Os01g0242500

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Revision as of 04:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0242500| Description = D-tyrosyl-tRNA(Tyr) deacylase family protein| Version = NM_001049091.1 GI:115435595 GeneID:4327697| Length = 2234 bp...")
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Gene Name

Os01g0242500

Description

D-tyrosyl-tRNA(Tyr) deacylase family protein

Version

NM_001049091.1 GI:115435595 GeneID:4327697

Length

2234 bp

Definition

Oryza sativa Japonica Group Os01g0242500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7856808..7859041

Sequence Coding Region

7857088..7857148,7857226..7857299,7857380..7857405,7857831..7857971,7858077..7858107
,7858231..7858297,7858665..7858756,7858851..7858892

Expression

GEO Profiles:Os01g0242500

Genome Context

<gbrowseImage1> name=NC_008394:7856808..7859041 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7856808..7859041 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggccgtggtgcagcgtgtcctctcggcaagcgtcgaggtggaggggcgggtggtgtcggcgattggccccggcctcctcgtccttgtcggcgtccacgaggccgacaccgacgccgacgctgactacatttgtcggaaggttctgaacatgaggctatttcctaatgagaagactgaaaaggcatgggatcaaagtgttttgcagcggaaatttgaagttctattagtcagtcaatttaccttatatggaatcctgaagggtaacaagccagattttcatgtggctatgccacctgctaaagcaaagccattctatgcttctttagtcgagaagttccagaaatcatactcagctgatgcagtgaaagatggcatttttggagcaatgatgaaggtttctttagtgaacgatggccctgtaacaatgcaagttgactcatcctcattgcaaaatcctgctcagtcaagcaatggtgatgttggctcagttggggacaatgaagcacaagtacctaaagagacttcttaa</cdnaseq>

Protein Sequence

<aaseq>MRAVVQRVLSASVEVEGRVVSAIGPGLLVLVGVHEADTDADADY ICRKVLNMRLFPNEKTEKAWDQSVLQRKFEVLLVSQFTLYGILKGNKPDFHVAMPPAK AKPFYASLVEKFQKSYSADAVKDGIFGAMMKVSLVNDGPVTMQVDSSSLQNPAQSSNG DVGSVGDNEAQVPKETS</aaseq>

Gene Sequence

<dnaseqindica>1894..1954#1743..1816#1637..1662#1071..1211#935..965#745..811#286..377#150..191#gtggccactttcctcggcccatcgtgccatccgtctctctcaccgtctccgtgctcctccgccgcccaagggtgtctccggcgactcgcccggcgccgcacgcgaagcccggagatccggctgcggcggaggcgagaaggaagagggagatgagggccgtggtgcagcgtgtcctctcggcaagcgtcgaggtgagcgggttcccctctcccactcgctagctaggaggaggaggcgagcggctgattcctgattggttggttcccgtgggttttttggttgcaggtggaggggcgggtggtgtcggcgattggccccggcctcctcgtccttgtcggcgtccacgaggccgacaccgacgccgacgctgactacatgtgtgtgcccagcttacctgctcttactatttcgttctcgcatctcactgaatctggaatctgttattttttacgtgtttattagctacttagcttctttagtggagggagatatcatgaattcgtaatgtagaatgggagaagaaatgatggttgttgataaatcaatgatactagtacttgttgccatgtttgatctggaaacgtgtatactgtatagtttggaaagagcttcttagttctagttcaattacaaaagttccatctttgcgtttcctgcaattttgtttatgctcagatcttcagtaaatgtatgatgtatccttgtgttatattgtcactctcatactaacatgaccttacgcagttgtcggaaggttctgaacatgaggctatttcctaatgagaagactgaaaaggcatgggatcaaagtgtaagtcctgactcatcttggtatcaatatgacaaaaacaacctattcaagcatgtcacatatatctcctgtacttcatttgaggtttgaagatgaacctaaataactttttccttcttgcaggttttgcagcggaaatttgaagttctattaggtaggagtaatataatacagcatttctagtcccagatttgaaaattcttaagctgtagtagctttgttgttattgacaccgttactaagctgatatactattcagtcagtcaatttaccttatatggaatcctgaagggtaacaagccagattttcatgtggctatgccacctgctaaagcaaagccattctatgcttctttagtcgagaagttccagaaatcatactcagctgatgcagtgaaaggtaatatataatgcatatctatcatttctttttgcactatgtaactagcagtcctgagttcctggttatctaattgttgttcttattacaatttgttcttttgtaatccacacaaatatggctatgttggtgtgttgcggatttaagtgatttttttccatgtttctcatggttcctacactcaagattattttataaagcacattctaagatgtattgctggtattgtacttcaccatagtaacttctgctatcaatatattataattgttcaactcttttattatttttcctttcactttccctgatatattaccatgaacatttatattaagtatttgctcagagaacaaaatttatttattgtaagccattgtcagatgagctatttctaacatgtctatacttttaactcgtcttggcagatggcatttttggagcaatgatgaaggtacctctgaataaacatatgctgtaattgcctttttgtgctctattaccctttaagatgtaaattcaatacttttgcaggtttctttagtgaacgatggccctgtaacaatgcaagttgactcatcctcattgcaaaatcctgctcagtcaaggtgagctttcctaaatttgcgtgctcatgctcataaggacatggctgattttattcatttttgtgaatctttattagcaatggtgatgttggctcagttggggacaatgaagcacaagtacctaaagagacttcttaatctctgtaactggtcttctacccttcctgcacatgatttgaacatggttatcgctgtcccacatcaagccatgcagaattttgagtttgtttttgaggtttgagcaggaagaagccctccagtgagctcgtgccatgggtgctacaagtcgtgttttcatttctccacttaaatattgattactggggaaatatattagtattcatttcgtcttcaaagacatgaattttattactgatctgtcattcatacacaaatatcaaattgattcagttggcct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0242500, RefSeq:Os01g0242500