Os01g0263000

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Revision as of 04:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0263000| Description = Similar to Peroxidase 9 precursor (EC 1.11.1.7) (Atperox P9) (ATP18a)| Version = NM_001049190.1 GI:115435793 GeneID:4...")
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Gene Name

Os01g0263000

Description

Similar to Peroxidase 9 precursor (EC 1.11.1.7) (Atperox P9) (ATP18a)

Version

NM_001049190.1 GI:115435793 GeneID:4325127

Length

1791 bp

Definition

Oryza sativa Japonica Group Os01g0263000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8902578..8904368

Sequence Coding Region

8902578..8902999,8903370..8903535,8903785..8903976,8904105..8904368

Expression

GEO Profiles:Os01g0263000

Genome Context

<gbrowseImage1> name=NC_008394:8902578..8904368 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:8902578..8904368 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcatccaagactgttctttctgcaattttcactgcttctctgtgcttcactgtagctcttgctttccctgctcaccatgaggatcttcacccagttgtgcagagcccaccaaagccagttctttctccagattactataaggctacatgcccacaagctgatgagattgtggtctctgtcctaaagaaggctattgccaaggagcagaggattgctgcttctcttctcaggctcctgttccatgactgctttgttcagggatgcgacgcgtcggttttgttggatgacagtgaagaattcgtgagcgagaaaaaggctattcctaacaaaaattctattagaggatttgaagttatagacgagatcaaggctgcacttgaagaagcttgtccacacacagtctcttgtgctgacaccattgccctagctgcgagaggttcaacagttctgagcggtggcccatactgggaacttccactaggaaggaaggattcaaaggcagcatatatgaaattagcaaacaagaaccttcctccaccaaatgcgacactgcatcgtcttgtgaaattctttgaaaggcaaggactggataaggtggaccttgtggcactgtcaggaagccacaccattggaatggccagatgtgtgagcttcaagcagaggctctacaaccagcacagagacaaccagcctgacaaaacgctagagagaatgttctactccacactggcctcaacatgcccacgcaacggcggtgacaacaacttacgcccactggagtttgctaccccttcgaaattcgacaacacctattacaagctgctgatcgagggaagagggctcctcaattcagatgaagttctgtggacaggacgagacccgcagatcgcgggtctcgtcagaagctatgcagaaaacgaaccgctgttcttcgagcactacgtgaactcgataaccaagatggggaacatcaatcccctcactggttacgacggagaaatccgcaagaactgccgtgtggttaacaagaagatctag</cdnaseq>

Protein Sequence

<aaseq>MASSKTVLSAIFTASLCFTVALAFPAHHEDLHPVVQSPPKPVLS PDYYKATCPQADEIVVSVLKKAIAKEQRIAASLLRLLFHDCFVQGCDASVLLDDSEEF VSEKKAIPNKNSIRGFEVIDEIKAALEEACPHTVSCADTIALAARGSTVLSGGPYWEL PLGRKDSKAAYMKLANKNLPPPNATLHRLVKFFERQGLDKVDLVALSGSHTIGMARCV SFKQRLYNQHRDNQPDKTLERMFYSTLASTCPRNGGDNNLRPLEFATPSKFDNTYYKL LIEGRGLLNSDEVLWTGRDPQIAGLVRSYAENEPLFFEHYVNSITKMGNINPLTGYDG EIRKNCRVVNKKI</aaseq>

Gene Sequence

<dnaseqindica>1370..1791#834..999#393..584#1..264#atggcttcatccaagactgttctttctgcaattttcactgcttctctgtgcttcactgtagctcttgctttccctgctcaccatgaggatcttcacccagttgtgcagagcccaccaaagccagttctttctccagattactataaggctacatgcccacaagctgatgagattgtggtctctgtcctaaagaaggctattgccaaggagcagaggattgctgcttctcttctcaggctcctgttccatgactgctttgttcaggttagcacattttcaagtgtcctccttgttctaaaagaacacaaaatttctagaaggaaacacaattttcagtgttcactcattgatataaatgagaagtggttttgatcgtctcgatgaaatttcagggatgcgacgcgtcggttttgttggatgacagtgaagaattcgtgagcgagaaaaaggctattcctaacaaaaattctattagaggatttgaagttatagacgagatcaaggctgcacttgaagaagcttgtccacacacagtctcttgtgctgacaccattgccctagctgcgagaggttcaacagttctggtaaacatctctgctcttaaaattaaaaaaaaaaacttcattcatctgtttaaaatatagacttcattctttttcaagagaacacaataagagaatttctgaaagcaactacaatactttggttcatcttgtttggatgtagatgtatatataacactggcatttcaagtaaaaataatgtttctaacctcagtttaaaattatctaccacaagcatgatgaaatttaatggtttttatctcatgacagagcggtggcccatactgggaacttccactaggaaggaaggattcaaaggcagcatatatgaaattagcaaacaagaaccttcctccaccaaatgcgacactgcatcgtcttgtgaaattctttgaaaggcaaggactggataaggtggaccttgtggcactgtcaggtattgaattaattccacctcttcagtgttgaaactagattttttttgaggtaatgtagtaaaaaaaaatccggcggaataaaatagatttgtttgtacatgttctccacatcagtttcttgtcacatgtttaatctttcaaagtactgcaagaacctagaaaagatgagaaaaacactgaaacaaagcataactagcaatgaaatttgccagaaaattaagtgaacaacaaatataaggatagtgtagctctagtcatactgggataattaaaatgctaatccaaaccatcctcctgcattaacataattgaaacaactaataatatttttctcaccaaacaaatacatacatttttctgcattgacaggaagccacaccattggaatggccagatgtgtgagcttcaagcagaggctctacaaccagcacagagacaaccagcctgacaaaacgctagagagaatgttctactccacactggcctcaacatgcccacgcaacggcggtgacaacaacttacgcccactggagtttgctaccccttcgaaattcgacaacacctattacaagctgctgatcgagggaagagggctcctcaattcagatgaagttctgtggacaggacgagacccgcagatcgcgggtctcgtcagaagctatgcagaaaacgaaccgctgttcttcgagcactacgtgaactcgataaccaagatggggaacatcaatcccctcactggttacgacggagaaatccgcaagaactgccgtgtggttaacaagaagatctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0263000, RefSeq:Os01g0263000