Os01g0270100

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Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0270100| Description = Similar to Cysteine protease inhibitor| Version = NM_001049237.1 GI:115435887 GeneID:4326272| Length = 3633 bp| Def...")
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Gene Name

Os01g0270100

Description

Similar to Cysteine protease inhibitor

Version

NM_001049237.1 GI:115435887 GeneID:4326272

Length

3633 bp

Definition

Oryza sativa Japonica Group Os01g0270100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9324655..9328287

Sequence Coding Region

9324899..9325051,9325405..9325550,9327627..9327846,9327956..9328189

Expression

GEO Profiles:Os01g0270100

Genome Context

<gbrowseImage1> name=NC_008394:9324655..9328287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9324655..9328287 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcgttgctgcgacgacgcggcccgcctcctcctccgccgccgctccgctccccctcttcctcctcctcgccgtcgccgccgccgccgccgccctgttcctcgtcggctccgcgtccctcgccatggccggccacgtcctcggcggcgcgcacgacgccccctccgccgccaacagcgtcgagaccgacgcgctcgcccgcttcgccgtcgacgagcacaacaagcgcgagaacgcgctgctggagttcgtgcgggtggtggaggcgaaggagcaggtggtggccggcacgctgcaccacctcacgctcgaggccctcgaggcggggaggaagaaggtgtacgaggccaaggtctgggtcaagccgtggctcgatttcaaggagctccaggagttccgcaacactggggatgcaaccaccttcaccaacgccgacctcggcgccaagaaaggtggacatgagcctgggtggcgtgatgttccagtacatgatcctgtagtcaaagatgctgcagaccatgctgtgaaatcaatccagcagaggtcaaactccctgtttccatatgaacttctcgagatcgttcgtgcaaaggcagaggttgttgaagacttcgcaaagtttgacattctgatgaaacttaagaggggaaacaaggaggagaagttcaaagccgaggtccacaagaaccttgaaggggcatttgtactgaaccagatgcaacaagagcatgatgaatcgagcagccagtga</cdnaseq>

Protein Sequence

<aaseq>MRVAATTRPASSSAAAPLPLFLLLAVAAAAAALFLVGSASLAMA GHVLGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHL TLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFTNADLGAKKGGHEPGWRD VPVHDPVVKDAADHAVKSIQQRSNSLFPYELLEIVRAKAEVVEDFAKFDILMKLKRGN KEEKFKAEVHKNLEGAFVLNQMQQEHDESSSQ</aaseq>

Gene Sequence

<dnaseqindica>3237..3389#2738..2883#442..661#99..332#atccccgttcgtcgcaaagagagaaaccccccgcacgaagcaaagaagccgcaaccgcaagccccaagagcgaaaccgtaacgaagggaaagtttgggatgcgcgttgctgcgacgacgcggcccgcctcctcctccgccgccgctccgctccccctcttcctcctcctcgccgtcgccgccgccgccgccgccctgttcctcgtcggctccgcgtccctcgccatggccggccacgtcctcggcggcgcgcacgacgccccctccgccgccaacagcgtcgagaccgacgcgctcgcccgcttcgccgtcgacgagcacaacaagcgcgaggtgaagccccctcccccccccctcccccctccctctctctcgcttcctccccagtggcgattttgtgggtactgaacttgtgagggttctctgggtgtggtgcttgcagaacgcgctgctggagttcgtgcgggtggtggaggcgaaggagcaggtggtggccggcacgctgcaccacctcacgctcgaggccctcgaggcggggaggaagaaggtgtacgaggccaaggtctgggtcaagccgtggctcgatttcaaggagctccaggagttccgcaacactggggatgcaaccaccttcaccaacgccgacctcggcgccaagaaaggttttcgctcccactgatctcgcctgtcgcctgcctctaatctttgcttgttttgagatattgcgtgcttgctcgcacgctagcttgtgattctgcgaagggaggggattgggcatgggtggtgatgacgaggtgtatgtagaaatgcctagtcatctatggaatagtttcgttggaaaaaaaaacgacagtgtagagtcgagatcatcgactgggaatgagtgacggttgggttctcaatttcttgcacaaggaattgccaacatttccacaatcatataaatgttgacaattatacaacatttctacatgtatagcttgaaatacatttctactgggaataagtgacggttggattctgtgatagcttggaatttgacaactcacagcggcaggtgactgtattcttgtcatcctctgttaaaaacctcttttactgaatttagatagctgtggcatggttaatggtttgctgttgactccatttagttaatagtgatctgagttgttgttaccaagcatttgattctacatacagagagcacaagttgtaacgtgtgaagctcaacctttatgtttttgtttagtttcttattttgtttgttagttacacattcatgtctagttgagtttgttatatgtgccctgttgaacttaaaaggtaattagtccaaaccttagttttcttcttcttatatttttttgaaaaagttcttcttatgtttggtgggtataacttggtagatcaattttatgctgctgggttgcgtagttatatatttgaacatcctgcgtaagctgatccctgctaatatgtccttctaaaactttggcatgccatgctcgatctatattctggtgacatacccctgctcgatttctattttggcatgacatgctcctgcctgatctctatattcactctgctatgctgcttgaacagccgcccaatcatggcggcatgtgtatgttcatgctttaccaccttgtctgtctgaacaaactattacatgaatcccatcagattgatgcaacacctcactgcatgagcatgagtgcatgacgatttgattacatttgcttgcctatcaccacacacaccctgtatgtctgcatcataatcccactattatgtttcaatattgcattatcacctaatgtatcattgggtggtactggtatatttagaagaacttatgtagatgtaaaatttcatgagaaaataatattcacaacatacagtgtctagttagtgcattctcctgttttattgcttgtagaattctattatagggtacctgtgataatgtttgttttgcattcatgtgagctgcagcggactgggcataatctcatttgtagcatggatagcagtagcattacatgcttatatttatatagtgcattttgaattccaatcagatcaccacaccagctagaaagagtgctcaaggattctcacactaattatttgtttgagtgttagaagttttgctgtacgtctatatgtttatgtcagttcttcataagctagtttcagacagcagaatgttacacctgtgccacaggggttaaagcaaaagaagttcctccccttctggcatatttgttcataagaatttgcattccataatatttttgagggagggaagaggtgtgcccagcatctacaggtagtaaagacatggtctaattatattgtatttgtaagagtgtaattaccataatcatgctaaactgtgaacaaatgggcataattacacactatccatgcatatatcaaatgctgacatgatgccatgcaagcctggtgcctggttttccttctaccagtttaaagagggttgagcaccccaaggcacactatgcatccttctacctatttgaatatgttttcctttcagtgaaacgtggcagatgtcaatgtcaacacatatgatacaaagtggctaattagaatgtgatagtttcttcatgtgccaattcatggatgttgaaagttgatcacacacttgtgctgtatatgagatattgttataacttctaaacctgatattgaactcaatgaaatttcaggtggacatgagcctgggtggcgtgatgttccagtacatgatcctgtagtcaaagatgctgcagaccatgctgtgaaatcaatccagcagaggtcaaactccctgtttccatatgaacttctcgagatcgttcgtgcaaaggcagaggtcagctattgtgaattcatccatccaaagattatcttttcttttttgtatctaatttagtaatgctgagcttatagttcacttaggcagcgttcgagagggtgagagagtgagtttgtttgtttcgttttccgcgcgcacgtttcccaagctactaaacggtgcgttttttgcaaaaattttctataggaaagttgctttaaaaaatcatattaatccagttttgaaatttaaaatagttaatactcaattaatcatgagctaatagctcacctcgttttacgtatcttcttaatctcctcaatccccttctcctcaaacacacccttatttctgatatggttatcaatcaggttgttgaagacttcgcaaagtttgacattctgatgaaacttaagaggggaaacaaggaggagaagttcaaagccgaggtccacaagaaccttgaaggggcatttgtactgaaccagatgcaacaagagcatgatgaatcgagcagccagtgaaccttgccacattaagctgtagttatgtagtttgtgttcaataagaaaacagtgaacatgcacccttccgtttctatcgggacataggctggaacttgttcctaacatcgatgaaaagaagacactacactatccttttgttcctgttgctcttagtgtgataatacgatactggtcgtgtaacttctcaagggaaccgtgggtctatgccatacagcttgtgaatgtgaaatcctatgttgat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0270100, RefSeq:Os01g0270100