggaaaccgcgtcgagaagttaaccatggggtctggctcactcctcctctccctcttgctggtgctcgtcgtcgtcaatgtcggggtggcggtgaaccaggacgggctgtccctgctcgacgcgaggcgcgcgctcgccgccccggatggcgcgctggcggactggaacgcgcgcgacgccacgccctgcagctggacgggcgtctcctgcgacgccggcgtcggcggcggcgccgtgacggggatctccctcgcgggcctcaacctcaccgggtcgttcccggcggcgttgtgccgcctcccgcgcgtcgcgagcatcgacctgagctacaactacatcggccccaacctgagctccgacgccgtcgcgccgtgcaaggcgctccggcggctcgacctgtcgatgaacgcgctcgtcggcccgctccccgacgcgctcgcggccctcccggagctcgtgtacctcaagctcgacagcaacaacttctccggcccgataccggagtcgttcggccggttcaagaagctcgagtcgctctccctcgtctacaacctgctcggcggcgaggtcccgccgttcctcggcggcgtgtccacgctccgggagctcaacctgtcctacaacccgttcgtggcggggcccgtgcccgccgagctcggcaacctctccgctctgcgcgtgctctggctcgccggctgcaacctcatcggcgccatcccggcgtctctcggcaggctcggcaacctcacggacctcgacttgtcgacgaacgcgctcaccggctcgataccgccggagattacgcggctgacgagcgtcgtgcagatcgagctgtacaacaactcgctcactgggccgattcccgtggggttcggcaagctcgcggagctccagggcgtggacctcgccatgaacaggctcaacggcgccatcccggatgacttcttcgaggcgccgaagctggagagcgtgcacctgtacgccaactcgctgacggggcccgtgccggagtcggtggcgaaggcggcgtcgctcgtcgagctgcggctgttcgccaaccggctgaacggcacgctgccggccgacctcggcaagaacagccctctggtgtgcgtggacatgtccgacaactccatctccggcgagatcccgccggcgatatgcgaccgcggcgagctcgaggagcttcttatgctcgacaataagctctccggtcgcatccccgacgggctcgggcgttgccggaggctgcggcgggtgcggctgtcgaacaacaggctcgacggcgacgtgcccgccgcggtctggggcctgccgcacatgtcgctgctcgagctcaacgacaaccagctcaccggagtgatctctccggtcatcggcggcgcggccaacctgtccaagctggtgctgtccaataaccggctaactggtagcatcccgccggaaattggctcggcctcgaagctgtacgagctctccgccgacggcaacatgctctccggcccgctccctgggtctcttggcggcctcgaagagctcggccggcttgttctccggaacaactcgttgtcaggtcagctgctccggggaatcaattcttggaagaagcttagtgagctcaacctcgccgacaatggctttaccggagcaattccagcagagctcggcgatttgccggtgctgaactaccttgacctctccggcaaccgtctcaccggtgaggtaccaatgcaattggagaatctgaagctgaaccagttcaatgtctccaataaccagctcagtggcgcgcttccgccacagtatgcgacggcggcatatcgaagcagcttcttgggcaacccggggttatgtggagataatgccggtctatgtgccaattcacagggaggtcctagatcccgcgctggcttcgcctggatgatgcgctcaattttcatatttgcggctgttgttctggttgctggagttgcgtggttctactggaggtaccggagcttcaacaattctaagctaagtgccgaccgttcgaaatggtcattgacatcattccacaagctctcattcagcgagtatgagatcctggattgtcttgatgaggataatgtgattggtagtggcgcatccgggaaagtgtataaggcagtgctcagcaatggtgaggtggttgccgttaagaagctttgggggttaaagaaggggacggatgttgagaacgggggtgaaggatccacagctgacaacagctttgaggcggaggtgaagactcttggcaagattcgccacaagaacattgtcaagctctggtgtagctgcacgcacaatgacaccaagttgctggtgtacgagtacatgcccaatggtagcctaggagatgtgctacacagcagcaaggctggtttgctggattggtcgacgcggtacaagattgctctggatgcagcggaggggttatcctatcttcaccatgactacgtccctgcgatcgtccatagggatgtcaagtcgaacaacatcctcttggatgctgaattcggtgcccgtgttgcagactttggggttgccaaagtggtagaagccactgtccggggccccaagtcgatgtcagtgatcgcgggttcatgtggttacattgcacctggtaagtctcactaattattttagatgtaagtttcagttagtcctttagaattgtgaatctgatgtacttgttttgtgcagagtatgcatacacactccgcgtcaatgagaagagcgacatatacagcttcggagtggttcttcttgagctcgtgacagggaaaccgccagtcgatccagagttcggcgagaaggacctggtgaagtgggtgtgcagcacaattgatcagaagggggtagaacatgtcctcgacagcaaactcgacatgaccttcaaggatgagatcaacagggtgctgaacatcgccctcctctgctcgagctccctaccgatcaaccgcccggcgatgcgcagggtggtcaagatgctgcaagaagtgcgcgccgaggccacaaggccaaggctggagaaggacggcaagctgtcgccatactactacgaggacacctccgatcaagggagcagcgtgtaaaggtaaaaacccccaaaagagaagaagatgacaataggccaatagctgcttccatgaatcttctcccatggcttgtagagctgtagctaggtaggaaagctgcaatcataacccagtcgtgtccaaaattctatagttgctgattttgagcgctgaatttgctcgccgccgacgccggcctccgacagcacggttaactctggagctgtgcactccagtccggcaatggaggacagtaagctggtgggtgcccggtgttcttggttgtccttgctgtatgtggaccgtgccattgatgccggtagggcagatcgctcgtctgctgtccatcgagagaagaaaagtctgtgacggaatcaaatgtaggtgtgtactgtaattagtactgctactttgccttttctcctgagataagctaggagtattgttcaaggctcatggtgatggcccatggggtggttggatcaagtatttcctgctcttcaactcagcaggagagatggaaatactaatgcaaacgagtgaatgaatgaatctgacctctttattacgagtact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0239700, RefSeq:Os01g0239700