Os01g0269800

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Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0269800| Description = Disease resistance protein family protein| Version = NM_001049234.1 GI:115435881 GeneID:4326269| Length = 3902 bp| ...")
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Gene Name

Os01g0269800

Description

Disease resistance protein family protein

Version

NM_001049234.1 GI:115435881 GeneID:4326269

Length

3902 bp

Definition

Oryza sativa Japonica Group Os01g0269800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9313115..9317016

Sequence Coding Region

9313115..9313312,9313476..9314209,9314913..9317016

Expression

GEO Profiles:Os01g0269800

Genome Context

<gbrowseImage1> name=NC_008394:9313115..9317016 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9313115..9317016 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagccgccgtggtgagctcgaccgagggcgtggtgcgcatcctcctggccaagctcggcgaattcctctccgacaagtacgtcctcctcagcggcgtccgccacgagatccaggagctcaaggacgacctcgagagcatgaacgcctgcctccgcgacctcgccgccgtcggcgactaccaccagtcccagcagactaggacgtggatgaagcaggtgagggaggtggcgtacgacgcggaggactgcatcgacagtttccggtaccacgtcggcggcgaccggaaccacgacgagggcctcctcgtcgtcgccggctggctgcgcaggacggcgctccggccgctgacgacgctgcgggcgatgtacaagctggccgtggaggtccagagcctcaaggcccgcgcgctcaaggtcagcgagcggaggctcaggtacaggctggagccgcccgccgcggcgtcgagctccggcgagtacgcgccccgctgctacgacgacctcgaccgtcgccttccggcgctcagcgtcgacgagtcccgcctcgtcggcgtccgcagcaagaccagagccatcctcaagctgctggaacacaaggacgacggcgacgacgacggcttggctcgccggaaggtggtcgccgtcgtcggcttcggcggcctgggcaagacgacgctggcggcgatggtgtacaagagcccggcggtgcaggggatccatcacagggcgttcgtgacggtgacccggagctgcaaccttcgcgccatgctggagtcgctgctggagcagctgttcgcgccggcgcgagatccacgctgctccaggaaggagatcatggccatggaaaaggatgaaatactcagaggcatcgaaaccaaggacattccccaactcctcgcccattgcagtactcatctgagcgacaagagatactttattgttgttgacgacttatggagtctggaggactgggcaagcttgaagccagcctttcccgacaatgacaagcatagtcgaataataatcactacaaggaaccgtcaggttgctgagagctgctgctcgcttcccggcgatcgcgttcacttcatggatgttctgccaaacgatcagtccagagagctgttcttcaagacggtgttccagaaggagcattgcccgtcggagtaccgaagcctggagggcatctccggtgacatcttgaccaaatgcggcggcctgccgctggccatagtcagtgtgggaggaatgctggcccaggcggagaacaagacgccggtggagtggacgaaggtgtgcggcaagctgggctccgggctgagcacgagcgcggcggtgagggggatgaggcggatactgtcgctgagctaccacgacctgccctaccacctcaaggcttgcttcctctacctcagcgtcttccgcgaggggtacgagatcaagcgggggcccctggtgcggcgatgggccgccgaggggttcgttggcggtgggcgggagtggacccccgaggaggccgccggcaagtacatagacgagttcgttggcaggagcatcgtcacacccactcgggtcgccaccaatggcgtggttaggtgttgtaaggtgcacgacatcatgctggaggtgatgacggccaagtgcgtggaggagaacttcatctccttgttggggagcgtgaccagctacgggcgtcaccaacataccgcggctacgacgactgggcatgacaagatccggcggctatctgtccatggctcccacatgccgcaggggcaacaatctaggagtggtggtggtgatgaggatatctttaggtttaggaggagaaggaagaagggcgagggcgagggtcaggacgacgtcttgtcgtccgtagacttgtcttgcgcccgctcgctgttgatgctccggtgcatcgagaaaccactgccatcaattagcttcaagcgcctaaagctcctcagggtgctggatctcgaaggttgtcgttggctaagcagccgtgaattggacgacatctgcaagctctccctcttgaggtacctaagccttagggacacaggcgtgcagcggctgccacggtcggtcgggagactgaaacagctcatgacactggacgtcagggaaaccgatgtgagggagttgccggagacgatcacccggctaggacacatgaggcatcttctatcaggcaggtacagatactacacaaggagccaccgtgtcaagctctttgagccatttgaggccatgacaataccacctggcttgagcgccatggagtccctccaaaccattgcccatgccaacgtcacgtcgagcggcatcgccatgggcgagttgggtgacctacctagcctaaccaagctctgcgtcatgaactgtgaaaaggggcctaacaaatggaagccattcattgtgtccctcaacaaactcagctactccctccgcagcttgtctatcctccactggttaaatgaggacgctggcctcgaggaactcctagatctagactcgccacccatcttcctcgagaagttcttcctctggggcaagcttagcatgttgcctccttgggtctcacacctcggcaatctggtcgacctctcgctccgagagaacttccttgatggcaaggaggtcatcgagcagctaggcaagctccctagcctcctctccctcaagctctactaccagtcatatatggggagagagctccacttccgggagaagctattcccgaggctcaagcagctgatcgtggacaatatgcccaaccttgatgagcttagcttccaaggaggcgcccccgagcttgagaggctcacgctcgccgtcctcaaggagcctgcagatggcatctccggcattgacaagctcccaaggctcaaggaggttgagttctttggccatgtcatcgtcgactccgtggtggagagcatggtagctgtgtgcaagaagcatcctaacaagccgagagtttacaggggagatcgaccaatggagatggactctgaattgtccagctga</cdnaseq>

Protein Sequence

<aaseq>MEAAVVSSTEGVVRILLAKLGEFLSDKYVLLSGVRHEIQELKDD LESMNACLRDLAAVGDYHQSQQTRTWMKQVREVAYDAEDCIDSFRYHVGGDRNHDEGL LVVAGWLRRTALRPLTTLRAMYKLAVEVQSLKARALKVSERRLRYRLEPPAAASSSGE YAPRCYDDLDRRLPALSVDESRLVGVRSKTRAILKLLEHKDDGDDDGLARRKVVAVVG FGGLGKTTLAAMVYKSPAVQGIHHRAFVTVTRSCNLRAMLESLLEQLFAPARDPRCSR KEIMAMEKDEILRGIETKDIPQLLAHCSTHLSDKRYFIVVDDLWSLEDWASLKPAFPD NDKHSRIIITTRNRQVAESCCSLPGDRVHFMDVLPNDQSRELFFKTVFQKEHCPSEYR SLEGISGDILTKCGGLPLAIVSVGGMLAQAENKTPVEWTKVCGKLGSGLSTSAAVRGM RRILSLSYHDLPYHLKACFLYLSVFREGYEIKRGPLVRRWAAEGFVGGGREWTPEEAA GKYIDEFVGRSIVTPTRVATNGVVRCCKVHDIMLEVMTAKCVEENFISLLGSVTSYGR HQHTAATTTGHDKIRRLSVHGSHMPQGQQSRSGGGDEDIFRFRRRRKKGEGEGQDDVL SSVDLSCARSLLMLRCIEKPLPSISFKRLKLLRVLDLEGCRWLSSRELDDICKLSLLR YLSLRDTGVQRLPRSVGRLKQLMTLDVRETDVRELPETITRLGHMRHLLSGRYRYYTR SHRVKLFEPFEAMTIPPGLSAMESLQTIAHANVTSSGIAMGELGDLPSLTKLCVMNCE KGPNKWKPFIVSLNKLSYSLRSLSILHWLNEDAGLEELLDLDSPPIFLEKFFLWGKLS MLPPWVSHLGNLVDLSLRENFLDGKEVIEQLGKLPSLLSLKLYYQSYMGRELHFREKL FPRLKQLIVDNMPNLDELSFQGGAPELERLTLAVLKEPADGISGIDKLPRLKEVEFFG HVIVDSVVESMVAVCKKHPNKPRVYRGDRPMEMDSELSS</aaseq>

Gene Sequence

<dnaseqindica>1..198#362..1095#1799..3902#atggaagccgccgtggtgagctcgaccgagggcgtggtgcgcatcctcctggccaagctcggcgaattcctctccgacaagtacgtcctcctcagcggcgtccgccacgagatccaggagctcaaggacgacctcgagagcatgaacgcctgcctccgcgacctcgccgccgtcggcgactaccaccagtcccagcaggtcagcccctcgccgtggcgtcgcgccttgttttttctttttcgcgaacgctaaaaagtattgcacgtcaacatattagaaaaagaaaagagtttttttatacaacgcaattggttcttcgtgttcttgaaatgatgaatcataggttttttttgggttgcagactaggacgtggatgaagcaggtgagggaggtggcgtacgacgcggaggactgcatcgacagtttccggtaccacgtcggcggcgaccggaaccacgacgagggcctcctcgtcgtcgccggctggctgcgcaggacggcgctccggccgctgacgacgctgcgggcgatgtacaagctggccgtggaggtccagagcctcaaggcccgcgcgctcaaggtcagcgagcggaggctcaggtacaggctggagccgcccgccgcggcgtcgagctccggcgagtacgcgccccgctgctacgacgacctcgaccgtcgccttccggcgctcagcgtcgacgagtcccgcctcgtcggcgtccgcagcaagaccagagccatcctcaagctgctggaacacaaggacgacggcgacgacgacggcttggctcgccggaaggtggtcgccgtcgtcggcttcggcggcctgggcaagacgacgctggcggcgatggtgtacaagagcccggcggtgcaggggatccatcacagggcgttcgtgacggtgacccggagctgcaaccttcgcgccatgctggagtcgctgctggagcagctgttcgcgccggcgcgagatccacgctgctccaggaaggagatcatggccatggaaaaggatgaaatactcagaggcatcgaaaccaaggacattccccaactcctcgcccattgcagtactcatctgagcgacaagaggtatattattgtctctgtctctgcctacttaattttcaactgaaaatgcttttggttggttgattgttttgttgccaaaattacattcagacagtttcatcttttcaaattttgataacgcatacaccctctatcttatactccctccgtttcaaaatgtttaacaccgttgactttttaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatatactttcatgtgaacatatagttttatatatttcacaattttttttaataagacgaacggtcaaacatgtgctaaaatatcaacggtgtcaaacattttgaaatggaggaagtagtagtttagatgaggaaatagtcgtcgaaaactattatagtagttattaggaggttggattctaatcacttaggggatgtcagaactttgtcaaatattttgagaatcttttactatccatgagcaactagtaggagatatcacacaattcctagtgtagatttggtttccatcggtatcttgctagtgttaagaaatctggaggtgctataaattaactaacatcagacaaagaaggtgcctttcaggatctcttcagaaaccgtaaaaatcacaatattataagtattaagtatgaatatgtaatgcattccttttcatgtgcagatactttattgttgttgacgacttatggagtctggaggactgggcaagcttgaagccagcctttcccgacaatgacaagcatagtcgaataataatcactacaaggaaccgtcaggttgctgagagctgctgctcgcttcccggcgatcgcgttcacttcatggatgttctgccaaacgatcagtccagagagctgttcttcaagacggtgttccagaaggagcattgcccgtcggagtaccgaagcctggagggcatctccggtgacatcttgaccaaatgcggcggcctgccgctggccatagtcagtgtgggaggaatgctggcccaggcggagaacaagacgccggtggagtggacgaaggtgtgcggcaagctgggctccgggctgagcacgagcgcggcggtgagggggatgaggcggatactgtcgctgagctaccacgacctgccctaccacctcaaggcttgcttcctctacctcagcgtcttccgcgaggggtacgagatcaagcgggggcccctggtgcggcgatgggccgccgaggggttcgttggcggtgggcgggagtggacccccgaggaggccgccggcaagtacatagacgagttcgttggcaggagcatcgtcacacccactcgggtcgccaccaatggcgtggttaggtgttgtaaggtgcacgacatcatgctggaggtgatgacggccaagtgcgtggaggagaacttcatctccttgttggggagcgtgaccagctacgggcgtcaccaacataccgcggctacgacgactgggcatgacaagatccggcggctatctgtccatggctcccacatgccgcaggggcaacaatctaggagtggtggtggtgatgaggatatctttaggtttaggaggagaaggaagaagggcgagggcgagggtcaggacgacgtcttgtcgtccgtagacttgtcttgcgcccgctcgctgttgatgctccggtgcatcgagaaaccactgccatcaattagcttcaagcgcctaaagctcctcagggtgctggatctcgaaggttgtcgttggctaagcagccgtgaattggacgacatctgcaagctctccctcttgaggtacctaagccttagggacacaggcgtgcagcggctgccacggtcggtcgggagactgaaacagctcatgacactggacgtcagggaaaccgatgtgagggagttgccggagacgatcacccggctaggacacatgaggcatcttctatcaggcaggtacagatactacacaaggagccaccgtgtcaagctctttgagccatttgaggccatgacaataccacctggcttgagcgccatggagtccctccaaaccattgcccatgccaacgtcacgtcgagcggcatcgccatgggcgagttgggtgacctacctagcctaaccaagctctgcgtcatgaactgtgaaaaggggcctaacaaatggaagccattcattgtgtccctcaacaaactcagctactccctccgcagcttgtctatcctccactggttaaatgaggacgctggcctcgaggaactcctagatctagactcgccacccatcttcctcgagaagttcttcctctggggcaagcttagcatgttgcctccttgggtctcacacctcggcaatctggtcgacctctcgctccgagagaacttccttgatggcaaggaggtcatcgagcagctaggcaagctccctagcctcctctccctcaagctctactaccagtcatatatggggagagagctccacttccgggagaagctattcccgaggctcaagcagctgatcgtggacaatatgcccaaccttgatgagcttagcttccaaggaggcgcccccgagcttgagaggctcacgctcgccgtcctcaaggagcctgcagatggcatctccggcattgacaagctcccaaggctcaaggaggttgagttctttggccatgtcatcgtcgactccgtggtggagagcatggtagctgtgtgcaagaagcatcctaacaagccgagagtttacaggggagatcgaccaatggagatggactctgaattgtccagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0269800, RefSeq:Os01g0269800