Os01g0253400

From RiceWiki
Revision as of 04:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0253400| Description = Protein of unknown function DUF1218 family protein| Version = NM_001049147.1 GI:115435707 GeneID:4327705| Length = 1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0253400

Description

Protein of unknown function DUF1218 family protein

Version

NM_001049147.1 GI:115435707 GeneID:4327705

Length

1271 bp

Definition

Oryza sativa Japonica Group Os01g0253400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8386569..8387839

Sequence Coding Region

8386793..8387216,8387302..8387771

Expression

GEO Profiles:Os01g0253400

Genome Context

<gbrowseImage1> name=NC_008394:8386569..8387839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8386569..8387839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggcggcgatgccggcggcggtgacgcacgacgacctgtcgctgcggaaggcgcaggagaggcgggcggcgcggtcgagcgggcgggcggcggtggcgctggtgtcgctctcggtgctctgcggcatcgtcggcttcatcctctgcctcgccgccgaggggtcgcgctccgaggcgtcgcactacctcatgaccgtcggcggcggcggcgccaacgcggcggcgaacaacgggcaggtggacgtctgcttctacaactccagcggccgggcgccgctggcgttcgccatcggggcgttcctgatgctcgccgtcgccatgttcgccgagcacgcctacatgctgctcgccgtcgccgcgccggactcgtccgcggcggggctcgccgtcgccgagggacacccgcgcgtcccctccgaccccgccaggctcacctggcagacctgctgcctcttcttcgtcacctggatctgcttcgggctcgcggaggtgatgctcatggtcggcatcgcggtggagtccggccacgtcagcgactggaggaagccgcgggcggtgtgccaccgggtgcgcccgggggtgttcgcggcggcgggaatcctgggactcatcaccgtcgtcgtcggcttcgtcgtctacgtcacggccctgcagacgaacaagctgcgggcgcagcaccccgtcggcggctactacgtcggccacggcgccccacacccgggcatgccgccgccgccgatgccgtacggcccgcacccgcacccacaccagccgccgccgccggcagcggcggcgacagcgccaagcgcgccggagatcacgccggccgcttgccaggtccagccaagccgagcggcgtgcgtcaccaagcagtgcgctgatgcagtttga</cdnaseq>

Protein Sequence

<aaseq>MQAAMPAAVTHDDLSLRKAQERRAARSSGRAAVALVSLSVLCGI VGFILCLAAEGSRSEASHYLMTVGGGGANAAANNGQVDVCFYNSSGRAPLAFAIGAFL MLAVAMFAEHAYMLLAVAAPDSSAAGLAVAEGHPRVPSDPARLTWQTCCLFFVTWICF GLAEVMLMVGIAVESGHVSDWRKPRAVCHRVRPGVFAAAGILGLITVVVGFVVYVTAL QTNKLRAQHPVGGYYVGHGAPHPGMPPPPMPYGPHPHPHQPPPPAAAATAPSAPEITP AACQVQPSRAACVTKQCADAV</aaseq>

Gene Sequence

<dnaseqindica>624..1047#69..538#gcaggcgaaatccttttgattatattcgttggtgtggttgagctcgtcggggtgagtaactagcatcgatgcaggcggcgatgccggcggcggtgacgcacgacgacctgtcgctgcggaaggcgcaggagaggcgggcggcgcggtcgagcgggcgggcggcggtggcgctggtgtcgctctcggtgctctgcggcatcgtcggcttcatcctctgcctcgccgccgaggggtcgcgctccgaggcgtcgcactacctcatgaccgtcggcggcggcggcgccaacgcggcggcgaacaacgggcaggtggacgtctgcttctacaactccagcggccgggcgccgctggcgttcgccatcggggcgttcctgatgctcgccgtcgccatgttcgccgagcacgcctacatgctgctcgccgtcgccgcgccggactcgtccgcggcggggctcgccgtcgccgagggacacccgcgcgtcccctccgaccccgccaggctcacctggcagacctgctgcctcttcttcgtcacctggtacgtcaatgactagtctaccgccattgatgacgccatgattggggtttcgaactaacgctcgatcgtcgctgctgcggcgcaggatctgcttcgggctcgcggaggtgatgctcatggtcggcatcgcggtggagtccggccacgtcagcgactggaggaagccgcgggcggtgtgccaccgggtgcgcccgggggtgttcgcggcggcgggaatcctgggactcatcaccgtcgtcgtcggcttcgtcgtctacgtcacggccctgcagacgaacaagctgcgggcgcagcaccccgtcggcggctactacgtcggccacggcgccccacacccgggcatgccgccgccgccgatgccgtacggcccgcacccgcacccacaccagccgccgccgccggcagcggcggcgacagcgccaagcgcgccggagatcacgccggccgcttgccaggtccagccaagccgagcggcgtgcgtcaccaagcagtgcgctgatgcagtttgaaacgagtagaagaatttggagattaagcagagacggtgatgtttaaaaggcatctactcttttccgcgtaacatgttctttcgtgatttgctatattagagcatttgatttgagttatttgcttgtatgtcacaccatttgtttttagcacaaacatgatttgaattgtaaagcacttgattcgtgattacatctcaacaagtttcaatttaatttacttggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0253400, RefSeq:Os01g0253400