Os01g0260800

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Revision as of 04:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0260800| Description = Conserved hypothetical protein| Version = NM_001049181.1 GI:115435775 GeneID:4325117| Length = 5683 bp| Definition ...")
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Gene Name

Os01g0260800

Description

Conserved hypothetical protein

Version

NM_001049181.1 GI:115435775 GeneID:4325117

Length

5683 bp

Definition

Oryza sativa Japonica Group Os01g0260800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8766808..8772490

Sequence Coding Region

8769854..8769932,8770181..8770224,8772086..8772247

Expression

GEO Profiles:Os01g0260800

Genome Context

<gbrowseImage1> name=NC_008394:8766808..8772490 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8766808..8772490 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagccgtcaagaggtctagctttctcctcgtcgtcgtcgtcttcgctttgctcctcctgacctccatggcagcaggagggaggaagatgttgatcaacaagcatcaagtgcaatcaatggagacgtctgatgatgaatccatgcatcaagggcaggaagacgacgaaatgctggcgatggtccacgagagaattctgaggcaggtgaagacgaacgactacgggacctacgaccctaccccaaccatggctaagcctcacgccaaggaaatacctaactaa</cdnaseq>

Protein Sequence

<aaseq>MGAVKRSSFLLVVVVFALLLLTSMAAGGRKMLINKHQVQSMETS DDESMHQGQEDDEMLAMVHERILRQVKTNDYGTYDPTPTMAKPHAKEIPN</aaseq>

Gene Sequence

<dnaseqindica>3047..3125#3374..3417#5279..5440#atccttctaatatataactgctaaattttgccgagatcgagcagttcagtgtgtctgtcagaggccttaatgtcgtcttgagcagccgccgcctggagatcaataagatctgatgttctgatcaagctgacgatacatatgtatttattcttctcaccgttattactgtatgcattttcttgttcctgaaactgctttctttaattttcctgaaagtttttcctgatgttgttttgttgtagaagtatttggattatacatgttttctggtgcatgcttgctcatatatatgtctgccgcccccccccccccccaccatttttttttgttcttttttccatattcaatgttggtaatggcgatatatggaaaaatatgtttgtctatatatgtacaacactatgaatatttaacatttgttccgacccatagtcctttttcgttgtttttctattcatattgcaacaatgtcaaccttatcactcacctatgggtatgtttggaaaatgggttagggaaatgttatcccaccctccaaagtataacttttaaccttagtcatacattcatctcatctcatttcatcccaatcttccattcatttccatttcctaatcccaccctttatagcccattatccaaaacacatcctaaattcttttatacatatattaaatcagtccctaagtttccggccatctatgaaaacttgttttggtcacctgcaaaaattgttttcgtagtagcgtataggcacaccttgtcccaacatatgtaccaagcactagtgcccactggccaccactagtgtatagctccatcatggccttcccaccgtcagaacaaacacttggattttttctgtcaggtttctccttaatttgctcgtttaatttggattcagagaggggtcagccacaccgacgattcaaattaatccaatctgcagaagttctgctatgactatttcgttggaggcaaccaagaaagagaagaaaattaacaagataaaaacgcgcatgggtaaccttgccgtccaaagaacgacaacattattattctgtttgtccataacgaaccatactgaaaaatgtaatttatctgaaacctgacaggtcatcatccacaagtcgactgaatttcaaatcctttcatcatctgaatcgtacttagtaccaatcaattgaataaacatatacaccatatgtgtgagactagccagattggtttccccatttctcaagcaagcacttgcgcaaatgaaatgcatctgtaccaacattatattacaacaaattaccaacattaattttatacttatcatgagcaatcctcatggtaattaagtatggtcaaaagtatagaactgtgacagcaattgcaagctttctgaaatatcatactgatcagagattcagagaggaagttagcaacattcagctttaaagcaaattggcctgcatctgcatcatatcatctgcagttcgatcagagataggatagagatgtgtgtattaaacctagacagactactactagtatatacttttatcatcttcaaaaaggaaaggttcagccatgatgcatggtgtctttattctccactagtgttagctccaattgtcctttcaacactattcctaacttagctagagaaacacaatattcccaagctggaaaagcagttccccactaacaaggcggccaccctcctttgatcaccttgttttaatttatgtaaagtcgtctttttgttttaaatactttatttcattgcccataatgttgacccctaactagctatagctgaatatttttttcttaacactgtcatatttgcatataattgtgtgcactccaaaaataaactatgctgaactatgactaaaagtagctggaaaagtatgctgtgaaaaaaaaatgtaactgaattagagataccataattccatgcccttgcatgcctgaaaagtgattagtcaggctttacttcgaacccccctcatagctcatcatagtttctacctcaaggtagctaacagtcaagtaaacttttgagttttgatgctcaccatgttgcatgcatgtctgccccatgtactatatggccatcaaacacccttacagagatctctgaacaatggccactcttgtccaaccatattacaaccatagacacaaaattatttaatttctaacagatttatttcactatattaatcgtaatctcttgttgtaatttgcacccacctgcacacacaagaatgatatgacaagaatatatgatgtgatgagcaaccactagccacaattacattgcttgcagggcattttccttttttttctaaaatacagcatgccatgattacactccaagctagacagcagattagtatatcagcttagattaactattcaattatgggggggactactatacctgcatgcatgcatgtagccgtacaagccacagtattagttgctttggcttatggggctagctaattaagctaaacatgctgcaccacaccagcaagcctaatgatgacagggccagctctgaagaagaaaaaaaagaattccataggccaattcaaagcactgaccattccctttaatcctgcctagcttttgataattaaaaataaataaacaccaggcaaacctgcactaggcaagcagggactccactactgagattcacacatccccatcatgcatatcatatcatctcatctcatatcattccatctctgaacaagagaaggagagatagaaagaagagaatattggaagaagaattaaataatagtactaacaatttgcagcaattctctggctctgcttctttgttgttgctgcagacaactcacatctgcaggttggttcctttgtgtccaaaccaaggaaaggaaaggcacagtcatctctctctctccctactcctcatctccagccacatctgctgcttcgtctccttctcctgagatctctcgatcttcaagaggaggaaacctaggtgaccttgctctctggtggccacgccatgggagccgtcaagaggtctagctttctcctcgtcgtcgtcgtcttcgctttgctcctcctgacctccatggcagcaggttaaccatctatctagctttttttttctttttaaagataatggatatataacccagcctttacttcaacagaagctatataacaccgatcatctagctggctagctaggttaatatatgttcagatcttgttacttttcatgttattttgattgttagtatatgcaagaagaaactgcaaaaaaaaattttgcgtgtttgccgatttcagtttcttttagtgattttctggggtttttttgacgcaggagggaggaagatgttgatcaacaagcatcaagtgcaatcaatggtatgtctatgactttatatttctattaattaatatatctaacaaaattacgatgcatgatctataaatctaacaaagttttattgttattatctaaagaaacaaagttgtatactgttagtcttccattgtactgaagcgaccggaaaatttgctgaatataccattaaggctttgattcttacgtgccttcagaacctatctgaccttgatttcagaagcatatgcatgcatacggctatagaacatgcagcacacgttgactaagtacaatatgcattatttttccaaccgagagaacgtacaggttttgtttgaccattatattcatgttcgatggattaatcctgataggacaattagttttgttttacaagttagaaactacacctcattcaaaacaagtctttgctgtcatgtcaattgtcatacagctaggtctacttccatatagggtaatattcacatacaaatatacccccacaaatgtatataatatatactactccctttgttctcattctaaaatgcgtgcagtcaaaccatgaattcgtaaatccttagaggatacaagtgtattatagttcgatatatgaaaatgattgataaatgagtagatttgttatgaaaattaaggaaacacagtttcatatgcatccagttatattttgaaaaaaaaatataattaaagaaagtaattataaaatatgtgcatttggaaacttatactatatgccgatgtgtctaaagcatcaagtaaaaagaacatactgctgggtcccggcaaaccaaagtgcctatacactactagtcttatttttaagtacaaccatatacacggtgaattcagtacagggctttacatccccttgatggcctatattaattacttcttcaaaaagagatgttatggaaattaaccttacatgcatttagttaccagcagctattggaaaaatatatatagcctagctgtcgatagatatgatgagtgcatataatctcaatatagatgttattactgactatgtttgtcactaacaagataggcaaacattttgcattggttcgtagtatatataaggcctgatatcaaagaaacttgcatgtggatcgctcaaggtgattagaccaagaagtgcgtgggtattagagctatacaatatgttatgtggattaattaggtcgaaccgttcgttcatagatatatctagttaggggtcatattaattcgaactttaggagtacatatatacaccctgaaatagctcacttaattaaagtgaaccagttatatatattgttgtgtcaacctgagtagtactactatttgcaaaatgttccaatgcactttttctaagataatgttccaatgcactctatcatgcaaatttttagtttaaggcctaccattttccatgtttaaatgatttattgtaaagtggtatacatgttaaacttgggataaaatgattcctactgttaaattaattaattaactacttagtaattaatatcccacgtgttgctgtagaaatctgtatgaacgtaatataggcaaattgcatgtgcccatgattggcatgatgattaatgttcagtgagtacaggcattgtcaaggaaaacaaaatatacatgctttcatatgcacacaaatgcatttttgcattaccatacatataaattaaattgatataaccctaactaatagtaatcatatttacatagaaagaagaatatcaatatatatatgagttataagaaaattaattaaattactgtcctgttaatgtcttaatctatatttgatagctaattcaatgtgtgcgtgcatgcatgtatgcatggaaattaatgcaggagacgtctgatgatgaatccatgcatcaagggcaggaagacgacgaaatgctggcgatggtccacgagagaattctgaggcaggtgaagacgaacgactacgggacctacgaccctaccccaaccatggctaagcctcacgccaaggaaatacctaactaactatatatatatagctgcatgcatgcatctcatatccataatccatgcatgcaaatatgtgatcaatatatatgtcttgcatatatatatgtggtcattaaattgcctcttcatcgagatatatttcgatatgttaattagtttgctacatataatatactactttgggccggccatatatatacatatgttttgtcgaataaacttcatggtttgtcatggaatgttattattcatatgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0260800, RefSeq:Os01g0260800