Os01g0242300

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Revision as of 04:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0242300| Description = Optic atrophy 3 family protein| Version = NM_001049089.1 GI:115435591 GeneID:4327695| Length = 3072 bp| Definition ...")
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Gene Name

Os01g0242300

Description

Optic atrophy 3 family protein

Version

NM_001049089.1 GI:115435591 GeneID:4327695

Length

3072 bp

Definition

Oryza sativa Japonica Group Os01g0242300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7851669..7854740

Sequence Coding Region

7851771..7851899,7852750..7852884,7853044..7853130,7854236..7854397

Expression

GEO Profiles:Os01g0242300

Genome Context

<gbrowseImage1> name=NC_008394:7851669..7854740 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7851669..7854740 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgctgccggtggcgaagctggggacgctggcgctgcggacgctgtccaagcccatcgccagccgcctcaagaaccaggccgccgtccaccccaagttccgcaacttcatcatctgcatcgcgcagattaaccatcgtgttactacaaggatacaaaggcgcatttatgggcatgcaacagatgtggaaatcacacctttaaatgaggagaaagctgtacaagctgctacggatctcattggagaaggctttattttttcggttgctgttgctgctttaatttttgaggtgcaaagaaatgcaaggtcagaggctaggaaggaggaagctcgtaaacaggaacttgaggaattgaaacaacgggaagagagtttatctaaagatttggaggatcttaaactgaggcttgctgaaattgagcacctcgctaaaggacgaggcctttcaggaatcttgaacttcaaaggtgttcatggagcagaaagcagcaaggcagcaacacctgcttga</cdnaseq>

Protein Sequence

<aaseq>MSLPVAKLGTLALRTLSKPIASRLKNQAAVHPKFRNFIICIAQI NHRVTTRIQRRIYGHATDVEITPLNEEKAVQAATDLIGEGFIFSVAVAALIFEVQRNA RSEARKEEARKQELEELKQREESLSKDLEDLKLRLAEIEHLAKGRGLSGILNFKGVHG AESSKAATPA</aaseq>

Gene Sequence

<dnaseqindica>103..231#1082..1216#1376..1462#2568..2729#tactgctccccccatcgaatcgaatcgaatcgaatcgaatcccctcacgattccaccaatcctccgccgccggaggaggaggccagggaatcgccgccgccaatgtcgctgccggtggcgaagctggggacgctggcgctgcggacgctgtccaagcccatcgccagccgcctcaagaaccaggccgccgtccaccccaagttccgcaacttcatcatctgcatcgcgcaggtcggggcctcctcctcctcctcctactccccctcatcgtgttgtgttcttcggagaaagtagcgcctaagggaaggaaattttgataagggaaaatgatcggagcagcatccgttaggctcgtgggaaggggatctggttagggctatttactcccaatatccatttcttggtaacgaaaaacttacatacttaatgaaatgtgtgcccctcgggggaaaaaggaaagaggaaatgtgtgcccgtgaaaggggattttgcagagttgacagaatgtaaagataaagaattaaagagtagtaggaggaaatgtggctgtcttgaatcttgatgatacttcagcacagtaccatctggcgaatgggtggagcaatttccaagaagcaactttagctgtttggtgttgtgcaagcattttgtagtttaattgtaggtcagttggtcttgatcatcagctgatagattcatcaataagcgtttcatcccatttgaggttgttcgattctggcttgtcagaaatggctggacactgatctatgataggtttctgtctatgatgtgagctgtctgccatatatggagcttcatatttcacatatctgacttagaatacacatcatatattcttttaattagagaaataaggattgaggaatacagggagcatgaaccttgaggagatttatccttgtccttaggatttatgcttttggaaatttgtacatctggctttttctaagatagagccctctcaaatgtatttacgtgttgtgggctgtggccgtatcctttgtgcccttatgaggtctgacatataactaaccgattgtaactataacaattgttacagattaaccatcgtgttactacaaggatacaaaggcgcatttatgggcatgcaacagatgtggaaatcacacctttaaatgaggagaaagctgtacaagctgctacggatctcattggagaaggctttattttttcggtacttcacttaacctacaatgaaccttgtatgccaatagatttatagtagccacaggaatatatttgctgggctgaagtaaccttgctctgttatgtgaaaaaataaagaaaataattgaaatatcaggaaatgaaacctgcatctttttggttttaggttgctgttgctgctttaatttttgaggtgcaaagaaatgcaaggtcagaggctaggaaggaggaagctcgtaaacaggaacttgaggtggtactttctaacgtggttcggtctagcattgactcatttctatatttttctcctggagtttgaacgaacataaatatgctacaacacttaacagccatatatcccgtattcactatttaatcttgcacgtaagaatgaacatacaaaactctaatctataagcccttatgctgtagccagagtaatttaaatttgatgtccataggaagatgttataactcatgattgcagtttgggttctgaaaatttgtcatgtaaatacggagatagacatatctagtatcataacgactaggcctgttcattctgggtttactcaatctgtttaagactgaaaagtggaaatcaacgtgcttagtgtcatatttagcttagctcccagaggacacatcagaaaaattactatgcccagttttgcacagttcatccaaaatcaggaatgaacaacccaaataactacactgaatcttgtataagaaaacaattagcaggtggcaacctgatttagtttaatcaccaggaactggtcatgatcgatgcctgacgtatcagttgataagacatgctttagtactatgcctcctgctgtcttgcagtcgttttcagctgtcgcagccacagcggctgctgcagtaagcagagttgaacatgtcccaaataatatggatttatgtctaaatttatggaatgcacatgcagaaatgtttttagtgaactgctaggtgttcttcaaccacaccttgaatgccaccctttagaaacattttgaagtgtgaaatcaccatttacctggtgaaactttgcatgtggaatgaggatacctatttactactcactgttgaccaaaaaatctcttattaactattaatttaaaatcttagttcctgccagaatattattagaatatgtaaagtatgtcattcttgatgtgaaatgttataagaagttaatcaccggtctacttgacaatatatcatttaagttatcttcatagtaaaagttagcaatatgcgtaggttcagagagatgtttgttttcatttccaggttccttattgataatgccaaaatatagcttaacggttgtttttattgatctcaaggaattgaaacaacgggaagagagtttatctaaagatttggaggatcttaaactgaggcttgctgaaattgagcacctcgctaaaggacgaggcctttcaggaatcttgaacttcaaaggtgttcatggagcagaaagcagcaaggcagcaacacctgcttgatcaatcaaattaacttgggtcaggcgaaacaggatgatattttgttaagttgatgcgcaaaacacctcaaaatttcactgatctgttttgtgattcttgtgtggcagttcattgccatgcccattcttttggtgtatggatcaaaatatatgccggatgatccatagacaccctaaaataatagaggccaaggatagaaaaaggcactgtatcatgtagattacttctgggtaagtaactatagaacaagttcgaaagagtaaaagtgaatgtgatattgtactttgctaacacatcacgcacatagctacggctgaactgaatgcctccttttactctgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0242300, RefSeq:Os01g0242300