Os01g0256900

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Revision as of 04:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0256900| Description = Similar to SmX6 protein| Version = NM_001049164.1 GI:115435741 GeneID:4326227| Length = 3676 bp| Definition = Oryza...")
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Gene Name

Os01g0256900

Description

Similar to SmX6 protein

Version

NM_001049164.1 GI:115435741 GeneID:4326227

Length

3676 bp

Definition

Oryza sativa Japonica Group Os01g0256900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8569860..8573535

Sequence Coding Region

8570119..8570141,8570238..8570393,8571017..8571059,8572604..8572681,8572952..8573050
,8573148..8573189,8573282..8573284

Expression

GEO Profiles:Os01g0256900

Genome Context

<gbrowseImage1> name=NC_008394:8569860..8573535 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8569860..8573535 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttccgctctcgctcctcaagaccgcccaggggcatcccatgctcgtggagcttaagaacggcgagacgtacaacgggcacttggtgaactgcgacacgtggatgaacatccacctccgggaggttatttgcacctcaaaggatggtgataagttttggaggatgccagaatgttacatccgtgggaacaccatcaagtatcttcgggttcctgatgaggtgattgacaaggtccaggaagagacttcaaagagcagatcagataggaggccaccaggtgtaggccgcggaagaggaagaggtgatataggtactaagcctggaggcagaggcattgggcgtggccaggatgatggtggcagcaaaggcggtggtggccgtggaaggggaggaattggaggtaaaggtggcatcaaaggtgggggccgcggacgtgggtga</cdnaseq>

Protein Sequence

<aaseq>MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVI CTSKDGDKFWRMPECYIRGNTIKYLRVPDEVIDKVQEETSKSRSDRRPPGVGRGRGRG DIGTKPGGRGIGRGQDDGGSKGGGGRGRGGIGGKGGIKGGGRGRG</aaseq>

Gene Sequence

<dnaseqindica>3395..3417#3143..3298#2477..2519#855..932#486..584#347..388#252..254#atttgggacacgtgtacataactctttcggtccgggaccctctcttgtttttcttcgttgctcgcgagctcttcccccctcgcctcgcctccccacccaacaagcccgcggcggcgactagggttttgaccccccggaatcccccctcctctcgccgcctccgcctccgccgccgccgccttcctccccgcgccggcgacgatctgctcctcctcccccgccggcatcgctgtttccggatctagcgcaagatggttcgtctctctctctatttctcaatctgtaccctctcgatccccaaattaatgcggccgtgtctgattctgtgtttgtgttgtggttgcagcttccgctctcgctcctcaagaccgcccaggggcatcccatggtaagagaagatccgccgcttcgcgctgtgcgtggtggttgtttggtttggtttctgatcggctagggtttgaaacttttgtgtggtttttttttagctcgtggagcttaagaacggcgagacgtacaacgggcacttggtgaactgcgacacgtggatgaacatccacctccgggaggttatttgcacctcaaaggtgaaatctcgcatccccgacccacttcgcttgtagattttagtggggacaaaagattagtggcattgtttggatttggggaaaatagggagtagccatttgttaaagtagtcttcatattttttttggaatttgacgtggagatagacagatagtaggaacttatagttcgaattgtgtgttctcttttgggtcatttggttccaattggtttgatcgtttagtttgtgatgaatgctgtttcctcattgtttatggttgtcattgcaggatggtgataagttttggaggatgccagaatgttacatccgtgggaacaccatcaagtatcttcgggttcctgatgaggtatggatttttaacatgttaaaccttgtttactatgtgcttgtggtttgctggttgtatgtttagacatgtatgttctccatctgcataatcagcctttttttttccctgttagcattcatcaccataattgctagcaaaatcactatgtcgtgtgcaatttttttgtggtcagctttcagtttcaagttttgttttcccttttagatctttatgggtgccagtgtgtctcttgttttgtctgagtaatctctcacgttagatatatgtaagttatttgatgccatttaagatatctgccttatggtgtttttaagtgatttgagcagatgaggacctctcttaagctaagcagagcattttaatatgattacgtgcaaatcactctgcattttatctgttaactatccacgaggggctgataaattttcttgatttcaaatcactgatatatgacaccaaacaattctcctgctatgaatagtgacaaaacttatgttccaactctgctgtacgcaaagctactttcccacagccaaggaacattgaaaatagttcagaacttcagataatggagaagtaaatatcacataaccgtgacctggatagtaggcctaagtatatatgtctcctaggtcacatcatatagatgtagctgactttacatcatatggatataaatgttattagtacttttaacccataaatctataagcaaagcacaaatgggaatgtattgagccaggatatgcccacacttgttatcaattctgaatttaaccagcctttcaatccctattctggaagtacaatcgaaaattgatatggtagaggtagaatactttttacccgatcttctggagttagacagccttttatccttattcttaatcttaagctgcatattttaccactgagattaagattaagaaacagacataaataggactattgtaccactgagatttagattgcattttcctcatgtgctggtttgagtaatcaaacaatcctacgatgagttggtcaattgtgggaccatcccacaatttagttggtttccttatttttctacaaaacttgatacttttgagggatgagatggagtggaccaacccattaacattcccaaccaaatagttaagttcagagttaggatcgtatggttcattcaccaactaattcctgaaatagaacagggccatcagttcatctcttgttagatatctcttgtgttcattttgttgtattactctttatttttatttttagaggtcaaatagctaattggatgttcttgatactacctccatcccaaagtatgagttttagggttgggcacgggtattaagaaagttggtggaatcaaatggggaaaggttgtgattgattgatttcgattgattatttttgtcttttcatgacattccagcatatgttatgtacttctgttttaccttcatgatgatgatgatgatacaccagcgttgtcattgttacctgtgctttccaatcctaaatgcatgaatttatttctatgacaggtgattgacaaggtccaggaagagacttcaaagagcagatcaggtatgtacccaatggttccagctgttataaatcacatttgtctctgtaattatttagatgttttaatattttctgtgaacttgatgaaatatttaaatcataattttgtgctattagttgcctttgcttgaaccttattccagttcattattggagaaaaaattgaccttattcagtttccaagagatgtattttgtcataacccataatttttattagtaagaagtacattatatgcggcagtgctatcagttgaatgtatgtggcagtgcaaatgcgtttatgcgtgcaagtagtaatgcgactgcagttcttttcttgggctggttcttaattttcaacaaacataacgtaacttatacttcaaaaattagcgatgaattgcatgtttacgctttacagtgtaaatagtatcaaatcaatctgtaaatgcacattgatacaggcagtatcctacatctatagtgttgttgatgtcattcatgaaaccctcgtgttcctcttttcttatatttggtgtattatggttattctgattttctgattactagagaatttcacctttttgaacatcttttgaagttaagttcaacgctgaattgcctatgctcttctaaatgcagataggaggccaccaggtgtaggccgcggaagaggaagaggtgatataggtactaagcctggaggcagaggcattgggcgtggccaggatgatggtggcagcaaaggcggtggtggccgtggaaggggaggaattggaggtaaaggtggcatcaaaggtatgcttcttgcttgaatttagactctactataccgccaaagtagtttgtattttgttttgaggggataaccaatctgcttgtactctatggcaggtgggggccgcggacgtgggtgagagggaaggtcacttgtgggaatgccgcttttttaaggctttgtgtcacatagattgctttaggagggtgaagaatggactggtggagtaagcattgctttgctttatcattttgtggtatgaccgaaaaatgtttcatgggttcagtagttaccagtgaagaggcagcggttggcctgtctcgaaacaatttgtttgatgtctggaccctcgactatattgaatattattgtggttattactttgacctgttcatcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0256900, RefSeq:Os01g0256900