Os01g0272600

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Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0272600| Description = Conserved hypothetical protein| Version = NM_001049245.1 GI:115435903 GeneID:4325171| Length = 4634 bp| Definition ...")
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Gene Name

Os01g0272600

Description

Conserved hypothetical protein

Version

NM_001049245.1 GI:115435903 GeneID:4325171

Length

4634 bp

Definition

Oryza sativa Japonica Group Os01g0272600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9423512..9428145

Sequence Coding Region

9423590..9424021,9424634..9424701,9424959..9425157,9425329..9425426,9425519..9425588
,9425707..9425778,9425928..9426041,9427666..9427731

Expression

GEO Profiles:Os01g0272600

Genome Context

<gbrowseImage1> name=NC_008394:9423512..9428145 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9423512..9428145 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgcggcggcgcggaaggccgccgccgcggcgcggctgccggcggcggtgctggtggtggtagcggtgggggcgttcctgatctcctacaacctcctggccatcgtgctccggggtggcggcggcgcggccaccggggcggggagggagagggacccggtggtggcgatgccggggtggatgcgggcggctgggtcggcgggcggggggcggcggcggccgttccacgtggcgctcacggcgaccgacgccgcgtacagccggtggcagtgccgggtgatgtactactggtacaagcggatgcaggcgcggccggagggcgccgacatgggaggcttcacccgcgtgctccactccgggaagcccgacgccctcatgggcgagatccccaccttcgtcgtcgaccccctccccgccggcaaggaccatggctatgtcgtactaaataggccctgggcatttgtacagtggctggagaaagcaaagattgaagaagaatacatattgatggcagaaccagatcatatatttgtgagacctttaccaaatttagcccgcgatgatccagcagcattccctttcttttacattacaccatcagaacatgaaagtgttctcaggaaatattatcctaaagaaagaggccctgtcacaaatatcgaccctattgggaattcccctgtaatcattaagaagatacaacttgagaagattgcccctacatggatgaatgtatcgattcaaatgaaagaagatcaggagacagataaagcttttggatgggtcttggaaatgtatgcatatgctgttgctagtgcactccatggggttcaacatatccttcgaaaagatttcatgattcagccaccttttgataccaaacttgggaatacatttattatccacttcacttacggatgtgactatacactcaagggtgtactaacctatggaaaaattggtgaatggagatttgacaagagagcataccaagacaggccaccgccacgaaatcttacattgccccctccaggagtaccagaaagtgtggttacacttgtaaagatggtaaacgaggctaccgcaaaccttccagggtgggatgatggaagatag</cdnaseq>

Protein Sequence

<aaseq>MNAAARKAAAAARLPAAVLVVVAVGAFLISYNLLAIVLRGGGGA ATGAGRERDPVVAMPGWMRAAGSAGGGRRRPFHVALTATDAAYSRWQCRVMYYWYKRM QARPEGADMGGFTRVLHSGKPDALMGEIPTFVVDPLPAGKDHGYVVLNRPWAFVQWLE KAKIEEEYILMAEPDHIFVRPLPNLARDDPAAFPFFYITPSEHESVLRKYYPKERGPV TNIDPIGNSPVIIKKIQLEKIAPTWMNVSIQMKEDQETDKAFGWVLEMYAYAVASALH GVQHILRKDFMIQPPFDTKLGNTFIIHFTYGCDYTLKGVLTYGKIGEWRFDKRAYQDR PPPRNLTLPPPGVPESVVTLVKMVNEATANLPGWDDGR</aaseq>

Gene Sequence

<dnaseqindica>79..510#1123..1190#1448..1646#1818..1915#2008..2077#2196..2267#2417..2530#4155..4220#gttaattattcgcttccctcgcaagggaggaggagacgcgccgcccctcgaatccaaacccccaaaattcccagagagatgaacgcggcggcgcggaaggccgccgccgcggcgcggctgccggcggcggtgctggtggtggtagcggtgggggcgttcctgatctcctacaacctcctggccatcgtgctccggggtggcggcggcgcggccaccggggcggggagggagagggacccggtggtggcgatgccggggtggatgcgggcggctgggtcggcgggcggggggcggcggcggccgttccacgtggcgctcacggcgaccgacgccgcgtacagccggtggcagtgccgggtgatgtactactggtacaagcggatgcaggcgcggccggagggcgccgacatgggaggcttcacccgcgtgctccactccgggaagcccgacgccctcatgggcgagatccccaccttcgtcgtcgaccccctccccgccggcaaggaccatgtacgcaagcgatcaaaccaaattctctctctctctctcgtttcatcagttttgtctgttgcgcaatgtgggggcagtggcattgtggtccagcaggtgttcagaagaacacatgtgcttgtgaattttagacgggactaagtttttttttccccttcattttttggatgaaaatgaccgcttctatgcaactcttaatgacaaaccgaatgttcttttttacaacattatgatttgagaacagcttccggatagatagtgtctgtgaatttcggcaagaagattgcgtgagaagtgaacagtcatggcttacttttcaatggtacttcacagaacaataatatcataactgaaggttttcttcagttttctgacccacttgtctgaacttatgcctccttttcttgccttcccatgtgggtactattctctgttcggttgtacattgaatttgcttgttgtgtttgtgtgtgtgtgttttatgaggatttgtggcgtgttttacttttgtacgcaactatttgcgccgaaatcactttgcagagtatacatacatgatcagtcaatttggtaactgaccaaacttttttttttgttttgaattgtttgcagggctatgtcgtactaaataggccctgggcatttgtacagtggctggagaaagcaaagattgaagaagagtgagttaaaatttatctgccatttcgttgagttactttatttgtggttttgacatttaaccttactctgatggacacttggacgcatatctagaatcccaacatgcatgatttaacaacatgtgaatagcttaattattttcttggtgttgggttttgagatgaagaacattgttggcgttggtaatttatttgtgctaaaataatgtggatgttctgatgtgttttcaattttctgttttgttgaaacatggcagatacatattgatggcagaaccagatcatatatttgtgagacctttaccaaatttagcccgcgatgatccagcagcattccctttcttttacattacaccatcagaacatgaaagtgttctcaggaaatattatcctaaagaaagaggccctgtcacaaatatcgaccctattgggaattcccctgtaatcattaagaaggtaacacatattgcagaattgacgtggtataccttgaagtctcatgcatgaggagtatttccttggattttatttttacattacttacatgccagttgctagttattaatgttttgaattgatgagcttcaatttttaactctatcccttatcatctgaggaaacttttagatacaacttgagaagattgcccctacatggatgaatgtatcgattcaaatgaaagaagatcaggagacagataaagcttttggatgggtcttggaaatgtgagaattacgcttgtgtatattttcataatgcatttacttgcttgttacattgttatgattccaggttcttgtttttacttgacttctaggtatgcatatgctgttgctagtgcactccatggggttcaacatatccttcgaaaagatttcatgattcaggtgctctacttgtttatgtttttttgtcaatgcttgacaacagacttgcctgacttcagagtagttgtgttgagtttcatgatgagagtgctattgatggtccagtaaaaatttgcagccaccttttgataccaaacttgggaatacatttattatccacttcacttacggatgtgactatacactcaaggtattgaaatcccagatctgtgatgtttttctacagatataaatattcatcggaagctaaaatttctgaggcgataaagtaaagaagtcactattgtttttgttttgctaacataatgtaattgacattacactggcaaatgatttcagggtgtactaacctatggaaaaattggtgaatggagatttgacaagagagcataccaagacaggccaccgccacgaaatcttacattgccccctccaggagtaccagaaagtgtggtatgtttactagcaaattaatttgtaaaatacaaaattttcattatgtcgtaaaagaaatattgtaacctttaagatgttaaggtgttattagtgtcttgtattttttagtataatatagtcttgctagtacaaaacacaacgttttatttttgctagacagaaaaatattttttctcatttaaattaattcagatgccatgttaatacactagagcaatgcttcactggcactgttttattatataactcaattgttatctgtataatttcctccttaacccaattatttgtaagatattgtaattggcataattttgatttatatgattgattgcatgatggtcttggcataaattgtccttttgcttgggcttagaagtcagagtggtttgccatctttttcctttcaagtgccactttgagtccattgatggtggcatccactctggaagtttgaatacataattaagttgcttacacaatgctggcacattgccatcatcagcaaatactaaactatgtgattcccgtgtcaagttcatcacccaattttctctcttcctttccaacatgatcattaactacttgttagctagatttcttagcttatatgcttacatctgagtactgcacaaattttaaagcacaacagtacccagctagtaaattgttacataaggagtattagtatatcacatatgaaccatgtgtttttttcatgtacggtgggttcatgtggcttggaattgtccttttacctaacaaattgttgttagcattactttatttatgccaatcctgaataattgtgtgaacagaacaataggagaagtgcataatgataactattggactggccatatggcttacctgaataatgttatacataatctaggatgtaggaaaatatggtagggaagttatctatgcattagagtcaatcgatgtctaactttagtactcctacataaattcatgatacaattcaaacactgcaaagatgagtatccaatatactaagaaaacttctcagcagcaccctcaaaaccccagtttaccccattcgtaccagatcctgtctggcactgacaattaaatacaaggccctgcaaaaactgtgtatgccaaatgaatgtgtcccagggtctacagaaaatgtgctactggtgcagcttccgaaattcacctttattaaactgggcgaagatgagaagtgttccaaaggaatgcaatatatgttccgcagcaaaactgcaaaatgtacatatcttttagttgtttaagatgttctgcggattctgatagaaaatatccagaaaatagatgcttcatgcatttttttaatttttctaagttgtctgctgacatttgtttgatttattccatggtcaagttgggtttctggctcagattttttagttgatattcttgaatttacaaatgctactcccagtagctggcgttgttcctataaaaaagaatagctaaaatggtgttgcactaacaagggttaatatcatgcttgtgaaattgtaccattatcctgtttgcgaaaagtctctgagaattcaggtttcatgcttttatttttagccataacctatatattttcttaatgcaggttacacttgtaaagatggtaaacgaggctaccgcaaaccttccagggtgggatgatggaagatagactatgacgacaaatgttgctgattagtgattactcattctgatagctgccccattcctctctattcaggggcaatacaccataaatgatagaaatcgatagttttcccagtatacttacagaaagaaaacaagatagcagcccaaaagtttttttgatgaaattatatcgaaatgctactagtataaacacctaaagtatagttatgccagtaaaatggtgattgcacctctgacatctctatagagttactgagcatatgttgatctgttgtccaattgtttgttcgaactataccgctgtgtaaatagtgaactgtagcttattggcatgcaaacaatgtttgcgaatgccaaagttaaatatcgcctatataatgtcaataaaatacaatggtttagtcgttcgttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0272600, RefSeq:Os01g0272600