Os01g0251100

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Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0251100| Description = Similar to 50S ribosomal protein L3-2, chloroplast precursor| Version = NM_001049134.1 GI:115435681 GeneID:4327104| ...")
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Gene Name

Os01g0251100

Description

Similar to 50S ribosomal protein L3-2, chloroplast precursor

Version

NM_001049134.1 GI:115435681 GeneID:4327104

Length

4753 bp

Definition

Oryza sativa Japonica Group Os01g0251100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8290317..8295069

Sequence Coding Region

8290375..8290740,8291591..8291800,8292854..8292958,8294406..8294519,8294612..8294776

Expression

GEO Profiles:Os01g0251100

Genome Context

<gbrowseImage1> name=NC_008394:8290317..8295069 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8290317..8295069 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgtctcgaggggcctcctcgcgcgcctccgccacctctccatcgcgggcccacgcctgcccccttgctgccgccccttctccgccgagcccctcgtctcccaccccgacgacgacgacgccgccgccgggggcggcggcggcggcggcgagggatcgggagggggacggatcatagaggctcgggcgggggtgatgggcccggactcgcggcggaccggcgtgatcggcgtcaagtgcggcatgtcggcgatgtgggacaagtggggcgccaaggtgcccatcaccgtcctctgggtcgacgacaacgtcgtctgccaggtcaagaccgccgagaaggaggggttcttcgcgcttcagcttggagcaggccaaaagaaggaaaaacatctaacaaaacctgaagtgggccacttcagagcacaaggagtccctctaaagagaaaactaagggagtttcctgttactgaagatgcacttattcctcttggaacaacaatcacagttcgccattttgtgcccggacaatttgtggatgttactggaatcacaaagggcaaaggttttgcgggtggtatgaaaagacatggttttagtgggatgcctgcatcacatggtgcatctctatcacatcggagcatcggttctactggtcaaagagatgctcctggaagggtcttcaaaaacagaaagatgcctggacgtatgggtggtgtacagcgcaccgtgaaaaatgtatgggtttatcaaatagaccctgccaggaacttattgtatctgaaaggccaggttcctggtcctcaaggcagctttgtttttgttaaggactcaatatacaagaaacccgacatagctaagctgcctttcccaacatatttctcacaagaaggtgagtcggaggagctcctcgtcgctgatcttggtgacatcgacccattcatggtagcggattaa</cdnaseq>

Protein Sequence

<aaseq>MAAVSRGLLARLRHLSIAGPRLPPCCRPFSAEPLVSHPDDDDAA AGGGGGGGEGSGGGRIIEARAGVMGPDSRRTGVIGVKCGMSAMWDKWGAKVPITVLWV DDNVVCQVKTAEKEGFFALQLGAGQKKEKHLTKPEVGHFRAQGVPLKRKLREFPVTED ALIPLGTTITVRHFVPGQFVDVTGITKGKGFAGGMKRHGFSGMPASHGASLSHRSIGS TGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQIDPARNLLYLKGQVPGPQGSFVFV KDSIYKKPDIAKLPFPTYFSQEGESEELLVADLGDIDPFMVAD</aaseq>

Gene Sequence

<dnaseqindica>59..424#1275..1484#2538..2642#4090..4203#4296..4460#gcgtaaacccaccaccaccaccatctccagcctcgccgccgccgcacccgcctccaccatggcggccgtctcgaggggcctcctcgcgcgcctccgccacctctccatcgcgggcccacgcctgcccccttgctgccgccccttctccgccgagcccctcgtctcccaccccgacgacgacgacgccgccgccgggggcggcggcggcggcggcgagggatcgggagggggacggatcatagaggctcgggcgggggtgatgggcccggactcgcggcggaccggcgtgatcggcgtcaagtgcggcatgtcggcgatgtgggacaagtggggcgccaaggtgcccatcaccgtcctctgggtcgacgacaacgtcgtctgccaggtcaagaccgccgagaaggaggggttcttcgcgcttcaggtgctacgcgtttctgatctctgtgtgaactcttgtttcgatgacatcgcgagccagtggatcagctgagttcgtttcgctggaaattattaagtgctggggtcaaaaatgaaagtagtgtttcttcactcttccgttggagtcataataatttagagggagatttttcggcttccaagagtgttgaggttcgatttagacatgaaatgatatatactccctccgtttcatattataagcctttctagtattgcccacgttcatatagatgttaatgaatctagacagtatatgaatgtgcacaatgctaaagtcttataatatgaaacggaggaaataatataaatctgatcacacattgtagggcctctccaatacctggttggtaattcattgagatgtactgtaaacagtaactgaagcatatccctgcaaaagaaatgaaaaccatgtagcaattttctgcaaatgtctattcccgttgtggatagaaaaatgtgtagaaatgacaatgttgaaattttatagtagcattgttttacctctgaggccctgccacttccgaaattcatcacaacaacttatttatagatcaggcacctggttctgggattttggcatcaaggagtacatgtcttgtatttgctttacctgtagatgactcttctccaccgtgaatagttcagatacataacgtaataaacgtgtgctcttagactttattttattggcccaaacgtaaacttgttggtaaatctctagagttattgatcgttaactttggtccattgccttccattttgcaagatctgttcctaacttctggaactcttttcctggtatttatcagcttggagcaggccaaaagaaggaaaaacatctaacaaaacctgaagtgggccacttcagagcacaaggagtccctctaaagagaaaactaagggagtttcctgttactgaagatgcacttattcctcttggaacaacaatcacagttcgccattttgtgcccggacaatttgtggatgttactggaatcacaaagggcaaaggttttgcggtatgtattattttcctatctatgtttgttaagccagctttgttctgcatttaataatgtaaaaagagagcatcagcaatttgtgcatctacttgaaattgaattgtatggcgtaattccagctcatagttgttatctgattttgttccaaacaattacttacagaaatgcattgctgtgactctatatgtaactttctaataatgtaagcagcatttacttgtgtccctatcaattgttttgaacatgcaagcagataatgaacaccgctcattgttgaaattggaggtgcttctattcttcgaagtgctttaggacttacgcaagcccttggaagagctgaagtgtggaagtcattattagaatattgaccaattgtaataaaaaaaaccagtgtagttatatggtagatgaaaaatatatggtgttgtcacttttcagtcacagtgttcaatagttcgtacataatgtaattccagttactttgagttctatttaggtagctgtctagattcgtaatactaggaaatgtctcatccggtcctaggctcttatattttgagacggagggagtagttttttttttcctgcttgatggcttagcatatatactagaaaagcagagctaggtgagttaaggttgagaggaagcaatatagcaacttgatttacccttctctgagttgttattgtgctaatgataaagaaaagagttgtatagagattttaagaaccttcaggatctgtgcttggtatttggtaaaggctaactctaacagttggtcctggggacctttttaccacattaatgcaagttgttgatgattttcaatgtttaaggctttaatattaatttcacatttgactatattattgcaatcagatgtattaattttttttatttcatttgattaactgttcataataccacaatagcgtagcatccatgtttgcagttatttggatacttcagaatttcactttcataatccatttgtcatcactccacggtatgaatataagtcatttctttaacactttttccttgtgtagggtggtatgaaaagacatggttttagtgggatgcctgcatcacatggtgcatctctatcacatcggagcatcggttctactggtcaaagagatgctcctggaagggtatgtctcataatatccatgcactgaccacttgataattggtatacatttctcttcccagaagaggcaggtaattgccactatagaatacgtggcagcatagtttttaatagaactttcctgatataaggattaatcctgtataagtataactggcaagttatcccaatgcttaagttgatcaaaagatagtgcttcttacagttctctttttccacacttctaattattattccatcattgttcataatagttagtagattgcattgcatattctcgttactgttatggttatccagaaagcactatcaagtgtcaatttgtgccttttttttccacactactaattattattccttcattgttcataatagttagtagattgcgttgcatattctcgtcactgttatggttacccacaaagtgctatcaagtgtgaatatgttaacatagtaaatggcacatacatatagccaaaacaacagtacagccttatttaagtggagtttttattatgttgaactgataatgcccttcactggagatgcagacatacaagctaatgctttttacataaaattaaaatgcatcccaaatatttttagccgtttagcttaaaatggcttaaaatttgttaaaacaaaacaagggtatcttgatttgaatgaaactcaaatggttaaaaaaaaacggaagcagggcagctgcagctttcttcatctagctatctaggtatcgtttctaatggagagattgtttctcttcataaaaatgaattagaatctagatatagacaatgttgctgttgatttgactttatccttcccacctactactggcctcaacttcggtataccaactgctggcttcttaccaaagagttgccatttgatgtcccactgacatgtgagcctgggaacacatgttacttagaaatcctgtgatgagtcctagagtgcaacaacggagcagcaaatcatagattttcctacagcaatagagcacttcttccttgaatacgttcaagggaaaccctcggttggttttgtggtccttatgaatactccggttttgtgagagtgactcctaatggtgtgagtgagtgaattagtaaatgtgtggagcaaaagacaaataaaaccctgtaagaccttatatttttgtctaatgatatggcatcttcaaggtataacctgcagttagaagcgacttttctggtattttccctgagtgacgtcacttcaagacttcctgtgttactcttgggctgaacaaaatatttttttttccatatcataagcaaaagaaatgcagtggtttaaattatcatatgcagtttgtaatctgaagctgttggttggaaaacaatgaagtagttaactgaaagcagcctgcggcaagcattcttgcatatatagttggtaacattgctgtaatatgtttgcaggtcttcaaaaacagaaagatgcctggacgtatgggtggtgtacagcgcaccgtgaaaaatgtatgggtttatcaaatagaccctgccaggaacttattgtatctgaaaggccaggtagtttcatctgtacctttgaacttaatggtatgtcttgctgatgtatagaggttgatatgcgcaatatgtatttatcgtttattttgcaggttcctggtcctcaaggcagctttgtttttgttaaggactcaatatacaagaaacccgacatagctaagctgcctttcccaacatatttctcacaagaaggtgagtcggaggagctcctcgtcgctgatcttggtgacatcgacccattcatggtagcggattaagattagggcctactttggaagggtccttttgttttctgtgcacttcagcttgaccatccgacaaaattgttaaattttgcatggatatatgagtagttgctggattgcgagtcatcccattactggcccgcctctgatcaatgttgttccatgtacactacttggcaaatgtgccagggccctaactcgattagggttttgagctgattgtttgacaaaatggaacttttttgttcaataatttgtgtaatctaagcttcagatagatatataaaatgggaaagattcaccgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0251100, RefSeq:Os01g0251100