Os01g0271000

From RiceWiki
Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0271000| Description = Conserved hypothetical protein| Version = NM_001049240.1 GI:115435893 GeneID:4325165| Length = 2974 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0271000

Description

Conserved hypothetical protein

Version

NM_001049240.1 GI:115435893 GeneID:4325165

Length

2974 bp

Definition

Oryza sativa Japonica Group Os01g0271000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9369583..9372556

Sequence Coding Region

9369742..9369763,9369800..9369837,9369912..9370049,9370476..9370731,9371533..9371610
,9372185..9372324

Expression

GEO Profiles:Os01g0271000

Genome Context

<gbrowseImage1> name=NC_008394:9369583..9372556 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9369583..9372556 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcctcggcgcctcctccggcggcgacgaatccaccggcttcgaccgcgcccacggaggacggggaggtggaggagggtgccacgccaccgagaacttctgcgttggggacggcgaactggggtaccgccaccctcgtcggcgtcttcgccgggctgctctacggcgggagcaaggaggccagcgcctctgtcagcaaagacgctgaagtgatgttgaagatggggagcaccacagacaagcgtgagcagtatagattgatgagagatgcaatggagaaaagattcatccgggttgccaaaggatcgctagttggtggtgttcgccttgggatgtttactgcaactttctttggcatacagaaccttcttattgagaaacgtggggtgcatgatgtatttaatatagctggagctggctcggctactgcagctgcatttggacttatattgccaggttcaccaatgtggcgtgcaaggaatgtattggttggatcagctcttggtgctggagtctgctttccccttggttggatacagttgaagctggcagagaaagccaatcttgagatggcaagttcgaaaccaacagatttggtggaggaacaaggtaatcaaagcggcgttggtgccgctatagaacgacttgggcgcagcctaaagaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAASAPPPAATNPPASTAPTEDGEVEEGATPPRTSALGTANWGT ATLVGVFAGLLYGGSKEASASVSKDAEVMLKMGSTTDKREQYRLMRDAMEKRFIRVAK GSLVGGVRLGMFTATFFGIQNLLIEKRGVHDVFNIAGAGSATAAAFGLILPGSPMWRA RNVLVGSALGAGVCFPLGWIQLKLAEKANLEMASSKPTDLVEEQGNQSGVGAAIERLG RSLKK</aaseq>

Gene Sequence

<dnaseqindica>160..181#218..255#330..467#894..1149#1951..2028#2603..2742#attccccttcctcatctccgcctcgcctccaccggccgtgatctcgccgccggcgccgccccgccgcccctgaggcctactagtagcgacctacaagtaccctgttttgtaccatcctaggagcgaatcctccccctgcggcagcggtagcagatcgcgatggccgcctcggcgcctcctccggccgagccgccgccgccgccggcggcggcggcggcggcggcgacgaatccaccggcttcgaccgcgcccacggtctgtatcgatccctcgtgcgtattcgtctggcgcccgagttctgacgtggttgggtgtgggcgatgatgcaggaggacggggaggtggaggagggtgccacgccaccgagaacttctgcgttggggacggcgaactggggtaccgccaccctcgtcggcgtcttcgccgggctgctctacggcgggagcaaggaggccagcgcctctgtcgtaagttgctactctactctatccgcctcctgctttctatcattggctctgtatgataaattgcgtgaaattaaaaacaatttgaacaaatgaatggccaccagatggaagatatgtggttgcatcgactgataactattttattggtcttttgatcacagctcacagatcatttagacctgaaattgtagagctagagcagaattgagaaatttcctttttatcgaaacaagctaccaatctatataaccaagtgggtactaaccattaaggtctcctttagaactgggattctagaattttgattaagataattaaccatgtccctattttgaggtgaacatttatatccttttttcctgaactccttacaccaaataaaatgaaatgtcttcagttacaacattattgtgctgtattttacagagcaaagacgctgaagtgatgttgaagatggggagcaccacagacaagcgtgagcagtatagattgatgagagatgcaatggagaaaagattcatccgggttgccaaaggatcgctagttggtggtgttcgccttgggatgtttactgcaactttctttggcatacagaaccttcttattgagaaacgtggggtgcatgatgtatttaatatagctggagctggctcggctactgcagctgcatttggacttatatgtatgtatctcttcatgtccagtttatacttttgtttagatggtggaaattttggtcacctcaaataatttgaagtgagcttatgaaatatgtttgtgatactgtgaagcctgaattgcattcaaatattcaattactgattgtaatagaataagaatagccccagtcatgttttgaaagaaaaatgacatatttttgaagaaaacgaggttatcatgtacccgtaatatgtatgtaattcagtatagacaatcttgtgtcgtaagtactattattttggggaaagtcgtctgttgtagtcatctaccagaggttctgaaggttagtaggttatattacttgtcttcctctataaggtttgcttcctttataggccttctaccgctgtgagcttctaggtcctagccatatgatacctgaaaatctgattggtggaatagacttgctaagatatatagccctacttggatttttctgtcaccatgatgtgctcgattttttcccctgtaccttgaaggatgtagattaatgtaagaagctcttaaaataggttccttgaatatctaataaatcctgttatctttgactttggttttcaatctgtgtgctcagaaattattactacctgtcagggttaattgtgatctcattgccacatgatatgatgagataaatcattgttttatgatattgtttgtattttagttctgattctgctgtgcaaatagttggttaacttcattaactaaggtagccctcagcatccttagtttatcttaactgatgatcgttcatcttcagtgccaggttcaccaatgtggcgtgcaaggaatgtattggttggatcagctcttggtgctggagtctgctttccccttggtattactctactttctattcaccaatgaaaaatggtcattttagttcactcgaacatgcacatcacttgattgaatatggtcctgataagctgaataactgatatttagtgtgttccctggtagtactagattgaatcatgtgaactcaatctatgctttaacaactttgagagtacatttaattgcaggactcttggacatagttgcatttcatgttgggcaggatgcatttccaaattggtagttcttcagcttatattgcctactgatggattaccatcgcttagccctgttcatcttcagcgcaagggtgctcgatctttctataaacttatgaacagtctcaatgaggtttgattgggatttgggacttgggaatcatttgccaagccatttgcatataagaagtgcatttagcatttgcatataagagctactactagcacactgtcatcaattgccaagccaacaactttatgcttacacgatgaccgtgctgtgctgacacattctaggatgctggtagcttgattttttgttcaataagtcagccttaaggaattcttttacaggttggatacagttgaagctggcagagaaagccaatcttgagatggcaagttcgaaaccaacagatttggtggaggaacaaggtaatcaaagcggcgttggtgccgctatagaacgacttgggcgcagcctaaagaagtaaaaatttggaccatcgaaggaccttttttttttctcataatctgtgtgcgttcctgaagaccgcaggaggaacctgtttcatgggctgcactacttcaattttttcttctttcatgtgcctcacgctgtagtgctgtcaaactttgaagcagtaacagcaagggccacacggagcctccgttgtgggggaaaaaagagcatttttgataaaaatatcgtattcgttggatgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0271000, RefSeq:Os01g0271000